Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0288000 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D010635 1.3e-238 829.3 413 100.0
Os02g0287900 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D010635 5.2e-115 418.7 432 55.8
Os02g0294100 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D036983 5.3e-75 285.8 433 42.3
Os02g0288925 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D036983 7.4e-45 185.7 423 37.4
Zm00001eb236980 Zea mays HOM05D017235 ORTHO05D036983 1.9e-40 171.0 408 33.1
Os04g0313500 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D299362 6.5e-33 146.0 456 31.6
Zm00001eb240310 Zea mays HOM05D017235 ORTHO05D442372 1.2e-31 141.7 416 31.5
Os02g0287800 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D010635 3.5e-18 97.1 104 58.7
Os02g0249700 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.7e-12 78.2 406 27.6
Os07g0120200 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 6.3e-12 76.3 405 26.2
Zm00001eb285670 Zea mays HOM05D008694 ORTHO05D010635 1.1e-11 75.5 365 29.0
Zm00001eb346560 Zea mays HOM05D008694 ORTHO05D010635 2.4e-11 74.3 318 29.9
Os10g0145200 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 9.2e-11 72.4 382 30.1
Os10g0188000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 9.2e-11 72.4 135 41.5
Os10g0136200 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 4.5e-10 70.1 113 48.7
Os10g0138000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.3e-09 68.6 123 43.9
Os11g0166100 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.3e-09 68.6 397 27.5
Zm00001eb161470 Zea mays HOM05D028964 ORTHO05D049742 1.3e-09 68.6 418 26.3
Os10g0137700 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.7e-09 68.2 85 54.1
Os05g0320100 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 2.3e-09 67.8 114 47.4
Os05g0147700 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D010635 6.6e-09 66.2 116 44.8
Os01g0509900 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D010635 8.6e-09 65.9 134 40.3
Os10g0137000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 8.6e-09 65.9 115 45.2
Os07g0123000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 3.3e-08 63.9 406 26.8
Os10g0142500 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 4.3e-08 63.5 61 57.4
Os05g0147800 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D301072 2.8e-07 60.8 160 37.5
Os07g0122900 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 2.8e-07 60.8 396 27.0
Zm00001eb323800 Zea mays HOM05D010111 ORTHO05D049854 2.8e-07 60.8 140 34.3
Zm00001eb323630 Zea mays HOM05D010111 ORTHO05D442090 3.6e-07 60.5 107 40.2
Zm00001eb042100 Zea mays HOM05D028964 ORTHO05D010635 4.7e-07 60.1 328 27.1
Os01g0557400 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.4e-06 58.5 381 27.8
Os07g0120400 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.4e-06 58.5 130 39.2
Zm00001eb028860 Zea mays HOM05D008694 ORTHO05D010635 3.0e-06 57.4 398 25.9
Os07g0421000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 4.0e-06 57.0 404 25.2
Os07g0554500 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D293036 4.0e-06 57.0 82 47.6
Os10g0145000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 5.2e-06 56.6 321 27.7
Os07g0517700 Oryza sativa ssp. japonica HOM05D028964 ORTHO05D049742 6.8e-06 56.2 113 39.8


User provided reference genes

Program Settings