Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0249700 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 3.2e-264 914.4 440 100.0
Os10g0136200 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 9.3e-70 268.5 379 44.3
Zm00001eb346560 Zea mays HOM05D008694 ORTHO05D010635 6.2e-66 255.8 390 42.8
Os10g0137700 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 4.9e-63 246.1 396 41.4
Os05g0320100 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.9e-62 244.2 382 41.4
Os10g0137000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 5.6e-59 232.6 380 38.7
Zm00001eb285670 Zea mays HOM05D008694 ORTHO05D010635 1.9e-54 217.6 411 39.4
Os10g0142500 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.0e-52 211.8 396 38.6
Os10g0145200 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 4.5e-48 196.4 375 36.8
Os11g0166100 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 4.5e-48 196.4 380 37.4
Os10g0145100 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 3.0e-44 183.7 386 35.0
Os10g0145000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 6.3e-42 176.0 384 35.4
Os10g0155300 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 3.2e-38 163.7 376 33.0
Os10g0188000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 8.2e-34 149.1 225 40.4
Os07g0120400 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.4e-33 148.3 392 32.7
Os07g0120200 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.5e-32 144.8 381 31.8
Os10g0139300 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 4.5e-32 143.3 402 31.3
Os07g0122900 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 6.5e-31 139.4 383 32.9
Os01g0557400 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 3.2e-30 137.1 391 31.5
Zm00001eb043870 Zea mays HOM05D008694 ORTHO05D010635 7.2e-30 136.0 404 28.5
Os10g0123200 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 8.8e-28 129.0 145 55.2
Zm00001eb043880 Zea mays HOM05D008694 ORTHO05D010635 3.3e-27 127.1 390 27.9
Os07g0421000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.3e-26 125.2 394 30.7
Zm00001eb298860 Zea mays HOM05D008694 ORTHO05D010635 1.1e-25 122.1 386 30.8
Os10g0138000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 3.1e-25 120.6 163 49.1
Os07g0123000 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 5.3e-25 119.8 397 31.5
Zm00001eb332480 Zea mays HOM05D008694 ORTHO05D010635 9.1e-25 119.0 395 30.9
Os10g0136900 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 2.2e-23 114.4 192 32.8
Os10g0138300 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.2e-21 108.6 434 25.3
Os10g0136150 Oryza sativa ssp. japonica HOM05D008243 ORTHO05D017094 2.1e-21 107.8 207 32.4
Zm00001eb028860 Zea mays HOM05D008694 ORTHO05D010635 6.3e-18 96.3 385 29.4
Os10g0144800 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 2.4e-17 94.4 380 28.2
Os10g0141600 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 2.7e-16 90.9 235 29.4
Os02g0288000 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D010635 3.5e-16 90.5 406 27.6
Zm00001eb302490 Zea mays HOM05D008694 ORTHO05D010635 4.5e-16 90.1 396 27.0
Zm00001eb299080 Zea mays HOM05D062505 ORTHO05D010635 1.1e-14 85.5 387 31.8
Os10g0138600 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 1.2e-13 82.0 328 28.4
Os01g0509900 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D010635 1.6e-13 81.6 333 29.7
Os08g0299700 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 2.7e-13 80.9 188 38.8
Zm00001eb323830 Zea mays HOM05D010111 ORTHO05D010635 8.0e-13 79.3 277 31.8
Os02g0288925 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D036983 1.4e-12 78.6 139 41.7
Zm00001eb299160 Zea mays HOM05D008694 ORTHO05D010635 9.8e-11 72.4 150 40.0
Zm00001eb323800 Zea mays HOM05D010111 ORTHO05D049854 3.7e-10 70.5 329 25.8
Dinv23189 Davidia involucrata HOM05D000571 ORTHO05D000435 4.8e-10 70.1 368 26.1
Os09g0324300 Oryza sativa ssp. japonica HOM05D015368 ORTHO05D023030 8.3e-10 69.3 364 28.8
Zm00001eb299040 Zea mays HOM05D062505 ORTHO05D010635 8.3e-10 69.3 398 28.6
Os02g0294100 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D036983 3.1e-09 67.4 407 27.8
Os10g0139600 Oryza sativa ssp. japonica HOM05D008694 ORTHO05D010635 9.1e-09 65.9 40 72.5
Zm00001eb055960 Zea mays HOM05D044120 ORTHO05D050030 1.2e-08 65.5 257 30.7
Os09g0324400 Oryza sativa ssp. japonica HOM05D015368 ORTHO05D023030 2.0e-08 64.7 399 26.6
Zm00001eb042100 Zea mays HOM05D028964 ORTHO05D010635 2.0e-08 64.7 322 28.6
Os09g0341500 Oryza sativa ssp. japonica HOM05D015368 ORTHO05D023030 2.2e-07 61.2 419 27.2
FAN16G2717 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.1e-06 58.9 262 26.0
RcHm_v2.0_Chr2g0167131 Rosa chinensis HOM05D000007 ORTHO05D000017 1.1e-06 58.9 390 23.3
SGA_v2.0_scaffold100G29614 Striga asiatica HOM05D012911 ORTHO05D010595 1.5e-06 58.5 185 25.4
FvH4_3g03940 Fragaria vesca HOM05D000007 ORTHO05D000017 1.9e-06 58.2 264 25.0
Os02g0287800 Oryza sativa ssp. japonica HOM05D017235 ORTHO05D010635 2.5e-06 57.8 62 58.1
Os03g0727800 Oryza sativa ssp. japonica HOM05D044120 ORTHO05D050030 2.5e-06 57.8 246 28.5
Os07g0554500 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D293036 9.4e-06 55.8 92 48.9


User provided reference genes

Program Settings