Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0241300 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 4.8e-192 674.5 374 100.0
Zm00001eb384030 Zea mays HOM05D009009 ORTHO05D016371 3.3e-52 209.9 316 39.9
Zm00001eb308100 Zea mays HOM05D009009 ORTHO05D010828 2.4e-50 203.8 333 39.0
Zm00001eb176540 Zea mays HOM05D009009 ORTHO05D010828 1.7e-48 197.6 352 36.6
Zm00001eb276390 Zea mays HOM05D009009 ORTHO05D010828 8.5e-48 195.3 352 36.4
Zm00001eb019990 Zea mays HOM05D009009 ORTHO05D010828 7.2e-47 192.2 341 36.1
Zm00001eb417100 Zea mays HOM05D009009 ORTHO05D010828 8.8e-45 185.3 148 54.7
Zm00001eb278490 Zea mays HOM05D009009 ORTHO05D010828 2.4e-42 177.2 150 53.3
Os02g0583500 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 3.6e-30 136.7 154 40.3
Os11g0519100 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 3.6e-30 136.7 154 40.3
Os04g0519100 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 6.1e-30 136.0 154 40.3
Os06g0240600 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 3.1e-26 123.6 135 42.2
Os04g0228600 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 7.0e-26 122.5 143 38.5
Os06g0271400 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 5.9e-25 119.4 152 35.5
Zm00001eb084650 Zea mays HOM05D009296 ORTHO05D010828 1.9e-23 114.4 154 39.6
Zm00001eb029830 Zea mays HOM05D009296 ORTHO05D010828 2.5e-23 114.0 154 39.6
Zm00001eb176390 Zea mays HOM05D009296 ORTHO05D010828 9.4e-23 112.1 154 39.0
Zm00001eb006240 Zea mays HOM05D009296 ORTHO05D010828 1.6e-22 111.3 152 38.8
Zm00001eb354130 Zea mays HOM05D009296 ORTHO05D010828 8.0e-22 109.0 154 39.6
Zm00001eb423000 Zea mays HOM05D009296 ORTHO05D010828 8.0e-22 109.0 156 38.5
Zm00001eb341730 Zea mays HOM05D009009 ORTHO05D010828 1.0e-21 108.6 283 30.7
Zm00001eb385530 Zea mays HOM05D009296 ORTHO05D010828 3.0e-21 107.1 140 38.6
Zm00001eb308370 Zea mays HOM05D009009 ORTHO05D016371 5.4e-18 96.3 88 50.0
PGSC0003DMG400001138 Solanum tuberosum HOM05D008892 ORTHO05D010661 5.9e-17 92.8 148 33.8
Zm00001eb266790 Zea mays HOM05D009009 ORTHO05D010828 6.6e-16 89.4 55 69.1
Dinv13764 Davidia involucrata HOM05D011313 ORTHO05D013316 6.1e-14 82.8 150 29.3
COL.COLO4_19832 Corchorus olitorius HOM05D015286 ORTHO05D000669 3.4e-12 77.0 150 29.3
SGA_v2.0_scaffold752G53551 Striga asiatica HOM05D025956 ORTHO05D000669 5.4e-10 69.7 149 26.2
Os11g0451051 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 8.6e-08 62.4 60 46.7
COL.COLO4_29630 Corchorus olitorius HOM05D015286 ORTHO05D010661 3.3e-07 60.5 96 35.4
Zm00001eb132800 Zea mays HOM05D009296 ORTHO05D010828 7.3e-07 59.3 81 40.7
COL.COLO4_16289 Corchorus olitorius HOM05D059948 ORTHO05D010661 4.7e-06 56.6 132 26.5


User provided reference genes

Program Settings