Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0267350 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 6.8e-108 394.0 203 100.0
Os01g0823150 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 9.0e-44 181.0 189 61.4
Zm00001eb047330 Zea mays HOM05D009743 ORTHO05D012107 1.1e-41 174.1 194 58.8
Os10g0439166 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 1.9e-41 173.3 193 58.0
Os03g0155566 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 1.5e-38 163.7 192 57.3
Os05g0477666 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 6.2e-37 158.3 192 58.3
Zm00001eb261020 Zea mays HOM05D009743 ORTHO05D012107 5.8e-35 151.8 164 57.3
Zm00001eb261040 Zea mays HOM05D009743 ORTHO05D012107 5.8e-35 151.8 164 57.3
Os03g0822033 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 7.1e-33 144.8 189 55.0
Os02g0268675 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 2.5e-30 136.3 106 71.7
Os05g0277100 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 4.8e-29 132.1 189 51.9
Os03g0377201 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 9.0e-28 127.9 197 47.7
Zm00001eb047370 Zea mays HOM05D009743 ORTHO05D012107 6.1e-24 115.2 159 51.6
Os01g0249050 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 5.1e-23 112.1 185 47.6
Zm00001eb004280 Zea mays HOM05D009743 ORTHO05D012107 4.3e-22 109.0 104 55.8
Zm00001eb261120 Zea mays HOM05D009743 ORTHO05D012107 1.4e-20 104.0 105 64.8
Os05g0276750 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 7.4e-14 81.6 113 44.2
SGA_v2.0_scaffold196G40907 Striga asiatica HOM05D009743 ORTHO05D012107 1.5e-11 73.9 162 38.9
unitig_747.g21396 Utricularia gibba HOM05D009743 ORTHO05D012107 3.4e-11 72.8 95 48.4
Os06g0621950 Oryza sativa ssp. japonica HOM05D009743 ORTHO05D012107 1.0e-10 71.2 194 37.6
SGA_v2.0_scaffold110G31327 Striga asiatica HOM05D009743 ORTHO05D012107 2.2e-10 70.1 170 41.8
SGA_v2.0_scaffold126G33782 Striga asiatica HOM05D022532 ORTHO05D023449 5.1e-07 58.9 100 40.0


User provided reference genes

Program Settings