Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 1.0e-112 410.2 234 100.0
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 8.6e-91 337.4 230 74.8
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 7.9e-68 261.2 173 68.8
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 5.1e-67 258.5 174 70.1
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 1.5e-66 256.9 175 66.3
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 3.3e-66 255.8 160 71.2
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 3.3e-66 255.8 166 70.5
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 4.3e-66 255.4 172 66.9
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 3.7e-65 252.3 161 69.6
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 6.2e-65 251.5 172 66.9
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 1.1e-64 250.8 161 68.9
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 1.4e-64 250.4 160 70.0
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 1.4e-64 250.4 161 68.9
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 1.8e-64 250.0 175 69.1
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 2.4e-64 249.6 161 72.7
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 4.0e-64 248.8 175 66.9
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 6.9e-64 248.1 162 70.4
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 9.0e-64 247.7 172 66.9
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 9.0e-64 247.7 172 66.3
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 1.2e-63 247.3 161 67.7
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 1.2e-63 247.3 156 70.5
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 1.5e-63 246.9 172 64.5
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 1.5e-63 246.9 160 68.1
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 2.0e-63 246.5 161 70.8
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 2.0e-63 246.5 172 64.5
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 2.6e-63 246.1 168 67.9
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 4.5e-63 245.4 158 67.7
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 4.5e-63 245.4 173 64.2
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 5.8e-63 245.0 174 63.2
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 5.8e-63 245.0 166 68.7
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 1.0e-62 244.2 172 64.0
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 1.3e-62 243.8 167 65.9
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.3e-62 243.8 167 65.9
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 1.7e-62 243.4 173 64.7
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 1.7e-62 243.4 160 69.4
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 1.7e-62 243.4 158 70.3
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 2.2e-62 243.0 197 58.4
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 2.9e-62 242.7 165 65.5
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 2.9e-62 242.7 159 68.6
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 6.5e-62 241.5 173 64.7
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 6.5e-62 241.5 166 63.3
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 6.5e-62 241.5 156 69.2
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 8.4e-62 241.1 161 65.8
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 8.4e-62 241.1 166 64.5
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 1.1e-61 240.7 172 64.5
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.1e-61 240.7 166 66.3
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.1e-61 240.7 166 66.3
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 1.1e-61 240.7 168 66.1
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 1.9e-61 240.0 160 69.4
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 2.5e-61 239.6 175 64.0
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 3.2e-61 239.2 160 66.9
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 7.1e-61 238.0 161 68.9
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 1.2e-60 237.3 159 67.3
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 2.1e-60 236.5 166 67.5
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 2.7e-60 236.1 160 65.6
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 3.5e-60 235.7 158 64.6
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 4.6e-60 235.3 156 69.9
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 6.0e-60 235.0 160 70.0
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 7.9e-60 234.6 161 67.7
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 1.0e-59 234.2 159 64.8
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 1.0e-59 234.2 152 65.8
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 1.3e-59 233.8 170 64.1
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 2.3e-59 233.0 157 66.9
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 3.3e-58 229.2 155 67.1
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 4.3e-58 228.8 168 64.9
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 1.3e-57 227.3 176 60.8
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 6.3e-57 224.9 167 64.1
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 8.2e-57 224.6 169 64.5
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 1.8e-56 223.4 172 59.9
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 5.3e-56 221.9 153 67.3
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 6.9e-56 221.5 166 60.8
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 9.0e-56 221.1 172 59.3
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 2.0e-55 219.9 166 60.2
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 2.0e-55 219.9 166 60.2
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 2.0e-55 219.9 166 60.2
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 2.0e-55 219.9 166 60.2
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 2.0e-55 219.9 166 60.2
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 3.8e-54 215.7 166 59.0
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 8.5e-54 214.5 166 59.6
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 4.2e-53 212.2 172 58.7
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 5.5e-53 211.8 172 58.1
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 9.3e-53 211.1 172 57.6
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 3.0e-51 206.1 133 69.9
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 2.4e-48 196.4 267 40.1
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 6.9e-48 194.9 124 68.5
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 7.7e-47 191.4 161 55.3
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 5.0e-46 188.7 169 53.8
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 1.6e-44 183.7 103 80.6
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 1.0e-43 181.0 103 79.6
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 1.1e-40 171.0 105 71.4
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 7.7e-39 164.9 143 55.2
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 3.8e-38 162.5 116 65.5
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 6.5e-38 161.8 158 52.5
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 4.2e-37 159.1 163 52.1
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 2.8e-25 119.8 76 72.4
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 1.3e-22 110.9 82 61.0
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 7.2e-21 105.1 133 43.6
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 4.7e-20 102.4 82 54.9
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 6.1e-20 102.1 131 41.2
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 8.0e-20 101.7 117 45.3
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 2.2e-17 93.6 130 40.8
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 1.4e-16 90.9 136 39.0
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 4.7e-12 75.9 41 82.9
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 3.0e-11 73.2 68 50.0


User provided reference genes

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