Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0930500 Oryza sativa ssp. japonica HOM05D001131 ORTHO05D000972 8.6e-99 364.0 233 100.0
Ciclev10016745m.g Citrus clementina HOM05D001131 ORTHO05D000972 2.1e-20 103.6 234 38.0
QL02p068251 Quercus lobata HOM05D001131 ORTHO05D000972 8.0e-20 101.7 232 37.1
COL.COLO4_13403 Corchorus olitorius HOM05D001131 ORTHO05D000972 1.5e-18 97.4 230 38.3
MBI07_g42010_MAGBIO Magnolia biondii HOM05D001131 ORTHO05D000972 2.6e-18 96.7 219 37.0
Potri.014G139900 Populus trichocarpa HOM05D001131 ORTHO05D000972 3.3e-18 96.3 226 36.7
Thecc.04G051500 Theobroma cacao HOM05D001131 ORTHO05D000972 3.3e-18 96.3 219 35.6
Manes.04G096900 Manihot esculenta HOM05D001131 ORTHO05D000972 8.2e-17 91.7 227 35.2
GSVIVG01032948001 Vitis vinifera HOM05D001131 ORTHO05D000972 8.2e-17 91.7 230 36.1
TAR371G0961 Trochodendron aralioides HOM05D001131 ORTHO05D000972 1.1e-16 91.3 234 35.5
Atru.chr6.2730 Acer truncatum HOM05D001131 ORTHO05D000972 5.3e-16 89.0 228 40.4
Glyma.02G068100 Glycine max HOM05D001131 ORTHO05D000972 9.1e-16 88.2 220 33.2
PGR142G2262 Punica granatum HOM05D001131 ORTHO05D000972 9.1e-16 88.2 230 34.3
PSO017G4821 Papaver somniferum HOM05D001131 ORTHO05D000972 1.2e-15 87.8 238 33.6
Haze_14986 Corylus avellana HOM05D001131 ORTHO05D000972 1.6e-15 87.4 231 34.6
Aqoxy3G01772 Aquilegia oxysepala HOM05D001131 ORTHO05D000972 2.6e-15 86.7 226 33.6
Aqoxy5G02997 Aquilegia oxysepala HOM05D001131 ORTHO05D000972 2.6e-15 86.7 227 31.3
Manes.11G073300 Manihot esculenta HOM05D001131 ORTHO05D000972 4.5e-15 85.9 225 33.3
PSO478G1201 Papaver somniferum HOM05D001131 ORTHO05D000972 7.7e-15 85.1 238 32.4
Phvul.004G067900 Phaseolus vulgaris HOM05D001131 ORTHO05D000972 1.0e-14 84.7 228 32.5
HPP92_013554 Vanilla planifolia HOM05D001131 ORTHO05D000972 1.0e-14 84.7 228 32.5
VMungo0464G2064 Vigna mungo HOM05D001131 ORTHO05D000972 1.3e-14 84.3 231 35.9
Eucgr.I01569 Eucalyptus grandis HOM05D001131 ORTHO05D000972 1.7e-14 84.0 227 33.0
Glyma.16G045300 Glycine max HOM05D001131 ORTHO05D000972 5.0e-14 82.4 240 32.1
Glyma.16G149600 Glycine max HOM05D001131 ORTHO05D000972 1.9e-13 80.5 225 32.0
Phvul.001G098600 Phaseolus vulgaris HOM05D001131 ORTHO05D000972 4.2e-13 79.3 239 33.5
arahy.Tifrunner.gnm1.ann1.I6Q85W Arachis hypogaea HOM05D001131 ORTHO05D000972 5.5e-13 79.0 238 31.1
Psat3g092840 Pisum sativum HOM05D001131 ORTHO05D000972 5.5e-13 79.0 227 30.4
CDE05G1753 Ceratophyllum demersum HOM05D001131 ORTHO05D000972 1.6e-12 77.4 222 31.1
Cfa007137 Carpinus fangiana HOM05D001131 ORTHO05D000972 2.1e-12 77.0 223 32.3
Lj1g0026347 Lotus japonicus HOM05D001131 ORTHO05D000972 2.7e-12 76.6 226 38.5
TPR.G31652 Trifolium pratense HOM05D001131 ORTHO05D000972 2.7e-12 76.6 232 30.2
TAR629G3365 Trochodendron aralioides HOM05D001131 ORTHO05D000972 2.7e-12 76.6 226 30.5
TWI81G1099 Tripterygium wilfordii HOM05D001131 ORTHO05D000972 3.6e-12 76.3 239 31.4
SEGI_15713 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 6.1e-12 75.5 237 31.2
Medtr7g084690 Medicago truncatula HOM05D001131 ORTHO05D000972 8.0e-12 75.1 230 35.7
Lalb_Chr24g0402971 Lupinus albus HOM05D001131 ORTHO05D000972 1.0e-11 74.7 224 28.6
Glyma.19G106400 Glycine max HOM05D001131 ORTHO05D000972 1.4e-11 74.3 233 30.5
TPR.G31655 Trifolium pratense HOM05D001131 ORTHO05D000972 1.4e-11 74.3 230 30.9
VMungo1383G1930 Vigna mungo HOM05D001131 ORTHO05D000972 1.4e-11 74.3 235 32.8
TPR.G31665 Trifolium pratense HOM05D001131 ORTHO05D000972 2.0e-10 70.5 226 29.6
MELO3C014759.2 Cucumis melo HOM05D001131 ORTHO05D000972 1.3e-09 67.8 230 30.0
Eucgr.G01914 Eucalyptus grandis HOM05D001131 ORTHO05D000972 1.3e-09 67.8 214 31.8
TPR.G31661 Trifolium pratense HOM05D001131 ORTHO05D000972 1.3e-09 67.8 230 28.7
Nn4g22074 Nelumbo nucifera HOM05D001131 ORTHO05D000972 4.8e-09 65.9 77 54.5
ClCG05G012470 Citrullus lanatus HOM05D001131 ORTHO05D000972 1.4e-08 64.3 232 28.4
MBI11_g23198_MAGBIO Magnolia biondii HOM05D001131 ORTHO05D000972 1.8e-08 63.9 189 31.2
ATR0582G208 Amborella trichopoda HOM05D001131 ORTHO05D000972 7.0e-08 62.0 228 28.5
Sed0004223 Sechium edule HOM05D001131 ORTHO05D000972 9.1e-08 61.6 223 29.1
Eucgr.L01395 Eucalyptus grandis HOM05D001131 ORTHO05D000972 1.2e-07 61.2 217 29.0
EL10Ac6g13907 Beta vulgaris HOM05D001131 ORTHO05D000972 1.6e-07 60.8 226 37.6
SEGI_22681 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 1.6e-07 60.8 226 28.8
Eucgr.L01394 Eucalyptus grandis HOM05D001131 ORTHO05D000972 1.0e-06 58.2 221 30.3
FvH4_1g05960 Fragaria vesca HOM05D001131 ORTHO05D000972 1.3e-06 57.8 242 31.4
Prupe.7G221500 Prunus persica HOM05D001131 ORTHO05D000972 1.3e-06 57.8 233 30.5
SGA_v2.0_scaffold4G02021 Striga asiatica HOM05D001131 ORTHO05D000972 1.3e-06 57.8 219 32.0
FAN19G0216 Fragaria x ananassa HOM05D001131 ORTHO05D000972 1.7e-06 57.4 242 31.0
FvH4_6g32270 Fragaria vesca HOM05D001131 ORTHO05D000972 5.0e-06 55.8 218 33.9
arahy.Tifrunner.gnm1.ann1.LR2U11 Arachis hypogaea HOM05D001131 ORTHO05D000972 6.5e-06 55.5 215 29.8
QL05p020368 Quercus lobata HOM05D001131 ORTHO05D000972 6.5e-06 55.5 219 31.1
Rhsim08G0226800 Rhododendron simsii HOM05D001131 ORTHO05D000972 6.5e-06 55.5 236 27.1
Phvul.005G166700 Phaseolus vulgaris HOM05D001131 ORTHO05D000972 8.5e-06 55.1 229 25.3


User provided reference genes

Program Settings