Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0606100 Oryza sativa ssp. japonica HOM05D005198 ORTHO05D006839 4.6e-53 211.1 116 100.0
Zm00001eb246620 Zea mays HOM05D005198 ORTHO05D006839 1.9e-38 162.5 116 76.7
PSO675G4502 Papaver somniferum HOM05D005198 ORTHO05D006839 2.6e-24 115.5 109 60.6
PSO732G0749 Papaver somniferum HOM05D005198 ORTHO05D006839 2.6e-24 115.5 109 60.6
Hund03196 Selenicereus undatus HOM05D005198 ORTHO05D006839 2.7e-21 105.5 112 58.0
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 4.7e-21 104.8 116 56.0
TWI63G1273 Tripterygium wilfordii HOM05D005198 ORTHO05D006839 1.8e-20 102.8 110 56.4
Dinv33201 Davidia involucrata HOM05D005198 ORTHO05D006839 3.0e-20 102.1 114 60.5
FAN23G1744 Fragaria x ananassa HOM05D005198 ORTHO05D006839 2.0e-19 99.4 113 54.9
Rhsim04G0106800 Rhododendron simsii HOM05D005198 ORTHO05D006839 2.6e-19 99.0 112 56.2
Thecc.01G302200 Theobroma cacao HOM05D005198 ORTHO05D006839 3.4e-19 98.6 94 60.6
Aqoxy2G02750 Aquilegia oxysepala HOM05D005198 ORTHO05D006839 1.3e-18 96.7 110 55.5
RcHm_v2.0_Chr2g0123631 Rosa chinensis HOM05D005198 ORTHO05D006839 1.3e-18 96.7 113 55.8
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea HOM05D005198 ORTHO05D006839 1.7e-18 96.3 113 54.0
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea HOM05D005198 ORTHO05D006839 3.7e-18 95.1 113 54.9
TAR365G0102 Trochodendron aralioides HOM05D005198 ORTHO05D006839 4.8e-18 94.7 114 56.1
FAN28G0627 Fragaria x ananassa HOM05D005198 ORTHO05D006839 8.3e-18 94.0 113 55.8
Duzib151G0783 Durio zibethinus HOM05D005198 ORTHO05D006839 1.1e-17 93.6 111 57.7
PGR142G0872 Punica granatum HOM05D005198 ORTHO05D006839 1.4e-17 93.2 115 53.0
CiPaw.02G100600 Carya illinoinensis HOM05D005198 ORTHO05D006839 1.8e-17 92.8 113 54.0
FvH4_1g25500 Fragaria vesca HOM05D005198 ORTHO05D006839 4.1e-17 91.7 113 54.9
FAN19G2119 Fragaria x ananassa HOM05D005198 ORTHO05D006839 4.1e-17 91.7 113 54.9
Glyma.07G208200 Glycine max HOM05D005198 ORTHO05D006839 4.1e-17 91.7 113 50.4
CANSAT11G2028 Cannabis sativa HOM05D005198 ORTHO05D006839 1.2e-16 90.1 113 49.6
AT1G73180 Arabidopsis thaliana HOM05D005198 ORTHO05D006839 1.6e-16 89.7 93 55.9
CSS0015120 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 1.6e-16 89.7 110 52.7
CSS0046337 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 1.6e-16 89.7 110 52.7
FAN26G1320 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.6e-16 89.7 112 54.5
Lj1g0021010 Lotus japonicus HOM05D005198 ORTHO05D006839 1.6e-16 89.7 113 51.3
MD15G1424000 Malus domestica HOM05D005198 ORTHO05D006839 1.6e-16 89.7 110 50.9
AUR62023798 Chenopodium quinoa HOM05D005198 ORTHO05D006839 2.0e-16 89.4 112 51.8
Nn1g09646 Nelumbo nucifera HOM05D005198 ORTHO05D006839 2.0e-16 89.4 93 54.8
SGA_v2.0_scaffold12G06184 Striga asiatica HOM05D005198 ORTHO05D006839 2.0e-16 89.4 115 50.4
AL2G32950 Arabidopsis lyrata HOM05D005198 ORTHO05D006839 2.7e-16 89.0 112 51.8
Ciclev10019752m.g Citrus clementina HOM05D005198 ORTHO05D006839 2.7e-16 89.0 95 52.6
Ah.13g073540 Amaranthus hybridus HOM05D005198 ORTHO05D006839 5.9e-16 87.8 113 51.3
Manes.04G036150 Manihot esculenta HOM05D005198 ORTHO05D006839 5.9e-16 87.8 93 54.8
Haze_01365 Corylus avellana HOM05D005198 ORTHO05D006839 1.0e-15 87.0 110 51.8
Cc03_g14040 Coffea canephora HOM05D005198 ORTHO05D006839 1.7e-15 86.3 113 51.3
CARHR066180 Cardamine hirsuta HOM05D005198 ORTHO05D006839 3.8e-15 85.1 93 53.8
CDE04G2667 Ceratophyllum demersum HOM05D005198 ORTHO05D006839 6.5e-15 84.3 110 49.1
Sed0009334 Sechium edule HOM05D005198 ORTHO05D006839 6.5e-15 84.3 115 49.6
Solyc08g014060.4 Solanum lycopersicum HOM05D005198 ORTHO05D006839 6.5e-15 84.3 120 49.2
GSVIVG01038139001 Vitis vinifera HOM05D005198 ORTHO05D006839 1.1e-14 83.6 91 53.8
AUR62002390 Chenopodium quinoa HOM05D005198 ORTHO05D006839 2.5e-14 82.4 92 52.2
QL10p055731 Quercus lobata HOM05D005198 ORTHO05D006839 2.5e-14 82.4 78 56.4
Actinidia28982 Actinidia chinensis HOM05D005198 ORTHO05D006839 3.2e-14 82.0 113 50.4
ClCG07G015220 Citrullus lanatus HOM05D005198 ORTHO05D006839 3.2e-14 82.0 116 48.3
Lj3g0007177 Lotus japonicus HOM05D005198 ORTHO05D006839 3.2e-14 82.0 113 49.6
Lj6g0012253 Lotus japonicus HOM05D005198 ORTHO05D006839 3.2e-14 82.0 113 49.6
Prupe.1G207000 Prunus persica HOM05D005198 ORTHO05D006839 3.2e-14 82.0 113 50.4
Gohir.A02G009975 Gossypium hirsutum HOM05D005198 ORTHO05D006839 4.2e-14 81.6 93 53.8
Sp5g28150 Schrenkiella parvula HOM05D005198 ORTHO05D006839 4.2e-14 81.6 93 48.4
Sabra13G0105600 Salix brachista HOM05D005198 ORTHO05D006839 5.5e-14 81.3 92 53.3
unitig_92.g28214 Utricularia gibba HOM05D005198 ORTHO05D006839 7.2e-14 80.9 94 52.1
Carub.0002s1997 Capsella rubella HOM05D005198 ORTHO05D006839 9.4e-14 80.5 111 45.9
Thhalv10018413m.g Eutrema salsugineum HOM05D005198 ORTHO05D006839 3.6e-13 78.6 93 49.5
HanXRQChr15g0483441 Helianthus annuus HOM05D005198 ORTHO05D006839 4.7e-13 78.2 115 46.1
BcaC08g45664 Brassica carinata HOM05D005198 ORTHO05D006839 6.1e-13 77.8 93 47.3
C06p34190 Brassica napus HOM05D005198 ORTHO05D006839 6.1e-13 77.8 93 47.3
MELO3C017760.2 Cucumis melo HOM05D005198 ORTHO05D006839 6.1e-13 77.8 116 48.3
CsaV3_4G002810 Cucumis sativus L. HOM05D005198 ORTHO05D006839 6.1e-13 77.8 116 48.3
SHI30329 Sapria himalayana HOM05D005198 ORTHO05D000023 1.0e-12 77.0 112 41.1
Gorai.005G012500 Gossypium raimondii HOM05D005198 ORTHO05D006839 1.4e-12 76.6 93 52.7
BraA07t30630Z Brassica rapa HOM05D005198 ORTHO05D006839 1.8e-12 76.3 93 46.2
Gohir.D02G010200 Gossypium hirsutum HOM05D005198 ORTHO05D006839 1.8e-12 76.3 93 52.7
Oeu020813.1 Olea europaea HOM05D005198 ORTHO05D006839 1.8e-12 76.3 73 61.6
Aa31LG4G3470 Aethionema arabicum HOM05D005198 ORTHO05D006839 2.3e-12 75.9 108 47.2
Medtr4g087280 Medicago truncatula HOM05D005198 ORTHO05D006839 2.3e-12 75.9 107 50.5
Psat7g121400 Pisum sativum HOM05D005198 ORTHO05D006839 2.3e-12 75.9 107 50.5
SalBow3G0226 Salvia bowleyana HOM05D005198 ORTHO05D006839 3.0e-12 75.5 76 55.3
Sopen08g004940 Solanum pennellii HOM05D005198 ORTHO05D006839 3.0e-12 75.5 124 44.4
Eucgr.L01724 Eucalyptus grandis HOM05D005198 ORTHO05D006839 6.8e-12 74.3 115 45.2
Potri.013G126300 Populus trichocarpa HOM05D005198 ORTHO05D006839 8.8e-12 73.9 113 45.1
A07p29920 Brassica napus HOM05D005198 ORTHO05D006839 1.2e-11 73.6 93 44.1
TPR.G23517 Trifolium pratense HOM05D005198 ORTHO05D006839 1.2e-11 73.6 77 53.2
Lalb_Chr09g0328121 Lupinus albus HOM05D005198 ORTHO05D006839 3.4e-11 72.0 78 51.3
VMungo0251G3269 Vigna mungo HOM05D005198 ORTHO05D006839 3.4e-11 72.0 113 46.9
ECA232G1195 Erigeron canadensis HOM05D005198 ORTHO05D006839 4.4e-11 71.6 115 46.1
MBI11_g23941_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 5.7e-11 71.2 74 54.1
Ca_18641_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 7.5e-11 70.9 78 52.6
Eucgr.H00311 Eucalyptus grandis HOM05D005198 ORTHO05D006839 7.5e-11 70.9 115 44.3
Dinv07059 Davidia involucrata HOM05D005198 ORTHO05D006839 9.8e-11 70.5 76 52.6
THA.LOC104813938 Tarenaya hassleriana HOM05D005198 ORTHO05D006839 9.8e-11 70.5 108 45.4
Glyma.02G137200 Glycine max HOM05D005198 ORTHO05D006839 1.7e-10 69.7 91 48.4
Lsat_1_v5_gn_9_61481 Lactuca sativa HOM05D005198 ORTHO05D006839 1.7e-10 69.7 110 45.5
Nitab4.5_0011921g0010 Nicotiana tabacum HOM05D005198 ORTHO05D006839 1.7e-10 69.7 79 53.2
vmacro09048 Vaccinium macrocarpon HOM05D005198 ORTHO05D006839 1.7e-10 69.7 131 41.2
Phvul.003G296400 Phaseolus vulgaris HOM05D005198 ORTHO05D006839 2.8e-10 68.9 93 47.3
Hma1.2p1_0554F.1_g177930 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 3.7e-10 68.6 79 46.8
Lalb_Chr16g0384471 Lupinus albus HOM05D005198 ORTHO05D006839 4.8e-10 68.2 78 50.0
Migut.G01222 Erythranthe guttata HOM05D005198 ORTHO05D006839 8.3e-10 67.4 73 56.2
BolC6t38540H Brassica oleracea HOM05D005198 ORTHO05D006839 3.1e-09 65.5 93 41.9
DCAR_027526 Daucus carota HOM05D005198 ORTHO05D006839 3.1e-09 65.5 112 42.9
CAN.G1411.3 Capsicum annuum HOM05D005198 ORTHO05D006839 9.1e-09 63.9 113 45.1
Atru.BG.83.p Acer truncatum HOM05D005198 ORTHO05D006839 1.6e-08 63.2 68 50.0
ATR0733G245 Amborella trichopoda HOM05D005198 ORTHO05D006839 1.6e-08 63.2 79 46.8
Eucgr.H00310 Eucalyptus grandis HOM05D005198 ORTHO05D006839 2.7e-08 62.4 72 51.4
Peaxi162Scf00075g01544 Petunia axillaris HOM05D005198 ORTHO05D006839 1.3e-07 60.1 82 45.1
Cpa.g.sc9.361 Carica papaya HOM05D005198 ORTHO05D006839 2.3e-07 59.3 71 54.9
Nitab4.5_0000122g0140 Nicotiana tabacum HOM05D005198 ORTHO05D006839 5.5e-06 54.7 77 39.0
COL.COLO4_23329 Corchorus olitorius HOM05D005198 ORTHO05D006839 7.2e-06 54.3 71 46.5


User provided reference genes

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