Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 7.6e-173 610.5 338 100.0
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 1.2e-133 480.3 340 73.8
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 4.2e-70 269.2 340 47.4
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 1.1e-65 254.6 346 45.7
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 4.9e-63 245.7 342 45.3
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 8.4e-63 245.0 340 43.5
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 1.1e-62 244.6 339 45.4
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 3.2e-62 243.0 339 44.5
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 9.3e-62 241.5 341 45.2
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 9.3e-62 241.5 341 41.6
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 9.3e-62 241.5 339 42.5
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 1.3e-60 237.7 339 41.0
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.8e-60 237.3 339 42.2
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 1.8e-60 237.3 339 42.8
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 1.9e-59 233.8 340 43.5
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 3.3e-59 233.0 340 41.5
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 4.3e-59 232.6 338 42.9
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 7.4e-59 231.9 342 42.7
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 9.7e-59 231.5 341 42.5
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 9.7e-59 231.5 338 43.2
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 1.3e-58 231.1 339 42.2
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 1.6e-58 230.7 341 41.9
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 3.7e-58 229.6 339 42.8
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 4.8e-58 229.2 340 43.2
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 6.3e-58 228.8 339 41.3
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 8.2e-58 228.4 340 41.5
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 8.2e-58 228.4 338 42.0
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 1.1e-57 228.0 339 41.0
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 1.8e-57 227.3 340 43.2
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 1.8e-57 227.3 339 41.9
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 1.8e-57 227.3 339 41.3
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 3.1e-57 226.5 340 41.5
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 4.1e-57 226.1 341 41.9
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 4.1e-57 226.1 341 43.1
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 5.3e-57 225.7 339 42.2
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 5.3e-57 225.7 339 42.5
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 1.2e-56 224.6 339 41.3
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 1.2e-56 224.6 340 42.1
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 1.5e-56 224.2 339 40.4
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 2.0e-56 223.8 341 41.3
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 2.0e-56 223.8 338 41.4
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 2.6e-56 223.4 341 41.9
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 5.9e-56 222.2 343 41.1
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 7.6e-56 221.9 339 41.6
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 1.3e-55 221.1 340 42.4
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 1.7e-55 220.7 339 40.7
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 1.7e-55 220.7 340 42.6
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 2.2e-55 220.3 372 39.2
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 2.9e-55 219.9 339 41.9
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 5.0e-55 219.2 338 40.8
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 8.5e-55 218.4 340 42.6
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 1.1e-54 218.0 339 41.3
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 3.2e-54 216.5 342 40.9
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 3.2e-54 216.5 341 41.3
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 7.2e-54 215.3 339 40.4
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 9.3e-54 214.9 339 40.7
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 9.3e-54 214.9 339 40.7
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 2.7e-53 213.4 344 41.9
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 3.6e-53 213.0 350 39.7
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 4.6e-53 212.6 340 40.3
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 6.1e-53 212.2 340 40.6
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 1.8e-52 210.7 339 40.4
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 1.8e-52 210.7 274 43.8
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 3.9e-52 209.5 341 41.9
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 6.7e-52 208.8 343 41.1
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.1e-51 208.0 339 40.1
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 1.1e-51 208.0 313 43.8
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 1.1e-51 208.0 340 39.7
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 2.5e-51 206.8 340 40.6
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 4.3e-51 206.1 342 39.8
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 4.3e-51 206.1 344 37.8
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 1.7e-50 204.1 339 39.8
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 1.7e-50 204.1 339 38.3
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 2.2e-50 203.8 343 39.7
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 2.2e-50 203.8 339 39.5
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 4.8e-50 202.6 342 40.1
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 3.1e-49 199.9 345 36.2
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 4.1e-49 199.5 340 39.4
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 5.3e-49 199.1 341 38.7
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 9.1e-49 198.4 339 39.2
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 2.0e-48 197.2 341 39.0
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 3.4e-48 196.4 348 39.9
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 4.5e-48 196.1 340 39.4
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 5.9e-48 195.7 342 38.3
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 5.9e-48 195.7 281 44.8
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 1.0e-47 194.9 345 38.8
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 2.2e-47 193.7 341 39.6
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 2.9e-47 193.4 237 46.0
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.9e-47 193.4 414 36.2
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 3.8e-47 193.0 342 36.5
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 5.0e-47 192.6 341 39.9
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 1.1e-46 191.4 338 38.5
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 1.4e-46 191.0 341 37.8
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 5.5e-46 189.1 233 46.4
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 9.4e-46 188.3 278 39.6
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 1.2e-45 188.0 321 39.6
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 1.6e-45 187.6 363 36.6
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 2.1e-45 187.2 343 39.4
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 3.6e-45 186.4 348 35.3
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 5.1e-44 182.6 278 39.6
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 2.6e-43 180.3 229 45.9
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 1.7e-42 177.6 338 36.4
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 3.7e-42 176.4 340 37.6
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 3.1e-41 173.3 308 37.0
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.5e-40 171.0 235 41.3
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.6e-40 170.2 310 39.0
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 2.2e-39 167.2 236 40.7
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 3.8e-39 166.4 346 35.0
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 3.6e-37 159.8 230 42.6
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 1.4e-36 157.9 338 34.6
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 2.3e-36 157.1 234 42.3
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 5.2e-36 156.0 167 49.7
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 2.0e-35 154.1 339 36.6
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 2.0e-35 154.1 282 38.3
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 4.4e-35 152.9 342 36.3
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 8.5e-31 138.7 253 38.3
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 1.9e-30 137.5 197 42.6
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 2.7e-29 133.7 279 37.3
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 8.8e-28 128.6 143 46.2
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 5.7e-27 125.9 310 33.5
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 9.4e-22 108.6 222 35.1
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 1.6e-13 81.3 269 29.4
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 2.1e-13 80.9 55 65.5


User provided reference genes

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