Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 8.7e-93 343.6 169 100.0
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 6.7e-77 290.8 170 82.9
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 1.9e-55 219.5 173 68.2
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 6.7e-53 211.1 166 66.3
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 3.3e-52 208.8 159 64.8
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 1.6e-49 199.9 169 59.8
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 1.0e-48 197.2 164 61.0
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 1.3e-48 196.8 147 63.3
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 1.7e-48 196.4 164 60.4
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 3.8e-48 195.3 158 60.8
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 3.8e-48 195.3 167 58.7
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 8.5e-48 194.1 147 63.3
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 8.5e-48 194.1 171 56.7
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.9e-47 193.0 158 60.1
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 1.9e-47 193.0 164 60.4
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 4.2e-47 191.8 153 64.1
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 4.2e-47 191.8 168 58.3
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 5.5e-47 191.4 143 65.7
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 2.1e-46 189.5 163 57.7
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 2.1e-46 189.5 157 61.1
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 2.1e-46 189.5 146 62.3
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.7e-46 189.1 149 60.4
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 2.7e-46 189.1 175 56.6
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 3.6e-46 188.7 150 60.0
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 4.7e-46 188.3 155 56.8
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 6.1e-46 188.0 143 63.6
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 8.0e-46 187.6 145 60.7
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 1.0e-45 187.2 167 56.9
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 1.0e-45 187.2 151 56.3
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 3.0e-45 185.7 139 62.6
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 3.0e-45 185.7 157 59.9
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 3.0e-45 185.7 152 59.9
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 4.0e-45 185.3 143 62.9
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 5.2e-45 184.9 157 61.8
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 6.8e-45 184.5 141 63.1
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 8.8e-45 184.1 153 59.5
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 1.2e-44 183.7 149 57.7
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 1.2e-44 183.7 151 59.6
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 1.5e-44 183.3 157 59.2
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 1.5e-44 183.3 150 57.3
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 1.5e-44 183.3 163 57.1
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 2.0e-44 183.0 150 60.0
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 2.0e-44 183.0 149 57.7
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 2.0e-44 183.0 141 65.2
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 2.0e-44 183.0 153 58.8
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 2.6e-44 182.6 163 55.8
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 3.4e-44 182.2 155 54.8
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 3.4e-44 182.2 150 56.7
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 5.7e-44 181.4 172 54.7
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 7.5e-44 181.0 163 57.1
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 9.8e-44 180.6 150 59.3
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 1.7e-43 179.9 148 56.8
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 1.7e-43 179.9 155 57.4
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 1.7e-43 179.9 171 52.0
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 1.7e-43 179.9 144 62.5
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 2.2e-43 179.5 141 63.1
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 2.8e-43 179.1 180 52.8
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 6.3e-43 177.9 146 58.2
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 1.1e-42 177.2 165 55.2
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 1.1e-42 177.2 180 52.8
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.4e-42 176.8 180 52.8
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 2.4e-42 176.0 146 56.8
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 2.4e-42 176.0 148 54.1
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 4.1e-42 175.3 147 59.2
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 5.4e-42 174.9 145 61.4
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 2.7e-41 172.6 149 55.7
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 2.7e-41 172.6 148 59.5
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 3.5e-41 172.2 140 60.7
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 7.7e-41 171.0 142 57.7
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 1.0e-40 170.6 162 56.8
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 1.0e-40 170.6 146 57.5
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 1.3e-40 170.2 146 56.8
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 2.3e-40 169.5 146 56.8
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 2.3e-40 169.5 146 56.8
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 5.0e-40 168.3 146 56.2
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 5.0e-40 168.3 142 56.3
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 8.6e-40 167.5 180 47.8
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 1.9e-39 166.4 139 58.3
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 4.2e-39 165.2 172 51.2
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 1.2e-38 163.7 151 56.3
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 3.0e-37 159.1 207 43.5
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 3.4e-36 155.6 129 62.0
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 3.4e-36 155.6 154 51.3
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 9.8e-36 154.1 131 58.0
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 9.2e-34 147.5 167 48.5
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 2.0e-28 129.8 162 47.5
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 1.9e-26 123.2 109 55.0
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 4.1e-26 122.1 141 47.5
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 2.0e-25 119.8 127 51.2
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 4.3e-23 112.1 72 70.8
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 2.4e-18 96.3 61 68.9
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.0e-16 90.9 97 47.4
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 3.9e-16 89.0 104 44.2
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 2.5e-15 86.3 74 58.1
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 8.9e-13 77.8 65 60.0
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 7.1e-10 68.2 81 44.4
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 2.7e-09 66.2 82 42.7


User provided reference genes

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