Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0469000 Oryza sativa ssp. japonica HOM05D000120 ORTHO05D009410 1.2e-135 486.5 252 100.0
Zm00001eb180650 Zea mays HOM05D000120 ORTHO05D009410 2.2e-68 263.1 258 59.3
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 1.2e-16 91.3 246 32.5
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 1.1e-14 84.7 238 32.4
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 1.4e-14 84.3 239 28.5
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 3.2e-14 83.2 238 29.0
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 4.1e-14 82.8 238 30.7
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 7.1e-14 82.0 238 30.7
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 3.5e-13 79.7 238 30.3
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 6.0e-13 79.0 231 30.7
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 7.8e-13 78.6 234 31.6
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 3.0e-12 76.6 240 28.8
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 6.6e-12 75.5 244 30.7
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 2.5e-11 73.6 233 29.6
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 2.5e-11 73.6 261 28.4
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 4.3e-11 72.8 238 28.6
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 7.3e-11 72.0 233 30.0
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 9.5e-11 71.6 237 28.7
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 9.5e-11 71.6 240 28.8
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 2.1e-10 70.5 213 28.2
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 2.1e-10 70.5 236 30.5
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 2.8e-10 70.1 235 29.4
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 8.1e-10 68.6 220 29.1
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 8.1e-10 68.6 249 27.3
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 1.8e-09 67.4 218 29.4
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 1.8e-09 67.4 254 29.5
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 2.3e-09 67.0 242 28.9
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 2.3e-09 67.0 244 29.1
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 2.3e-09 67.0 230 28.3
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 3.1e-09 66.6 239 28.5
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 4.0e-09 66.2 221 29.0
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 4.0e-09 66.2 231 31.6
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 6.8e-09 65.5 232 29.7
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 8.9e-09 65.1 249 26.9
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 8.9e-09 65.1 204 27.5
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 8.9e-09 65.1 216 27.8
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 1.5e-08 64.3 246 28.0
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 2.6e-08 63.5 242 28.9
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 9.9e-08 61.6 238 27.3
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 1.3e-07 61.2 231 29.9
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 1.3e-07 61.2 218 26.1
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 1.3e-07 61.2 214 28.5
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 1.7e-07 60.8 240 24.2
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 2.2e-07 60.5 218 28.4
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 2.9e-07 60.1 267 25.5
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 3.7e-07 59.7 235 28.1
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 4.9e-07 59.3 213 28.6
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 6.4e-07 58.9 243 28.0
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 8.3e-07 58.5 221 27.1
Sp7g36860 Schrenkiella parvula HOM05D011065 ORTHO05D009410 1.1e-06 58.2 275 24.4
Aa31LG6G16270 Aethionema arabicum HOM05D011065 ORTHO05D009410 1.4e-06 57.8 236 25.8
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 1.9e-06 57.4 221 25.3
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 1.9e-06 57.4 235 26.4
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 1.9e-06 57.4 238 26.9
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 2.4e-06 57.0 233 26.6
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 4.1e-06 56.2 214 28.5
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 5.4e-06 55.8 254 26.4
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 7.1e-06 55.5 217 26.3
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 7.1e-06 55.5 244 26.6


User provided reference genes

Program Settings