Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 1.4e-46 189.1 88 100.0
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 1.4e-41 172.6 86 90.7
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 1.8e-41 172.2 86 89.5
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 2.4e-41 171.8 86 91.9
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 3.1e-41 171.4 86 90.7
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 4.0e-41 171.0 86 90.7
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 6.9e-41 170.2 86 89.5
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 9.0e-41 169.9 86 89.5
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 1.2e-40 169.5 86 90.7
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 1.2e-40 169.5 85 90.6
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 1.2e-40 169.5 86 88.4
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 1.5e-40 169.1 86 88.4
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 1.5e-40 169.1 86 88.4
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 1.5e-40 169.1 86 88.4
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 2.0e-40 168.7 86 87.2
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.0e-40 168.7 86 87.2
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.0e-40 168.7 86 87.2
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.0e-40 168.7 86 87.2
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.0e-40 168.7 86 87.2
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 2.6e-40 168.3 86 88.4
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 2.6e-40 168.3 86 88.4
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 2.6e-40 168.3 86 87.2
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 2.6e-40 168.3 86 89.5
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 3.4e-40 167.9 86 89.5
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 3.4e-40 167.9 86 86.0
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 3.4e-40 167.9 86 86.0
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 3.4e-40 167.9 86 86.0
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 3.4e-40 167.9 86 89.5
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 4.5e-40 167.5 86 89.5
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 4.5e-40 167.5 86 87.2
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 4.5e-40 167.5 86 88.4
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 4.5e-40 167.5 86 88.4
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 4.5e-40 167.5 86 87.2
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 4.5e-40 167.5 86 88.4
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 5.8e-40 167.2 86 87.2
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 5.8e-40 167.2 86 87.2
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 5.8e-40 167.2 86 86.0
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 5.8e-40 167.2 86 88.4
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 5.8e-40 167.2 86 88.4
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 7.6e-40 166.8 86 86.0
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 7.6e-40 166.8 86 88.4
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 7.6e-40 166.8 86 86.0
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 7.6e-40 166.8 86 87.2
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 7.6e-40 166.8 85 88.2
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 9.9e-40 166.4 86 86.0
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 9.9e-40 166.4 86 87.2
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 9.9e-40 166.4 86 88.4
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 1.3e-39 166.0 86 87.2
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 1.3e-39 166.0 86 86.0
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 1.3e-39 166.0 86 86.0
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 1.3e-39 166.0 86 86.0
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 1.7e-39 165.6 86 86.0
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 1.7e-39 165.6 86 86.0
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 2.2e-39 165.2 86 87.2
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 2.2e-39 165.2 86 87.2
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 2.2e-39 165.2 86 87.2
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 2.2e-39 165.2 86 87.2
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 2.9e-39 164.9 86 83.7
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 2.9e-39 164.9 86 83.7
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 3.8e-39 164.5 86 83.7
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 4.9e-39 164.1 86 86.0
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 4.9e-39 164.1 86 86.0
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 6.4e-39 163.7 86 86.0
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 6.4e-39 163.7 86 84.9
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 6.4e-39 163.7 86 84.9
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 6.4e-39 163.7 86 84.9
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 6.4e-39 163.7 86 84.9
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 6.4e-39 163.7 86 88.4
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 1.4e-38 162.5 86 86.0
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 1.9e-38 162.2 85 85.9
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 2.4e-38 161.8 86 83.7
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 5.4e-38 160.6 86 83.7
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 5.4e-38 160.6 86 84.9
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 1.2e-37 159.5 84 85.7
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 1.0e-36 156.4 86 83.7
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 1.0e-36 156.4 76 93.4
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 3.0e-36 154.8 83 85.5
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 3.9e-36 154.5 86 82.6
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 1.5e-35 152.5 80 86.2
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 1.5e-35 152.5 76 90.8
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 1.9e-35 152.1 80 85.0
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 2.5e-35 151.8 77 89.6
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 2.5e-35 151.8 108 69.4
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 4.3e-35 151.0 76 89.5
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 5.6e-35 150.6 84 77.4
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 3.7e-34 147.9 84 79.8
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 4.8e-34 147.5 77 90.9
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 6.2e-34 147.1 75 89.3
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 8.1e-34 146.7 80 83.8
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 1.4e-33 146.0 76 81.6
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 1.8e-33 145.6 77 87.0
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 1.8e-33 145.6 76 86.8
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 2.4e-33 145.2 75 89.3
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 3.4e-32 141.4 75 86.7
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 3.8e-31 137.9 79 78.5
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 2.5e-30 135.2 83 72.3
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 7.1e-30 133.7 100 66.0
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 7.1e-30 133.7 86 74.4
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 3.5e-29 131.3 86 73.3
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 7.9e-29 130.2 68 85.3
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 3.1e-25 118.2 61 86.9
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 1.3e-18 96.3 49 87.8
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 5.9e-16 87.4 42 90.5


User provided reference genes

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