Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0962400 Oryza sativa ssp. japonica HOM05D005652 ORTHO05D007300 1.3e-43 179.5 103 100.0
Ah.05g172270 Amaranthus hybridus HOM05D005652 ORTHO05D007300 8.0e-41 170.2 89 96.6
PSO170G5049 Papaver somniferum HOM05D005652 ORTHO05D007300 2.3e-40 168.7 85 98.8
Hund16832 Selenicereus undatus HOM05D005652 ORTHO05D007300 6.8e-40 167.2 86 97.7
PSO528G0083 Papaver somniferum HOM05D005652 ORTHO05D007300 1.2e-39 166.4 85 97.6
PGSC0003DMG400030853 Solanum tuberosum HOM05D005652 ORTHO05D007300 1.2e-39 166.4 89 94.4
Hund27043 Selenicereus undatus HOM05D005652 ORTHO05D007300 1.5e-39 166.0 89 94.4
Solyc12g096120.2 Solanum lycopersicum HOM05D005652 ORTHO05D007300 1.5e-39 166.0 89 93.3
Sopen12g032000 Solanum pennellii HOM05D005652 ORTHO05D007300 1.5e-39 166.0 89 93.3
arahy.Tifrunner.gnm1.ann1.KZ1VTZ Arachis hypogaea HOM05D005652 ORTHO05D007300 2.0e-39 165.6 83 98.8
Migut.N03303 Erythranthe guttata HOM05D005652 ORTHO05D007300 2.0e-39 165.6 83 98.8
PGSC0003DMG400029291 Solanum tuberosum HOM05D005652 ORTHO05D007300 2.0e-39 165.6 89 93.3
THA.LOC104813142 Tarenaya hassleriana HOM05D005652 ORTHO05D007300 2.0e-39 165.6 86 96.5
CAN.G1483.5 Capsicum annuum HOM05D005652 ORTHO05D007300 2.6e-39 165.2 89 93.3
Nn5g28127 Nelumbo nucifera HOM05D005652 ORTHO05D007300 2.6e-39 165.2 84 97.6
GSVIVG01008919001 Vitis vinifera HOM05D005652 ORTHO05D007300 2.6e-39 165.2 85 96.5
Nitab4.5_0000943g0120 Nicotiana tabacum HOM05D005652 ORTHO05D007300 3.4e-39 164.9 89 93.3
Nitab4.5_0014082g0020 Nicotiana tabacum HOM05D005652 ORTHO05D007300 3.4e-39 164.9 89 93.3
Zm00001eb140360 Zea mays HOM05D005652 ORTHO05D007300 3.4e-39 164.9 84 96.4
EL10Ac1g00017 Beta vulgaris HOM05D005652 ORTHO05D007300 5.8e-39 164.1 89 93.3
Duzib093G1773 Durio zibethinus HOM05D005652 ORTHO05D007300 5.8e-39 164.1 85 95.3
Eucgr.F03755 Eucalyptus grandis HOM05D005652 ORTHO05D007300 5.8e-39 164.1 86 94.2
Sc23g0000830 Simmondsia chinensis HOM05D005652 ORTHO05D007300 5.8e-39 164.1 84 96.4
Atru.chr13.1343 Acer truncatum HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
arahy.Tifrunner.gnm1.ann1.AJPJ4J Arachis hypogaea HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
CSS0012578 Camellia sinensis var. sinensis HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
CANSAT54G2625 Cannabis sativa HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
CiPaw.05G226800 Carya illinoinensis HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Ca_19025_v3 Cicer arietinum L. HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Ca_26775_v3 Cicer arietinum L. HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
ClCG03G009400 Citrullus lanatus HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Ciclev10002945m.g Citrus clementina HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Cc06_g19090 Coffea canephora HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
MELO3C003038.2 Cucumis melo HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
CsaV3_5G023210 Cucumis sativus L. HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Dinv27358 Davidia involucrata HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Duzib041G0199 Durio zibethinus HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Glyma.04G252400 Glycine max HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Glyma.06G110100 Glycine max HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Glyma.14G163800 Glycine max HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Gohir.A06G041900 Gossypium hirsutum HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Gohir.D06G042900 Gossypium hirsutum HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Gorai.005G091100 Gossypium raimondii HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Gorai.010G048100 Gossypium raimondii HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Hma1.2p1_0009F.1_g006210 Hydrangea macrophylla HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Lj1g0016776 Lotus japonicus HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Lalb_Chr08g0241571 Lupinus albus HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Lalb_Chr23g0270881 Lupinus albus HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
MBI09_g06382_MAGBIO Magnolia biondii HOM05D005652 ORTHO05D007300 7.5e-39 163.7 84 96.4
MD08G1169400 Malus domestica HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
MD15G1356000 Malus domestica HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Manes.18G074500 Manihot esculenta HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Medtr5g059210 Medicago truncatula HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Nitab4.5_0000030g0080 Nicotiana tabacum HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Oeu050889.1 Olea europaea HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Peaxi162Scf00408g00839 Petunia axillaris HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Peaxi162Scf00876g00433 Petunia axillaris HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Phvul.009G121900 Phaseolus vulgaris HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Psat2g096080 Pisum sativum HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Potri.002G087200 Populus trichocarpa HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
RcHm_v2.0_Chr6g0294951 Rosa chinensis HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Sabra02G0068700 Salix brachista HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Sed0000902 Sechium edule HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Solyc08g075780.4 Solanum lycopersicum HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
THA.LOC104817112 Tarenaya hassleriana HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
Thecc.08G119900 Theobroma cacao HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
TWI12G1472 Tripterygium wilfordii HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
TWI56G0667 Tripterygium wilfordii HOM05D005652 ORTHO05D007300 7.5e-39 163.7 83 97.6
FAN20G1151 Fragaria x ananassa HOM05D005652 ORTHO05D007300 9.8e-39 163.3 84 95.2
FAN24G1202 Fragaria x ananassa HOM05D000102 ORTHO05D003793 9.8e-39 163.3 84 95.2
FAN27G1241 Fragaria x ananassa HOM05D005652 ORTHO05D007300 9.8e-39 163.3 84 95.2
SalBow7G3105 Salvia bowleyana HOM05D005652 ORTHO05D007300 9.8e-39 163.3 83 96.4
Lsat_1_v5_gn_5_65281 Lactuca sativa HOM05D005652 ORTHO05D007300 1.3e-38 162.9 83 96.4
ATR0041G005 Amborella trichopoda HOM05D005652 ORTHO05D007300 1.7e-38 162.5 84 95.2
Aqoxy6G01736 Aquilegia oxysepala HOM05D005652 ORTHO05D007300 1.7e-38 162.5 83 96.4
MSTRG.22423 Avicennia marina HOM05D005652 ORTHO05D007300 1.7e-38 162.5 83 96.4
Nitab4.5_0013867g0020 Nicotiana tabacum HOM05D005652 ORTHO05D007300 1.7e-38 162.5 83 96.4
Oeu050252.1 Olea europaea HOM05D005652 ORTHO05D007300 1.7e-38 162.5 83 96.4
Potri.005G173800 Populus trichocarpa HOM05D005652 ORTHO05D007300 1.7e-38 162.5 83 96.4
Prupe.1G503300 Prunus persica HOM05D005652 ORTHO05D007300 1.7e-38 162.5 83 96.4
PGR042G1865 Punica granatum HOM05D005652 ORTHO05D007300 1.7e-38 162.5 83 96.4
TPR.G8501 Trifolium pratense HOM05D005652 ORTHO05D007300 1.7e-38 162.5 83 96.4
TAR376G0464 Trochodendron aralioides HOM05D005652 ORTHO05D007300 1.7e-38 162.5 83 96.4
AT1G77710 Arabidopsis thaliana HOM05D005652 ORTHO05D007300 2.2e-38 162.2 84 94.0
CDE06G1598 Ceratophyllum demersum HOM05D005652 ORTHO05D007300 2.2e-38 162.2 82 97.6
CDE08G1473 Ceratophyllum demersum HOM05D005652 ORTHO05D007300 2.2e-38 162.2 82 97.6
FvH4_2g26390 Fragaria vesca HOM05D005652 ORTHO05D007300 2.2e-38 162.2 84 94.0
HanXRQChr14g0432351 Helianthus annuus HOM05D005652 ORTHO05D007300 2.2e-38 162.2 83 96.4
Aa31LG4G7830 Aethionema arabicum HOM05D005652 ORTHO05D007300 2.9e-38 161.8 83 95.2
AL2G37930 Arabidopsis lyrata HOM05D005652 ORTHO05D007300 2.9e-38 161.8 83 95.2
BcaB02g07127 Brassica carinata HOM05D005652 ORTHO05D007300 2.9e-38 161.8 83 95.2
BcaB05g25069 Brassica carinata HOM05D005652 ORTHO05D007300 2.9e-38 161.8 83 95.2
BcaC03g15763 Brassica carinata HOM05D005652 ORTHO05D007300 2.9e-38 161.8 83 95.2
BcaC08g45458 Brassica carinata HOM05D005652 ORTHO05D007300 2.9e-38 161.8 83 95.2
A07p27870 Brassica napus HOM05D005652 ORTHO05D007300 2.9e-38 161.8 83 95.2
C06p30860 Brassica napus HOM05D005652 ORTHO05D007300 2.9e-38 161.8 83 95.2
BolC6t38248H Brassica oleracea HOM05D005652 ORTHO05D007300 2.9e-38 161.8 83 95.2
BraA07t30426Z Brassica rapa HOM05D005652 ORTHO05D007300 2.9e-38 161.8 83 95.2
Carub.0002s2459 Capsella rubella HOM05D005652 ORTHO05D007300 2.9e-38 161.8 83 95.2
CARHR071220 Cardamine hirsuta HOM05D005652 ORTHO05D007300 2.9e-38 161.8 83 95.2
Gohir.A02G074200 Gossypium hirsutum HOM05D005652 ORTHO05D007300 2.9e-38 161.8 83 96.4
Sp5g32880 Schrenkiella parvula HOM05D005652 ORTHO05D007300 2.9e-38 161.8 83 95.2
unitig_37.g12684 Utricularia gibba HOM05D005652 ORTHO05D007300 2.9e-38 161.8 83 96.4
MSTRG.1473 Avicennia marina HOM05D005652 ORTHO05D007300 3.7e-38 161.4 82 97.6
Migut.C01167 Erythranthe guttata HOM05D005652 ORTHO05D007300 3.7e-38 161.4 81 98.8
SGA_v2.0_scaffold24G10489 Striga asiatica HOM05D005652 ORTHO05D007300 3.7e-38 161.4 83 96.4
Thhalv10019370m.g Eutrema salsugineum HOM05D005652 ORTHO05D007300 6.4e-38 160.6 83 94.0
Haze_00495 Corylus avellana HOM05D000102 ORTHO05D003793 8.3e-38 160.2 82 96.3
Gohir.D02G081400 Gossypium hirsutum HOM05D005652 ORTHO05D007300 8.3e-38 160.2 83 96.4
AagrBONN_evm.TU.Sc2ySwM_362.1619 Anthoceros agrestis HOM05D005652 ORTHO05D007300 7.0e-37 157.1 86 88.4
Pp3c6_16720 Physcomitrium patens HOM05D005652 ORTHO05D007300 7.0e-37 157.1 82 93.9
ECA238G1260 Erigeron canadensis HOM05D005652 ORTHO05D007300 9.2e-37 156.8 80 96.2
Mapoly0081s0039 Marchantia polymorpha HOM05D005652 ORTHO05D007300 1.2e-36 156.4 84 90.5
CBR_g44443 Chara braunii HOM05D005652 ORTHO05D007300 1.6e-36 156.0 82 92.7
Actinidia02604 Actinidia chinensis HOM05D005652 ORTHO05D007300 1.1e-34 149.8 103 77.7
SMO147G0269 Selaginella moellendorffii HOM05D005652 ORTHO05D007300 1.1e-34 149.8 82 89.0
FAN15G0151 Fragaria x ananassa HOM05D000102 ORTHO05D003793 7.3e-34 147.1 108 73.1
Haze_27250 Corylus avellana HOM05D005652 ORTHO05D007300 1.9e-29 132.5 80 78.8
AUR62023629 Chenopodium quinoa HOM05D000102 ORTHO05D003793 2.4e-29 132.1 70 94.3
Rhsim11G0066600 Rhododendron simsii HOM05D005652 ORTHO05D007300 3.2e-29 131.7 69 95.7
CAN.G947.38 Capsicum annuum HOM05D005652 ORTHO05D007300 1.6e-28 129.4 64 100.0
PRCOL_00001930 Prasinoderma coloniale HOM05D005652 ORTHO05D007300 7.8e-28 127.1 81 81.5
Glyma.13G082800 Glycine max HOM05D005652 ORTHO05D007300 2.3e-27 125.6 64 96.9
QL09p036189 Quercus lobata HOM05D005652 ORTHO05D007300 5.1e-27 124.4 87 78.2
Oeu026729.1 Olea europaea HOM05D005652 ORTHO05D007300 1.1e-26 123.2 63 96.8
SalBow7G1395 Salvia bowleyana HOM05D005652 ORTHO05D007300 7.3e-26 120.6 62 95.2
HPP92_028057 Vanilla planifolia HOM05D005652 ORTHO05D007300 5.8e-23 110.9 77 77.9
Cpa.g.sc36.14 Carica papaya HOM05D005652 ORTHO05D007300 1.0e-19 100.1 61 85.2
AUR62004713 Chenopodium quinoa HOM05D005652 ORTHO05D007300 1.7e-19 99.4 51 98.0
COL.COLO4_38344 Corchorus olitorius HOM05D005652 ORTHO05D007300 2.3e-19 99.0 51 96.1
Oeu062544.1 Olea europaea HOM05D005652 ORTHO05D007300 5.1e-19 97.8 62 83.9
BraA02t07181Z Brassica rapa HOM05D005652 ORTHO05D007300 1.5e-18 96.3 64 79.7
BolC2t09520H Brassica oleracea HOM05D005652 ORTHO05D007300 2.1e-17 92.4 45 95.6
Actinidia13808 Actinidia chinensis HOM05D005652 ORTHO05D007300 1.1e-16 90.1 50 88.0
Sed0022236 Sechium edule HOM05D005652 ORTHO05D007300 3.1e-16 88.6 86 61.6
AagrBONN_evm.TU.Sc2ySwM_344.240 Anthoceros agrestis HOM05D005652 ORTHO05D007300 7.3e-10 67.4 40 80.0
TAR381G0412 Trochodendron aralioides HOM05D000102 ORTHO05D003793 1.1e-08 63.5 32 96.9
Dinv20715 Davidia involucrata HOM05D005652 ORTHO05D185765 2.9e-06 55.5 39 71.8
Actinidia34351 Actinidia chinensis HOM05D005652 ORTHO05D057191 4.9e-06 54.7 32 81.2


User provided reference genes

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