Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0126600 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D009046 1.3e-88 329.7 164 100.0
Zm00001eb230930 Zea mays HOM05D002637 ORTHO05D009046 7.3e-44 181.0 165 55.2
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 2.7e-22 109.4 165 38.2
Phvul.010G051600 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 2.7e-22 109.4 165 35.2
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 3.0e-21 105.9 156 34.6
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 6.6e-21 104.8 133 39.1
HPP92_005363 Vanilla planifolia HOM05D002637 ORTHO05D009046 8.6e-21 104.4 171 34.5
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 1.1e-20 104.0 165 37.6
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 1.5e-20 103.6 151 35.8
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 1.9e-20 103.2 133 38.3
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 1.9e-20 103.2 160 38.1
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 2.5e-20 102.8 133 39.1
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 2.5e-20 102.8 133 37.6
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 2.5e-20 102.8 166 36.7
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 3.3e-20 102.4 133 39.1
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 3.3e-20 102.4 133 38.3
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 4.3e-20 102.1 165 37.0
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 4.3e-20 102.1 141 37.6
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 4.3e-20 102.1 165 32.7
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 5.6e-20 101.7 133 37.6
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 5.6e-20 101.7 165 37.6
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 9.5e-20 100.9 156 36.5
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 1.2e-19 100.5 162 35.8
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 1.2e-19 100.5 144 37.5
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 1.2e-19 100.5 155 37.4
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 1.6e-19 100.1 164 32.3
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 2.1e-19 99.8 158 36.1
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 2.8e-19 99.4 144 36.8
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 2.8e-19 99.4 144 36.8
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 6.2e-19 98.2 148 35.1
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 8.1e-19 97.8 148 36.5
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.4e-18 97.1 135 34.8
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 1.4e-18 97.1 151 35.8
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 1.8e-18 96.7 155 32.3
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 2.4e-18 96.3 152 34.9
RcHm_v2.0_Chr1g0347501 Rosa chinensis HOM05D002637 ORTHO05D009046 2.4e-18 96.3 151 31.8
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 4.0e-18 95.5 132 36.4
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 5.2e-18 95.1 153 33.3
Glyma.03G113700 Glycine max HOM05D002637 ORTHO05D009046 5.2e-18 95.1 145 35.9
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 8.9e-18 94.4 158 35.4
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 1.2e-17 94.0 155 31.6
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 1.2e-17 94.0 136 34.6
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.5e-17 93.6 135 35.6
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 2.0e-17 93.2 135 34.1
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 2.6e-17 92.8 143 37.8
ATR0057G030 Amborella trichopoda HOM05D002637 ORTHO05D009046 3.4e-17 92.4 146 32.9
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 3.4e-17 92.4 135 33.3
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 3.4e-17 92.4 135 33.3
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 4.4e-17 92.0 151 33.8
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 4.4e-17 92.0 154 32.5
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 9.9e-17 90.9 152 31.6
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 1.3e-16 90.5 135 34.8
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 1.3e-16 90.5 135 36.3
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 1.7e-16 90.1 155 32.3
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 2.2e-16 89.7 143 36.4
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 2.9e-16 89.4 132 37.9
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 3.8e-16 89.0 134 33.6
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 4.9e-16 88.6 142 33.1
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 4.9e-16 88.6 155 33.5
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 4.9e-16 88.6 131 35.1
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 8.4e-16 87.8 143 35.7
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 1.4e-15 87.0 149 33.6
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 1.9e-15 86.7 157 32.5
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 1.9e-15 86.7 158 29.1
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 1.9e-15 86.7 137 30.7
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 3.2e-15 85.9 159 30.8
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 3.2e-15 85.9 171 31.6
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 3.2e-15 85.9 131 35.9
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 7.1e-15 84.7 155 32.9
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 1.2e-14 84.0 150 33.3
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 1.6e-14 83.6 153 33.3
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 2.1e-14 83.2 142 33.8
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 3.5e-14 82.4 166 30.7
Ca_24158_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 1.7e-13 80.1 111 39.6
Peaxi162Scf00030g00043 Petunia axillaris HOM05D002637 ORTHO05D009046 1.7e-13 80.1 108 38.0
Sopen01g036190 Solanum pennellii HOM05D002637 ORTHO05D009046 2.3e-13 79.7 134 31.3
Nitab4.5_0003696g0080 Nicotiana tabacum HOM05D002637 ORTHO05D009046 3.0e-13 79.3 142 33.1
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 3.9e-13 79.0 158 27.8
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 3.9e-13 79.0 133 30.1
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 5.1e-13 78.6 131 31.3
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 5.1e-13 78.6 148 31.1
Duzib147G1684 Durio zibethinus HOM05D002637 ORTHO05D009046 5.1e-13 78.6 126 31.7
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 6.6e-13 78.2 149 30.2
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 6.6e-13 78.2 149 30.2
Ca_14062_v3 Cicer arietinum L. HOM05D000534 ORTHO05D009046 8.7e-13 77.8 111 39.6
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 1.5e-12 77.0 159 28.9
Glyma.07G113000 Glycine max HOM05D002637 ORTHO05D009046 1.9e-12 76.6 147 29.9
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 1.9e-12 76.6 142 30.3
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 2.5e-12 76.3 126 29.4
Hund17084 Selenicereus undatus HOM05D002637 ORTHO05D009046 4.3e-12 75.5 121 33.1
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 5.6e-12 75.1 135 29.6
AUR62013735 Chenopodium quinoa HOM05D002637 ORTHO05D009046 7.3e-12 74.7 105 39.0
GSVIVG01018261001 Vitis vinifera HOM05D002637 ORTHO05D009046 9.6e-12 74.3 124 33.1
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 2.8e-11 72.8 142 28.2
Aa31LG6G14300 Aethionema arabicum HOM05D002637 ORTHO05D009046 3.1e-10 69.3 151 29.8
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 5.2e-10 68.6 152 31.6
Phvul.008G046000 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 6.9e-10 68.2 105 38.1
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 9.0e-10 67.8 146 29.5
Rhsim01G0139600 Rhododendron simsii HOM05D002637 ORTHO05D009046 1.2e-09 67.4 102 36.3
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 1.5e-09 67.0 147 28.6
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 4.4e-09 65.5 91 38.5
Lj7A545G96 Lonicera japonica HOM05D002637 ORTHO05D009046 4.4e-09 65.5 114 33.3
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 9.9e-09 64.3 145 26.2
A01p01540 Brassica napus HOM05D002637 ORTHO05D009046 2.2e-08 63.2 79 39.2
FAN10G0921 Fragaria x ananassa HOM05D002637 ORTHO05D009046 2.2e-08 63.2 135 27.4
GSVIVG01018259001 Vitis vinifera HOM05D002637 ORTHO05D009046 2.2e-08 63.2 112 31.2
BcaNung03659 Brassica carinata HOM05D002637 ORTHO05D009046 2.9e-08 62.8 79 39.2
VMungo1383G0183 Vigna mungo HOM05D002637 ORTHO05D009046 8.4e-08 61.2 84 38.1
CSS0047370 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D009046 1.4e-07 60.5 78 37.2
TPR.G39072 Trifolium pratense HOM05D002637 ORTHO05D009046 1.4e-07 60.5 136 30.9


User provided reference genes

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