Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0735450 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 1.1e-107 393.3 193 100.0
Zm00001eb353630 Zea mays HOM05D010444 ORTHO05D010602 1.2e-29 134.0 181 48.6
Zm00001eb323950 Zea mays HOM05D010444 ORTHO05D010602 7.8e-29 131.3 181 47.5
Os06g0343500 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 8.9e-25 117.9 137 51.1
Zm00001eb117540 Zea mays HOM05D010444 ORTHO05D010602 2.0e-21 106.7 120 53.3
Os07g0503200 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 4.4e-16 89.0 185 38.4
SGA_v2.0_scaffold181G39744 Striga asiatica HOM05D010444 ORTHO05D010602 3.2e-14 82.8 138 42.8
MBI15_g27554_MAGBIO Magnolia biondii HOM05D010444 ORTHO05D010602 4.1e-14 82.4 112 45.5
Os09g0518266 Oryza sativa ssp. japonica HOM05D011891 ORTHO05D014146 1.0e-12 77.8 118 44.1
AT4G34139 Arabidopsis thaliana HOM05D014563 ORTHO05D010602 6.2e-10 68.6 101 42.6
Os04g0523650 Oryza sativa ssp. japonica HOM05D031261 ORTHO05D010602 2.0e-08 63.5 193 31.1
SGA_v2.0_scaffold90G27610 Striga asiatica HOM05D010444 ORTHO05D010602 2.6e-08 63.2 115 41.7
CiPaw.04G101700 Carya illinoinensis HOM05D011587 ORTHO05D010602 1.7e-07 60.5 99 41.4
A01p33230 Brassica napus HOM05D010444 ORTHO05D010602 6.4e-07 58.5 86 44.2
SGA_v2.0_scaffold12G06190 Striga asiatica HOM05D011891 ORTHO05D014146 6.4e-07 58.5 102 38.2
SGA_v2.0_scaffold73G24417 Striga asiatica HOM05D010444 ORTHO05D010602 1.1e-06 57.8 111 39.6
SGA_v2.0_scaffold96G28940 Striga asiatica HOM05D015573 ORTHO05D017203 1.1e-06 57.8 119 34.5
SGA_v2.0_scaffold413G51163 Striga asiatica HOM05D010444 ORTHO05D051413 1.9e-06 57.0 90 43.3
Migut.J01735 Erythranthe guttata HOM05D015573 ORTHO05D010602 2.4e-06 56.6 117 35.9
CiPaw.15G057400 Carya illinoinensis HOM05D014563 ORTHO05D010602 5.4e-06 55.5 102 35.3
Os03g0693650 Oryza sativa ssp. japonica HOM05D011891 ORTHO05D014146 7.1e-06 55.1 102 40.2
CiPaw.05G034500 Carya illinoinensis HOM05D011587 ORTHO05D010602 9.2e-06 54.7 101 39.6
SGA_v2.0_scaffold393G50704 Striga asiatica HOM05D010444 ORTHO05D010602 9.2e-06 54.7 93 39.8


User provided reference genes

Program Settings