Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 4.5e-144 514.6 264 100.0
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 4.2e-102 375.2 263 75.3
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 7.3e-54 214.9 253 53.0
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 1.6e-53 213.8 244 54.5
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 8.1e-53 211.5 245 51.4
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 1.1e-52 211.1 245 51.4
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 1.1e-52 211.1 263 49.0
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 1.8e-52 210.3 251 53.8
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 1.8e-52 210.3 270 51.5
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 5.2e-52 208.8 248 53.2
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 5.2e-52 208.8 266 51.1
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 1.2e-51 207.6 248 50.8
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 2.6e-51 206.5 258 48.8
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 4.4e-51 205.7 258 51.2
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 5.8e-51 205.3 267 49.4
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 7.6e-51 204.9 248 53.2
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.3e-50 204.1 248 52.4
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 1.7e-50 203.8 262 48.9
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 1.7e-50 203.8 261 50.6
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 1.7e-50 203.8 261 48.7
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 1.7e-50 203.8 241 50.6
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 2.2e-50 203.4 245 51.0
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 2.2e-50 203.4 258 51.2
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 2.2e-50 203.4 265 49.4
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 2.9e-50 203.0 262 48.9
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 2.9e-50 203.0 246 48.0
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 3.7e-50 202.6 264 47.3
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 3.7e-50 202.6 265 48.7
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 4.9e-50 202.2 262 48.5
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 4.9e-50 202.2 244 52.0
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 8.4e-50 201.4 247 50.6
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 1.1e-49 201.1 262 48.5
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 1.1e-49 201.1 262 48.5
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 1.1e-49 201.1 247 51.0
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 1.9e-49 200.3 267 47.6
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 1.9e-49 200.3 246 52.4
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 2.4e-49 199.9 246 51.2
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 2.4e-49 199.9 246 51.6
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 3.2e-49 199.5 265 49.4
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 3.2e-49 199.5 265 49.4
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 4.1e-49 199.1 244 51.6
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 7.1e-49 198.4 244 49.2
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 9.2e-49 198.0 245 50.6
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 1.2e-48 197.6 249 50.6
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 1.2e-48 197.6 249 49.4
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 1.6e-48 197.2 243 51.9
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 1.6e-48 197.2 267 49.4
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 2.1e-48 196.8 249 49.4
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 2.1e-48 196.8 246 50.8
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 2.1e-48 196.8 254 52.0
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 2.7e-48 196.4 247 49.8
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 3.5e-48 196.1 269 49.1
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 4.6e-48 195.7 263 50.6
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 6.0e-48 195.3 243 51.0
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 1.0e-47 194.5 280 48.6
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 1.3e-47 194.1 243 49.8
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 1.7e-47 193.7 250 47.6
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 2.3e-47 193.4 244 51.2
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 3.0e-47 193.0 256 47.7
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 3.9e-47 192.6 245 50.6
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 3.9e-47 192.6 262 48.5
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 5.1e-47 192.2 256 49.6
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 5.1e-47 192.2 297 44.4
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 6.6e-47 191.8 263 47.5
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 1.1e-46 191.0 251 46.2
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 1.9e-46 190.3 245 47.8
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 1.9e-46 190.3 252 51.2
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 2.5e-46 189.9 267 49.4
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 4.3e-46 189.1 248 47.2
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 7.3e-46 188.3 248 46.8
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 1.2e-45 187.6 265 46.8
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 8.1e-45 184.9 242 48.8
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 1.8e-44 183.7 264 46.2
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 6.8e-44 181.8 257 47.1
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 1.2e-43 181.0 235 49.8
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 1.2e-43 181.0 274 42.7
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 2.0e-43 180.3 256 46.1
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 9.9e-43 177.9 244 48.4
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 3.8e-42 176.0 248 46.4
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 1.2e-40 171.0 329 40.7
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 2.7e-40 169.9 250 45.6
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 1.0e-39 167.9 259 44.0
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 1.3e-39 167.5 146 61.0
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 1.9e-38 163.7 242 47.9
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 1.9e-38 163.7 250 44.0
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 1.3e-37 161.0 230 46.1
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 2.1e-37 160.2 246 43.5
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 6.2e-37 158.7 245 44.5
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 1.1e-36 157.9 259 43.2
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 2.2e-34 150.2 263 41.8
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 4.6e-32 142.5 290 40.3
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 8.7e-31 138.3 246 38.2
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 1.1e-30 137.9 201 41.8
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 9.6e-30 134.8 295 38.6
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 2.2e-26 123.6 210 43.3
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 5.5e-25 119.0 185 47.0
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 1.2e-24 117.9 204 37.7
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 2.1e-24 117.1 255 36.1
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 6.0e-24 115.5 153 47.1
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 6.0e-24 115.5 153 47.1
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 1.8e-23 114.0 246 39.4
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 2.3e-23 113.6 183 43.7
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 8.7e-23 111.7 248 38.7
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 1.1e-22 111.3 258 35.3
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 3.3e-22 109.8 264 35.2
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 3.3e-22 109.8 189 39.7
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 4.3e-22 109.4 251 37.8
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 5.3e-20 102.4 157 41.4
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 1.5e-19 100.9 81 63.0
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 3.4e-19 99.8 200 38.0
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 4.5e-19 99.4 150 43.3
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 1.0e-18 98.2 156 41.7
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 2.9e-18 96.7 289 29.8
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 4.9e-18 95.9 163 42.3
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 3.2e-17 93.2 65 72.3
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 4.2e-17 92.8 76 64.5
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 6.0e-16 89.0 62 71.0
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 8.7e-15 85.1 203 35.5
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 2.1e-13 80.5 66 60.6
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 2.2e-10 70.5 216 29.2
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 1.2e-08 64.7 73 52.1
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 9.7e-06 55.1 88 39.8


User provided reference genes

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