Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0113800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301000 2.1e-280 968.4 488 100.0
Os02g0113300 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301167 1.5e-265 919.1 489 95.9
Os02g0113900 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294256 1.5e-158 563.5 487 65.1
Os06g0489900 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297815 5.1e-61 239.6 441 40.4
Os10g0458300 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297170 2.4e-58 230.7 488 34.8
Os01g0776800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D030322 2.5e-55 220.7 477 36.1
Os06g0720400 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294711 5.1e-53 213.0 498 33.5
Os06g0722450 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D293796 5.1e-53 213.0 498 33.5
Os06g0722700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297080 5.1e-53 213.0 498 33.5
Os06g0723900 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301154 5.1e-53 213.0 498 33.5
Os06g0720700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D299104 3.3e-52 210.3 499 34.1
Os06g0719600 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D295390 1.3e-51 208.4 498 34.1
SGA_v2.0_scaffold112G31661 Striga asiatica HOM05D009542 ORTHO05D030322 2.2e-48 197.6 454 33.3
SGA_v2.0_scaffold555G52903 Striga asiatica HOM05D009542 ORTHO05D030322 2.2e-48 197.6 436 33.7
Os07g0258000 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301337 9.1e-42 175.6 304 40.5
Os05g0548700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D295144 7.9e-38 162.5 294 41.5
Os06g0722100 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D293739 5.2e-37 159.8 296 38.5
SGA_v2.0_scaffold5524G54649 Striga asiatica HOM05D009542 ORTHO05D030322 8.2e-35 152.5 300 34.3
Os11g0557400 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D300655 4.7e-30 136.7 265 36.2
Os02g0492500 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D298169 5.2e-29 133.3 462 29.0
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 5.2e-29 133.3 346 29.8
Os02g0793400 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D298023 1.2e-28 132.1 345 30.4
Os09g0558600 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294796 5.3e-26 123.2 422 27.3
Os07g0633300 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D296036 2.2e-24 117.9 242 37.2
Os03g0173700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301692 5.5e-23 113.2 504 25.8
Os12g0540000 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D293887 8.8e-21 105.9 300 31.0
Os04g0388000 Oryza sativa ssp. japonica HOM05D032120 ORTHO05D300183 8.6e-16 89.4 485 25.8
Os05g0332250 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D296551 2.5e-15 87.8 183 35.0
SGA_v2.0_scaffold43G16234 Striga asiatica HOM05D009542 ORTHO05D402718 8.0e-14 82.8 160 35.0
Os03g0179200 Oryza sativa ssp. japonica HOM05D032120 ORTHO05D295265 8.0e-06 56.2 101 38.6


User provided reference genes

Program Settings