Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0775300 Oryza sativa ssp. japonica HOM05D003064 ORTHO05D001733 3.9e-55 218.4 156 100.0
Zm00001eb256560 Zea mays HOM05D003064 ORTHO05D001733 7.2e-25 117.9 155 47.7
Os06g0206900 Oryza sativa ssp. japonica HOM05D003064 ORTHO05D001733 1.6e-11 73.6 116 54.3
Glyma.15G267900 Glycine max HOM05D003064 ORTHO05D001733 2.7e-08 62.8 122 31.1
HPP92_004380 Vanilla planifolia HOM05D003064 ORTHO05D001733 2.7e-08 62.8 122 31.1
Glyma.08G158500 Glycine max HOM05D003064 ORTHO05D001733 4.7e-08 62.0 122 31.1
TPR.G16147 Trifolium pratense HOM05D003064 ORTHO05D001733 4.7e-08 62.0 122 31.1
Phvul.005G042500 Phaseolus vulgaris HOM05D003064 ORTHO05D001733 8.0e-08 61.2 122 30.3
Sed0014538 Sechium edule HOM05D003064 ORTHO05D001733 8.0e-08 61.2 122 30.3
TWI38G0681 Tripterygium wilfordii HOM05D003064 ORTHO05D001733 8.0e-08 61.2 122 30.3
ClCG09G003670 Citrullus lanatus HOM05D003064 ORTHO05D001733 1.0e-07 60.8 122 30.3
Medtr2g062220 Medicago truncatula HOM05D003064 ORTHO05D001733 1.0e-07 60.8 122 30.3
CsaV3_7G031520 Cucumis sativus L. HOM05D003064 ORTHO05D001733 1.4e-07 60.5 122 29.5
Atru.chr11.2712 Acer truncatum HOM05D003064 ORTHO05D001733 1.8e-07 60.1 131 29.0
Lalb_Chr25g0283731 Lupinus albus HOM05D003064 ORTHO05D001733 1.8e-07 60.1 122 29.5
ATR0598G068 Amborella trichopoda HOM05D003064 ORTHO05D001733 2.3e-07 59.7 123 31.7
Ca_03208_v3 Cicer arietinum L. HOM05D003064 ORTHO05D001733 2.3e-07 59.7 121 30.6
Lj3g0018900 Lotus japonicus HOM05D003064 ORTHO05D001733 3.0e-07 59.3 122 30.3
VMungo1080G1851 Vigna mungo HOM05D003064 ORTHO05D001733 3.0e-07 59.3 122 42.6
Cfa010704 Carpinus fangiana HOM05D003064 ORTHO05D001733 4.0e-07 58.9 137 30.7
Manes.10G152800 Manihot esculenta HOM05D003064 ORTHO05D001733 4.0e-07 58.9 122 30.3
Sed0005920 Sechium edule HOM05D003064 ORTHO05D001733 4.0e-07 58.9 122 29.5
Oeu060706.1 Olea europaea HOM05D003064 ORTHO05D001733 1.5e-06 57.0 122 29.5
Prupe.2G001900 Prunus persica HOM05D003064 ORTHO05D001733 1.5e-06 57.0 122 29.5
Zm00001eb314350 Zea mays HOM05D003064 ORTHO05D001733 2.0e-06 56.6 122 31.1
Haze_03274 Corylus avellana HOM05D003064 ORTHO05D001733 2.6e-06 56.2 120 30.8
Oeu032780.1 Olea europaea HOM05D003064 ORTHO05D001733 2.6e-06 56.2 121 28.9
Aqoxy1G00039 Aquilegia oxysepala HOM05D003064 ORTHO05D001733 3.3e-06 55.8 122 29.5
TAR633G1282 Trochodendron aralioides HOM05D003064 ORTHO05D001733 3.3e-06 55.8 122 30.3
Hma1.2p1_0128F.1_g059830 Hydrangea macrophylla HOM05D003064 ORTHO05D001733 4.4e-06 55.5 107 30.8
MD11G1012600 Malus domestica HOM05D003064 ORTHO05D001733 4.4e-06 55.5 36 61.1
Carub.0006s1824 Capsella rubella HOM05D003064 ORTHO05D001733 5.7e-06 55.1 121 28.1
CSS0002758 Camellia sinensis var. sinensis HOM05D003064 ORTHO05D001733 7.5e-06 54.7 122 27.9
Migut.B01404 Erythranthe guttata HOM05D003064 ORTHO05D001733 9.7e-06 54.3 123 26.8
QL01p010327 Quercus lobata HOM05D003064 ORTHO05D001733 9.7e-06 54.3 36 61.1


User provided reference genes

Program Settings