Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0814400 Oryza sativa ssp. japonica HOM05D033995 ORTHO05D003325 2.6e-208 728.8 446 100.0
Zm00001eb149900 Zea mays HOM05D033995 ORTHO05D003325 2.5e-57 227.3 373 49.1
Zm00001eb369110 Zea mays HOM05D033995 ORTHO05D003325 9.3e-28 129.0 309 43.7
CSS0031426 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D000289 9.6e-09 65.9 99 48.5
Actinidia07050 Actinidia chinensis HOM05D004206 ORTHO05D003325 1.8e-07 61.6 130 37.7
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 5.3e-07 60.1 103 42.7
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 6.9e-07 59.7 103 42.7
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 9.0e-07 59.3 73 52.1
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 2.0e-06 58.2 83 44.6
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 2.6e-06 57.8 61 54.1
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 2.6e-06 57.8 103 41.7
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 2.6e-06 57.8 74 47.3
Psat6g067720 Pisum sativum HOM05D004206 ORTHO05D003325 3.4e-06 57.4 153 37.3
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 4.5e-06 57.0 103 41.7
MBI05_g10357_MAGBIO Magnolia biondii HOM05D004206 ORTHO05D003325 5.9e-06 56.6 78 46.2
Manes.08G076700 Manihot esculenta HOM05D004206 ORTHO05D003325 7.6e-06 56.2 58 60.3
SalBow3G3817 Salvia bowleyana HOM05D004206 ORTHO05D003325 7.6e-06 56.2 88 45.5
Manes.09G086700 Manihot esculenta HOM05D004206 ORTHO05D003325 1.0e-05 55.8 128 39.8


User provided reference genes

Program Settings