Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0288925 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D036983 5.5e-253 877.1 425 100.0
Zm00001eb236980 Zea mays HOM05D017235 ORTHO05D036983 2.4e-59 233.8 408 37.3
Os02g0294100 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D036983 2.0e-53 214.2 438 37.7
Os02g0288000 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D010635 6.2e-47 192.6 423 37.4
Os02g0287900 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D010635 1.6e-42 177.9 402 35.8
Zm00001eb240310 Zea mays HOM05D017235 ORTHO05D442372 1.7e-28 131.3 438 28.3
Os04g0313500 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D299362 1.9e-27 127.9 463 29.6
Os02g0287800 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D010635 7.2e-19 99.4 104 52.9
Os10g0188000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 4.5e-13 80.1 150 40.0
Zm00001eb285670 Zea mays HOM05D008694 ORTHO05D010635 5.9e-13 79.7 369 28.5
Zm00001eb161470 Zea mays HOM05D028964 ORTHO05D049742 1.3e-12 78.6 142 41.5
Zm00001eb323630 Zea mays HOM05D010111 ORTHO05D442090 1.1e-11 75.5 317 29.0
Os02g0249700 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.5e-11 75.1 139 41.7
Os10g0136200 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 2.5e-11 74.3 114 43.0
Os11g0166100 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 3.2e-11 73.9 402 26.9
Zm00001eb298860 Zea mays HOM05D008694 ORTHO05D010635 5.5e-11 73.2 416 26.2
Os01g0509900 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D010635 3.6e-10 70.5 113 45.1
Os05g0147700 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D010635 1.0e-09 68.9 176 33.5
Os10g0142500 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 4.0e-09 67.0 127 41.7
Os10g0137000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 8.8e-09 65.9 132 38.6
Os05g0320100 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.2e-08 65.5 131 38.9
Os10g0138000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.2e-08 65.5 125 36.0
Zm00001eb346560 Zea mays HOM05D008694 ORTHO05D010635 1.2e-08 65.5 142 37.3
Os10g0137700 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.5e-08 65.1 95 47.4
Zm00001eb323800 Zea mays HOM05D010111 ORTHO05D049854 1.5e-08 65.1 131 39.7
Os07g0554500 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D293036 2.6e-08 64.3 91 44.0
Os07g0554900 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D010635 2.6e-08 64.3 295 28.5
Os10g0145200 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 2.6e-08 64.3 75 49.3
Os09g0323400 Oryza sativa ssp. japonica HOM05D015368 ORTHO05D296723 1.7e-07 61.6 74 48.6
Os07g0421000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 2.2e-07 61.2 432 23.4
Os07g0122900 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 3.7e-07 60.5 407 26.5
Os07g0120200 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 4.8e-07 60.1 86 44.2
Os10g0145000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 4.8e-07 60.1 333 26.4
Zm00001eb332480 Zea mays HOM05D008694 ORTHO05D010635 6.3e-07 59.7 417 24.0
Os07g0554200 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D293391 1.1e-06 58.9 104 39.4
Os07g0517700 Oryza sativa ssp. japonica HOM05D028964 ORTHO05D049742 1.4e-06 58.5 92 44.6
Os05g0147800 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D301072 1.8e-06 58.2 139 40.3
Zm00001eb042100 Zea mays HOM05D028964 ORTHO05D010635 1.8e-06 58.2 120 38.3
Os01g0557400 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 5.3e-06 56.6 408 25.0


User provided reference genes

Program Settings