Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 1.4e-212 742.7 362 100.0
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 2.5e-174 615.5 355 83.9
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 6.8e-143 511.1 356 68.8
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 3.4e-142 508.8 352 67.3
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 5.7e-142 508.1 366 65.8
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 3.7e-141 505.4 355 67.3
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 8.3e-141 504.2 352 67.0
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.2e-139 500.4 354 66.7
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 1.3e-138 496.9 354 66.4
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 1.7e-138 496.5 352 67.0
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 2.9e-138 495.7 354 65.8
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 3.2e-137 492.3 352 64.8
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 4.2e-137 491.9 355 64.2
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 4.2e-137 491.9 353 63.7
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.8e-135 486.5 355 63.9
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 8.8e-135 484.2 351 64.1
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 2.6e-134 482.6 352 63.6
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 9.8e-134 480.7 352 64.8
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 9.2e-132 474.2 355 63.9
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 1.2e-131 473.8 352 60.5
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 1.6e-131 473.4 355 61.7
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 2.0e-131 473.0 351 63.2
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 4.5e-131 471.9 352 62.2
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 7.8e-131 471.1 353 63.7
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 1.0e-130 470.7 354 64.4
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 1.7e-130 469.9 352 61.1
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 1.1e-129 467.2 353 61.2
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 1.9e-129 466.5 355 62.8
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 3.3e-129 465.7 352 60.5
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 5.6e-129 464.9 352 62.2
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 5.6e-129 464.9 353 61.2
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.2e-128 463.8 352 62.5
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 1.6e-128 463.4 385 58.4
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 3.6e-128 462.2 350 62.6
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 3.6e-128 462.2 351 59.3
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 1.8e-127 459.9 351 62.1
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 2.3e-127 459.5 416 54.3
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 4.0e-127 458.8 355 60.8
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 8.9e-127 457.6 320 65.6
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 1.2e-126 457.2 352 61.6
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 1.5e-126 456.8 351 61.0
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 2.0e-126 456.4 416 54.3
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 2.6e-126 456.1 352 61.4
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 7.5e-126 454.5 331 65.0
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 7.5e-126 454.5 351 60.7
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 2.9e-125 452.6 353 60.3
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.4e-124 450.3 357 59.7
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 4.6e-123 445.3 351 60.1
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 2.3e-122 443.0 353 59.2
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 5.0e-122 441.8 360 58.3
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 8.6e-122 441.0 353 58.9
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 1.5e-121 440.3 451 50.3
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 4.3e-121 438.7 356 59.3
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 8.0e-120 434.5 365 57.3
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 1.8e-119 433.3 356 57.9
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 9.2e-116 421.0 357 58.5
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 2.8e-112 409.5 352 55.7
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 2.8e-112 409.5 352 55.7
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.4e-111 407.1 352 55.1
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 4.4e-110 402.1 351 58.1
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 4.4e-110 402.1 355 57.5
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 2.3e-106 389.8 499 44.5
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 1.1e-100 370.9 460 44.6
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 1.3e-98 364.0 287 61.0
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 1.1e-89 334.3 355 45.6
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 2.9e-85 319.7 289 55.4
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 3.1e-79 299.7 359 41.2
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 5.5e-76 288.9 190 68.4
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 3.0e-74 283.1 346 47.1
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 2.8e-72 276.6 198 63.6
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 2.4e-71 273.5 228 57.5
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 1.4e-63 247.7 216 56.5
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 4.1e-63 246.1 155 71.0
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 4.3e-57 226.1 233 48.5
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 2.8e-56 223.4 145 64.1
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 1.4e-52 211.1 250 47.2
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 7.9e-51 205.3 358 32.7
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 3.1e-47 193.4 144 61.1
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 1.8e-42 177.6 161 55.9
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 1.7e-40 171.0 424 28.5
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 3.8e-37 159.8 394 31.7
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 1.4e-34 151.4 117 65.0
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 2.2e-32 144.1 124 58.1
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.9e-29 133.7 109 56.0
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.3e-26 124.0 100 63.0
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 8.8e-26 122.1 70 70.0
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.5e-25 121.3 104 56.7
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 2.8e-24 117.1 70 68.6
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 2.8e-24 117.1 70 68.6
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.8e-24 117.1 111 56.8
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 8.3e-24 115.5 101 48.5
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 1.4e-23 114.8 69 71.0
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 1.6e-22 111.3 293 29.0
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 5.5e-20 102.8 76 68.4
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.1e-19 100.9 102 49.0
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 3.4e-17 93.6 60 70.0
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.8e-16 90.5 63 68.3
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.7e-16 90.1 63 66.7
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.4e-15 88.2 63 65.1
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 1.4e-15 88.2 106 46.2
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.1e-15 86.7 63 65.1
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 4.1e-15 86.7 52 67.3
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.5e-14 83.2 49 63.3
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.9e-12 77.8 53 67.9
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 7.8e-06 55.8 93 36.6


User provided reference genes

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