Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 1.2e-230 802.7 402 100.0
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 1.4e-186 656.4 396 82.6
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 1.4e-157 560.1 347 76.4
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 2.0e-156 556.2 336 78.6
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 4.5e-156 555.1 352 75.9
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 5.9e-156 554.7 353 75.9
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 1.3e-155 553.5 359 73.8
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 2.2e-155 552.7 397 70.8
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 2.2e-155 552.7 359 73.5
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 3.8e-155 552.0 342 77.2
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 6.5e-155 551.2 359 73.3
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.1e-154 550.4 342 76.6
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 4.2e-154 548.5 397 69.0
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 5.5e-154 548.1 341 75.7
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 7.2e-154 547.7 333 77.8
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 9.5e-154 547.4 400 68.5
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 9.5e-154 547.4 349 75.9
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 1.2e-153 547.0 390 70.5
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 1.2e-153 547.0 388 70.1
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 2.1e-153 546.2 415 65.8
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 2.1e-153 546.2 337 76.6
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 2.7e-153 545.8 390 69.2
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 4.7e-153 545.0 341 76.0
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 6.1e-153 544.7 347 75.5
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.8e-152 543.1 399 67.7
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 1.8e-152 543.1 415 65.1
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 3.0e-152 542.3 391 68.5
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 3.0e-152 542.3 386 68.4
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 3.0e-152 542.3 355 75.2
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 8.8e-152 540.8 330 78.2
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 2.0e-151 539.7 403 67.2
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 3.4e-151 538.9 396 68.2
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 4.4e-151 538.5 337 77.2
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 4.4e-151 538.5 351 74.1
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 5.7e-151 538.1 338 75.7
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 5.7e-151 538.1 386 67.9
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 5.7e-151 538.1 342 75.1
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 7.5e-151 537.7 348 73.6
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 7.5e-151 537.7 389 69.2
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 1.3e-150 537.0 335 76.4
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 1.3e-150 537.0 401 67.3
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 1.3e-150 537.0 381 69.3
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.7e-150 536.6 385 69.1
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 2.8e-150 535.8 332 77.4
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 2.8e-150 535.8 332 77.4
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 2.8e-150 535.8 337 76.0
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.7e-150 535.4 332 77.4
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 4.9e-150 535.0 338 75.1
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 6.3e-150 534.6 361 70.1
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 8.3e-150 534.3 332 77.4
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 1.1e-149 533.9 365 71.2
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 1.1e-149 533.9 359 72.7
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 1.8e-149 533.1 344 73.8
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.4e-149 532.7 361 70.1
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 2.4e-149 532.7 333 75.1
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 2.4e-149 532.7 337 75.7
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 3.1e-149 532.3 385 68.1
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 3.1e-149 532.3 359 71.9
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 4.1e-149 531.9 386 68.7
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 5.4e-149 531.6 336 75.6
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 7.0e-149 531.2 335 75.2
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 7.0e-149 531.2 335 75.2
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 7.0e-149 531.2 338 74.3
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 9.2e-149 530.8 399 66.4
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 1.6e-148 530.0 357 72.0
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 2.0e-148 529.6 391 67.3
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 2.0e-148 529.6 363 70.0
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 2.7e-148 529.3 335 74.9
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 2.7e-148 529.3 335 74.9
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 2.7e-148 529.3 335 74.6
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 2.7e-148 529.3 363 70.8
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 5.9e-148 528.1 337 73.9
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 5.9e-148 528.1 364 69.5
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 5.9e-148 528.1 384 68.0
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 7.7e-148 527.7 382 68.3
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 1.0e-147 527.3 325 74.8
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 1.0e-147 527.3 378 69.6
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.3e-147 526.9 406 64.8
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 1.7e-147 526.6 335 74.3
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 2.3e-147 526.2 338 74.6
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 2.9e-147 525.8 362 70.7
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 2.9e-147 525.8 338 72.5
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 8.6e-147 524.2 383 68.1
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 1.5e-146 523.5 330 76.1
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 4.7e-145 518.5 359 70.8
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.0e-144 517.3 323 76.2
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 1.0e-144 517.3 396 65.9
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 1.5e-143 513.5 338 73.4
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 2.6e-143 512.7 383 66.1
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 3.4e-143 512.3 382 66.2
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 5.7e-143 511.5 315 75.6
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 4.9e-142 508.4 339 72.9
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.2e-140 503.8 308 77.6
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.6e-138 495.0 351 69.8
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 2.1e-137 493.0 299 78.6
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 2.8e-137 492.7 364 66.8
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 9.8e-135 484.2 392 63.8
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 1.3e-134 483.8 388 64.9
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.7e-134 483.4 321 72.6
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 3.7e-134 482.3 320 73.8
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 2.4e-133 479.6 386 63.5
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 9.2e-133 477.6 383 64.8
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 3.0e-131 472.6 340 65.3
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.2e-127 460.7 334 65.3
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 1.5e-127 460.3 277 78.0
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 1.6e-124 450.3 332 65.1
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 2.1e-116 423.3 329 62.6
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.1e-112 411.0 275 74.5
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 1.7e-110 403.7 305 66.2
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 4.2e-109 399.1 335 62.1
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 4.0e-96 355.9 271 67.2
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.6e-84 317.4 289 56.1
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 5.1e-83 312.4 341 50.1
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 1.6e-81 307.4 307 50.5
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 1.2e-79 301.2 301 55.5
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.6e-73 280.8 225 63.6
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 5.3e-64 249.2 170 74.1
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 9.7e-50 201.8 128 70.3
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.4e-48 198.0 172 57.6
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 5.4e-40 169.5 114 73.7
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 9.8e-34 148.7 102 68.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.0e-26 124.4 123 52.0
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 7.8e-23 112.5 68 75.0
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 6.2e-20 102.8 155 40.0
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.1e-19 102.1 106 50.0
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 7.0e-16 89.4 74 58.1
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 1.5e-13 81.6 48 70.8


User provided reference genes

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