Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 8.8e-93 343.6 171 100.0
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 4.3e-55 218.4 174 66.1
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 2.1e-54 216.1 179 62.0
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 3.6e-54 215.3 177 66.1
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 8.1e-54 214.2 180 62.8
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 1.1e-53 213.8 174 64.4
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 1.1e-53 213.8 175 64.0
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 1.8e-53 213.0 186 62.4
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 2.3e-53 212.6 177 63.8
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 2.3e-53 212.6 175 65.1
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 3.1e-53 212.2 177 64.4
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 3.1e-53 212.2 175 65.1
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 3.1e-53 212.2 176 64.2
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 4.0e-53 211.8 136 75.7
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 4.0e-53 211.8 136 75.7
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 4.0e-53 211.8 175 64.6
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 4.0e-53 211.8 175 64.6
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 4.0e-53 211.8 175 64.6
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 4.0e-53 211.8 176 65.3
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 6.8e-53 211.1 178 61.8
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 6.8e-53 211.1 174 64.9
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 6.8e-53 211.1 174 64.9
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 6.8e-53 211.1 180 61.7
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 6.8e-53 211.1 178 65.7
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 8.9e-53 210.7 177 65.5
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 2.0e-52 209.5 174 63.8
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 2.6e-52 209.1 181 64.6
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 2.6e-52 209.1 171 63.7
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 2.6e-52 209.1 180 61.7
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 2.6e-52 209.1 180 63.9
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 4.4e-52 208.4 152 70.4
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 7.6e-52 207.6 119 81.5
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 7.6e-52 207.6 147 71.4
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 7.6e-52 207.6 142 73.2
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 9.9e-52 207.2 177 61.6
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 9.9e-52 207.2 177 61.6
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 9.9e-52 207.2 179 62.6
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 9.9e-52 207.2 177 61.6
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 9.9e-52 207.2 177 63.3
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 1.3e-51 206.8 173 62.4
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 2.2e-51 206.1 180 64.4
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 2.9e-51 205.7 177 61.0
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 4.9e-51 204.9 177 62.7
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 4.9e-51 204.9 129 76.7
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 6.4e-51 204.5 133 72.9
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 6.4e-51 204.5 183 61.2
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 6.4e-51 204.5 139 69.1
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 8.3e-51 204.1 120 81.7
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 8.3e-51 204.1 150 70.0
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 8.3e-51 204.1 119 80.7
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 1.1e-50 203.8 179 62.6
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 1.1e-50 203.8 182 62.1
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 1.1e-50 203.8 138 73.9
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 1.4e-50 203.4 150 69.3
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 1.4e-50 203.4 173 61.3
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 1.9e-50 203.0 129 75.2
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 2.4e-50 202.6 134 74.6
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 2.4e-50 202.6 173 63.6
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 2.4e-50 202.6 175 61.1
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 3.2e-50 202.2 183 62.8
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 4.1e-50 201.8 127 72.4
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 4.1e-50 201.8 148 70.3
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 4.1e-50 201.8 142 71.1
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 5.4e-50 201.4 125 76.0
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 5.4e-50 201.4 179 62.6
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 5.4e-50 201.4 178 60.1
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 7.1e-50 201.1 141 68.8
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 7.1e-50 201.1 138 72.5
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 1.2e-49 200.3 175 60.6
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 1.2e-49 200.3 139 70.5
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 1.6e-49 199.9 132 71.2
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 2.1e-49 199.5 163 65.6
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 2.7e-49 199.1 176 61.9
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 2.7e-49 199.1 175 62.3
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 3.5e-49 198.7 122 77.0
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 3.5e-49 198.7 121 78.5
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 4.6e-49 198.4 129 75.2
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 4.6e-49 198.4 129 75.2
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 6.0e-49 198.0 120 78.3
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 1.0e-48 197.2 137 70.1
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 1.7e-48 196.4 179 58.7
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 1.7e-48 196.4 148 64.9
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 2.3e-48 196.1 175 59.4
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 3.0e-48 195.7 132 70.5
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 8.6e-48 194.1 128 71.9
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 4.3e-47 191.8 155 63.9
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 5.6e-47 191.4 122 72.1
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 9.6e-47 190.7 129 72.1
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 2.1e-46 189.5 185 57.3
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 3.6e-46 188.7 128 71.1
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 8.1e-46 187.6 127 71.7
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 1.1e-45 187.2 189 57.1
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 3.1e-45 185.7 157 64.3
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 3.1e-45 185.7 120 73.3
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 2.6e-44 182.6 197 54.3
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 2.2e-43 179.5 120 70.0
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 8.4e-43 177.6 131 64.9
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.2e-41 173.7 125 66.4
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 7.8e-41 171.0 119 66.4
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 2.3e-40 169.5 179 51.4
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 3.6e-38 162.2 178 52.8
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 9.0e-37 157.5 183 50.8
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 1.9e-34 149.8 114 74.6
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.6e-33 146.7 103 69.9
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.6e-33 146.7 103 69.9
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 1.2e-25 120.6 102 63.7
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 3.9e-24 115.5 121 58.7
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 7.4e-23 111.3 58 84.5
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 3.1e-21 105.9 174 42.5
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 3.4e-20 102.4 82 64.6
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 2.9e-19 99.4 67 68.7
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 4.3e-15 85.5 65 70.8
Cre03.g144184 Chlamydomonas reinhardtii HOM05D007229 ORTHO05D009131 1.9e-07 60.1 55 54.5
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 7.4e-07 58.2 97 45.4
unitig_90.g27575 Utricularia gibba HOM05D007229 ORTHO05D009131 2.8e-06 56.2 57 57.9


User provided reference genes

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