Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0671200 Oryza sativa ssp. japonica HOM05D012472 ORTHO05D013904 2.0e-198 695.7 371 100.0
Zm00001eb187050 Zea mays HOM05D012472 ORTHO05D013904 4.9e-157 558.1 362 77.9
Zm00001eb250220 Zea mays HOM05D012472 ORTHO05D013904 1.3e-146 523.5 359 74.4
Os02g0714801 Oryza sativa ssp. japonica HOM05D012472 ORTHO05D013904 1.6e-46 191.0 214 57.9
Zm00001eb171270 Zea mays HOM05D012472 ORTHO05D013904 8.2e-19 99.0 290 31.0
Zm00001eb376340 Zea mays HOM05D012472 ORTHO05D013904 1.1e-18 98.6 294 31.6
Zm00001eb376360 Zea mays HOM05D012472 ORTHO05D013904 1.4e-18 98.2 294 31.6
Zm00001eb376240 Zea mays HOM05D012472 ORTHO05D013904 1.8e-18 97.8 294 31.6
Zm00001eb376280 Zea mays HOM05D012472 ORTHO05D013904 2.4e-18 97.4 294 31.6
Zm00001eb376920 Zea mays HOM05D012472 ORTHO05D013904 1.2e-17 95.1 294 31.0
Zm00001eb376210 Zea mays HOM05D012472 ORTHO05D013904 3.4e-17 93.6 294 31.3
Zm00001eb376960 Zea mays HOM05D012472 ORTHO05D013904 5.9e-17 92.8 292 31.8
Zm00001eb376950 Zea mays HOM05D012472 ORTHO05D013904 7.7e-17 92.4 289 31.5
Os08g0193000 Oryza sativa ssp. japonica HOM05D012472 ORTHO05D013904 5.0e-16 89.7 314 29.9
Eucgr.F03527 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.0e-12 77.8 400 25.5
DCAR_023003 Daucus carota HOM05D000151 ORTHO05D000074 6.3e-11 72.8 413 24.0
Migut.C00911 Erythranthe guttata HOM05D000151 ORTHO05D000074 8.2e-11 72.4 400 24.5
Dinv12036 Davidia involucrata HOM05D000151 ORTHO05D000074 1.1e-10 72.0 394 24.1
MSTRG.25800 Avicennia marina HOM05D000151 ORTHO05D000074 1.8e-10 71.2 350 23.4
FAN20G1383 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.0e-10 69.3 408 25.2
Prupe.1G358000 Prunus persica HOM05D000151 ORTHO05D000074 7.0e-10 69.3 406 24.1
TAR636G1120 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.0e-10 69.3 394 23.4
Thecc.08G054100 Theobroma cacao HOM05D000151 ORTHO05D000074 9.1e-10 68.9 132 35.6
arahy.Tifrunner.gnm1.ann1.PYC0TU Arachis hypogaea HOM05D000151 ORTHO05D000074 1.2e-09 68.6 126 34.9
Aqoxy2G00256 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.7e-08 64.7 397 23.2
Oeu017909.1 Olea europaea HOM05D000151 ORTHO05D000074 2.2e-08 64.3 126 37.3
Dinv12023 Davidia involucrata HOM05D000151 ORTHO05D000074 6.5e-08 62.8 148 31.1
Glyma.04G019900 Glycine max HOM05D000151 ORTHO05D000074 8.5e-08 62.4 126 34.9
Aqoxy7G02698 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.9e-07 61.2 386 23.8
Rhsim06G0010000 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.9e-07 61.2 419 23.9
Aqoxy4G02957 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.5e-07 60.8 127 30.7
CARHR268510 Cardamine hirsuta HOM05D009259 ORTHO05D000074 3.2e-07 60.5 379 22.4
MD10G1231500 Malus domestica HOM05D000151 ORTHO05D000074 4.2e-07 60.1 134 29.1
Peaxi162Scf00119g00123 Petunia axillaris HOM05D000151 ORTHO05D000074 4.2e-07 60.1 126 34.9
Peaxi162Scf00119g00124 Petunia axillaris HOM05D000151 ORTHO05D000074 4.2e-07 60.1 126 34.9
TAR636G3671 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.4e-07 58.9 406 25.4
Cfa014059 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.2e-06 58.5 129 31.8
TAR636G0534 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-06 58.5 332 24.4
TAR636G2053 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-06 58.5 129 32.6
TAR636G2770 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.7e-06 57.4 387 21.2
Atru.chr1.153 Acer truncatum HOM05D003934 ORTHO05D005108 3.6e-06 57.0 321 22.7
Dinv12037 Davidia involucrata HOM05D000151 ORTHO05D000074 4.7e-06 56.6 380 21.6
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.7e-06 56.6 341 22.9
Dinv37646 Davidia involucrata HOM05D000151 ORTHO05D000074 8.0e-06 55.8 131 35.1
Migut.E01536 Erythranthe guttata HOM05D000151 ORTHO05D000074 8.0e-06 55.8 136 29.4
Sopen02g036600 Solanum pennellii HOM05D000151 ORTHO05D000074 8.0e-06 55.8 129 32.6
TAR626G1895 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.0e-06 55.8 125 35.2


User provided reference genes

Program Settings