Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0708300 Oryza sativa ssp. japonica HOM05D005314 ORTHO05D006522 1.1e-84 316.6 160 100.0
TWI34G0632 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 2.3e-58 229.2 144 73.6
TWI32G0330 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 6.6e-58 227.6 144 73.6
Potri.018G060500 Populus trichocarpa HOM05D005314 ORTHO05D006522 3.3e-57 225.3 159 67.3
Prupe.1G409300 Prunus persica HOM05D005314 ORTHO05D006522 9.5e-57 223.8 158 68.4
TAR369G0158 Trochodendron aralioides HOM05D005314 ORTHO05D006522 1.2e-56 223.4 144 75.0
TAR636G1106 Trochodendron aralioides HOM05D005314 ORTHO05D006522 1.2e-56 223.4 144 75.0
CANSAT25G2280 Cannabis sativa HOM05D005314 ORTHO05D006522 2.8e-56 222.2 144 73.6
RcHm_v2.0_Chr6g0311221 Rosa chinensis HOM05D005314 ORTHO05D006522 2.8e-56 222.2 158 67.7
Atru.chr7.1939 Acer truncatum HOM05D005314 ORTHO05D006522 4.7e-56 221.5 144 72.9
PSO210G6321 Papaver somniferum HOM05D005314 ORTHO05D006522 4.7e-56 221.5 144 72.9
PSO210G6435 Papaver somniferum HOM05D005314 ORTHO05D006522 4.7e-56 221.5 144 72.9
MD15G1056700 Malus domestica HOM05D005314 ORTHO05D006522 1.1e-55 220.3 158 66.5
FvH4_2g31600 Fragaria vesca HOM05D005314 ORTHO05D006522 1.4e-55 219.9 158 67.1
CiPaw.15G037000 Carya illinoinensis HOM05D005314 ORTHO05D006522 1.8e-55 219.5 158 67.7
MD08G1064900 Malus domestica HOM05D005314 ORTHO05D006522 1.8e-55 219.5 158 66.5
PGR044G2019 Punica granatum HOM05D005314 ORTHO05D006522 1.8e-55 219.5 144 73.6
GSVIVG01035376001 Vitis vinifera HOM05D005314 ORTHO05D006522 2.3e-55 219.2 158 67.7
CSS0005464 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 4.0e-55 218.4 144 72.9
CDE06G1634 Ceratophyllum demersum HOM05D005314 ORTHO05D006522 4.0e-55 218.4 158 65.2
Actinidia30326 Actinidia chinensis HOM05D005314 ORTHO05D006522 5.2e-55 218.0 144 70.8
AUR62009122 Chenopodium quinoa HOM05D005314 ORTHO05D006522 5.2e-55 218.0 144 72.9
Duzib150G1607 Durio zibethinus HOM05D005314 ORTHO05D006522 5.2e-55 218.0 144 70.8
Hund19438 Selenicereus undatus HOM05D005314 ORTHO05D006522 6.8e-55 217.6 144 71.5
Thecc.09G057100 Theobroma cacao HOM05D005314 ORTHO05D006522 6.8e-55 217.6 144 70.1
Aqoxy7G04033 Aquilegia oxysepala HOM05D000411 ORTHO05D006522 1.2e-54 216.9 158 66.5
Cfa017974 Carpinus fangiana HOM05D005314 ORTHO05D006522 1.2e-54 216.9 144 72.2
COL.COLO4_21084 Corchorus olitorius HOM05D005314 ORTHO05D006522 1.2e-54 216.9 144 71.5
Haze_18156 Corylus avellana HOM05D005314 ORTHO05D006522 1.2e-54 216.9 158 66.5
Manes.03G050000 Manihot esculenta HOM05D005314 ORTHO05D006522 1.2e-54 216.9 144 71.5
Potri.006G226000 Populus trichocarpa HOM05D005314 ORTHO05D006522 1.2e-54 216.9 159 67.3
ClCG05G017990 Citrullus lanatus HOM05D005314 ORTHO05D006522 2.0e-54 216.1 144 70.8
Peaxi162Scf01088g00005 Petunia axillaris HOM05D005314 ORTHO05D006522 2.0e-54 216.1 144 70.8
Sed0001440 Sechium edule HOM05D005314 ORTHO05D006522 2.0e-54 216.1 144 72.2
BraA10t44644Z Brassica rapa HOM05D005314 ORTHO05D006522 2.6e-54 215.7 156 69.2
QL02p000736 Quercus lobata HOM05D005314 ORTHO05D006522 3.4e-54 215.3 144 70.8
Migut.A00114 Erythranthe guttata HOM05D005314 ORTHO05D006522 4.4e-54 214.9 144 71.5
SGA_v2.0_scaffold20G09204 Striga asiatica HOM05D005314 ORTHO05D006522 4.4e-54 214.9 144 70.8
MSTRG.25961 Avicennia marina HOM05D005314 ORTHO05D006522 5.8e-54 214.5 158 65.2
CiPaw.16G027100 Carya illinoinensis HOM05D005314 ORTHO05D006522 5.8e-54 214.5 144 70.1
Ca_13152_v3 Cicer arietinum L. HOM05D005314 ORTHO05D006522 5.8e-54 214.5 144 70.1
MELO3C016882.2 Cucumis melo HOM05D005314 ORTHO05D006522 5.8e-54 214.5 144 70.8
CsaV3_4G035770 Cucumis sativus L. HOM05D005314 ORTHO05D006522 5.8e-54 214.5 144 70.8
Rhsim11G0042200 Rhododendron simsii HOM05D005314 ORTHO05D006522 5.8e-54 214.5 150 69.3
Aa31LG3G15270 Aethionema arabicum HOM05D005314 ORTHO05D006522 9.9e-54 213.8 146 71.9
Solyc06g036780.3 Solanum lycopersicum HOM05D005314 ORTHO05D006522 9.9e-54 213.8 144 70.1
Sopen06g012940 Solanum pennellii HOM05D005314 ORTHO05D006522 9.9e-54 213.8 144 70.1
Cc08_g10890 Coffea canephora HOM05D005314 ORTHO05D006522 1.3e-53 213.4 158 63.9
SalBow4G3021 Salvia bowleyana HOM05D005314 ORTHO05D006522 1.7e-53 213.0 144 70.8
CAN.G130.11 Capsicum annuum HOM05D005314 ORTHO05D006522 2.2e-53 212.6 144 70.1
Oeu003996.1 Olea europaea HOM05D005314 ORTHO05D006522 2.2e-53 212.6 147 70.1
Eucgr.C03058 Eucalyptus grandis HOM05D005314 ORTHO05D006522 2.9e-53 212.2 144 70.8
Nn8g38796 Nelumbo nucifera HOM05D005314 ORTHO05D006522 2.9e-53 212.2 143 70.6
Phvul.009G078900 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 2.9e-53 212.2 144 70.1
THA.LOC104811236 Tarenaya hassleriana HOM05D005314 ORTHO05D006522 2.9e-53 212.2 144 70.8
ATR0789G137 Amborella trichopoda HOM05D005314 ORTHO05D006522 4.9e-53 211.5 144 68.8
BcaNung02637 Brassica carinata HOM05D005314 ORTHO05D006522 4.9e-53 211.5 144 72.2
ECA233G4949 Erigeron canadensis HOM05D005314 ORTHO05D006522 4.9e-53 211.5 144 70.8
Glyma.06G053100 Glycine max HOM05D005314 ORTHO05D006522 4.9e-53 211.5 144 69.4
MBI01_g21122_MAGBIO Magnolia biondii HOM05D005314 ORTHO05D006522 4.9e-53 211.5 135 76.3
A10p25800 Brassica napus HOM05D005314 ORTHO05D006522 8.3e-53 210.7 144 72.2
C09p64870 Brassica napus HOM05D005314 ORTHO05D006522 8.3e-53 210.7 144 72.2
BolC9t59318H Brassica oleracea HOM05D005314 ORTHO05D006522 8.3e-53 210.7 144 72.2
Dinv22878 Davidia involucrata HOM05D005314 ORTHO05D006522 8.3e-53 210.7 144 68.8
Gohir.D07G021900 Gossypium hirsutum HOM05D005314 ORTHO05D006522 8.3e-53 210.7 144 68.8
Gorai.001G022500 Gossypium raimondii HOM05D005314 ORTHO05D006522 8.3e-53 210.7 144 68.8
Lalb_Chr22g0356141 Lupinus albus HOM05D005314 ORTHO05D006522 8.3e-53 210.7 158 65.2
EL10Ac2g03829 Beta vulgaris HOM05D005314 ORTHO05D006522 1.1e-52 210.3 144 68.8
Gohir.A07G021950 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.1e-52 210.3 144 68.1
Lalb_Chr11g0063171 Lupinus albus HOM05D005314 ORTHO05D006522 1.4e-52 209.9 144 70.1
AL6G22740 Arabidopsis lyrata HOM05D005314 ORTHO05D006522 1.9e-52 209.5 144 71.5
Carub.0006s1050 Capsella rubella HOM05D005314 ORTHO05D006522 1.9e-52 209.5 144 71.5
Gohir.A13G187700 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.9e-52 209.5 144 68.1
Gorai.013G220600 Gossypium raimondii HOM05D005314 ORTHO05D006522 1.9e-52 209.5 144 68.1
Lsat_1_v5_gn_6_14601 Lactuca sativa HOM05D005314 ORTHO05D006522 2.4e-52 209.1 144 68.8
Lj1g0000731 Lotus japonicus HOM05D005314 ORTHO05D006522 2.4e-52 209.1 144 65.3
HPP92_007653 Vanilla planifolia HOM05D005314 ORTHO05D006522 2.4e-52 209.1 158 62.7
Gohir.D13G194600 Gossypium hirsutum HOM05D005314 ORTHO05D006522 4.1e-52 208.4 144 67.4
Dinv28005 Davidia involucrata HOM05D005314 ORTHO05D006522 5.4e-52 208.0 144 68.1
Sp6g31630 Schrenkiella parvula HOM05D005314 ORTHO05D006522 7.1e-52 207.6 144 70.8
TPR.G13039 Trifolium pratense HOM05D005314 ORTHO05D006522 7.1e-52 207.6 145 69.0
AT5G11960 Arabidopsis thaliana HOM05D005314 ORTHO05D006522 9.2e-52 207.2 144 70.8
Lalb_Chr14g0366381 Lupinus albus HOM05D005314 ORTHO05D006522 9.2e-52 207.2 144 68.8
Medtr1g015820 Medicago truncatula HOM05D005314 ORTHO05D006522 1.2e-51 206.8 145 69.7
Glyma.14G097400 Glycine max HOM05D005314 ORTHO05D006522 2.1e-51 206.1 150 68.0
Psat6g021480 Pisum sativum HOM05D005314 ORTHO05D006522 3.5e-51 205.3 145 69.7
BcaC03g13403 Brassica carinata HOM05D005314 ORTHO05D006522 4.6e-51 204.9 144 70.8
A02p01290 Brassica napus HOM05D005314 ORTHO05D006522 4.6e-51 204.9 144 70.8
C02p05500 Brassica napus HOM05D005314 ORTHO05D006522 4.6e-51 204.9 144 70.8
BolC2t06496H Brassica oleracea HOM05D005314 ORTHO05D006522 4.6e-51 204.9 144 70.8
BraA02t05108Z Brassica rapa HOM05D005314 ORTHO05D006522 4.6e-51 204.9 144 70.8
Phvul.001G037500 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 6.0e-51 204.5 144 68.1
arahy.Tifrunner.gnm1.ann1.VQ1HGR Arachis hypogaea HOM05D005314 ORTHO05D006522 7.8e-51 204.1 144 68.1
Thhalv10014010m.g Eutrema salsugineum HOM05D005314 ORTHO05D006522 7.8e-51 204.1 144 70.1
Nitab4.5_0000972g0030 Nicotiana tabacum HOM05D005314 ORTHO05D006522 1.0e-50 203.8 161 64.0
Ciclev10008891m.g Citrus clementina HOM05D005314 ORTHO05D006522 2.3e-50 202.6 136 69.1
HanXRQChr08g0226511 Helianthus annuus HOM05D005314 ORTHO05D006522 3.9e-50 201.8 144 67.4
Cpa.g.sc7.160 Carica papaya HOM05D005314 ORTHO05D006522 1.1e-49 200.3 152 64.5
Sabra18G0054400 Salix brachista HOM05D005314 ORTHO05D006522 2.5e-49 199.1 196 53.6
Hma1.2p1_0544F.1_g175630 Hydrangea macrophylla HOM05D005314 ORTHO05D006522 2.1e-48 196.1 158 60.8
FAN27G1630 Fragaria x ananassa HOM05D005314 ORTHO05D006522 2.8e-48 195.7 158 61.4
VMungo0647G2045 Vigna mungo HOM05D005314 ORTHO05D006522 1.1e-47 193.7 157 61.8
VMungo1309G2963 Vigna mungo HOM05D005314 ORTHO05D006522 1.4e-44 183.3 144 62.5
unitig_88.g27677 Utricularia gibba HOM05D005314 ORTHO05D006522 1.7e-42 176.4 162 56.2
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 1.1e-41 173.7 145 57.9
Mapoly0049s0128 Marchantia polymorpha HOM05D005314 ORTHO05D006522 1.9e-41 172.9 144 57.6
AUR62039137 Chenopodium quinoa HOM05D005314 ORTHO05D006522 1.2e-40 170.2 147 60.5
FAN24G2134 Fragaria x ananassa HOM05D005314 ORTHO05D006522 5.8e-38 161.4 121 63.6
FAN15G2750 Fragaria x ananassa HOM05D005314 ORTHO05D006522 7.6e-38 161.0 126 61.9
Sabra06G0174700 Salix brachista HOM05D005314 ORTHO05D006522 7.6e-38 161.0 109 69.7
Sc23g0005690 Simmondsia chinensis HOM05D005314 ORTHO05D006522 4.2e-36 155.2 144 54.2
Glyma.04G052700 Glycine max HOM05D005314 ORTHO05D006522 1.2e-35 153.7 107 68.2
Glyma.17G227100 Glycine max HOM05D005314 ORTHO05D006522 6.0e-35 151.4 144 54.2
arahy.Tifrunner.gnm1.ann1.UTD444 Arachis hypogaea HOM05D005314 ORTHO05D006522 5.6e-33 144.8 144 52.1
arahy.Tifrunner.gnm1.ann1.GAY7D4 Arachis hypogaea HOM05D005314 ORTHO05D006522 3.6e-32 142.1 135 54.1
MD11G1243300 Malus domestica HOM05D005314 ORTHO05D006522 1.3e-29 133.7 105 61.0
Lj8A530G14 Lonicera japonica HOM05D005314 ORTHO05D006522 1.0e-26 124.0 91 63.7
Cre10.g419700 Chlamydomonas reinhardtii HOM05D005314 ORTHO05D006522 1.3e-26 123.6 125 44.8
arahy.Tifrunner.gnm1.ann1.6D5JL1 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.8e-26 123.2 144 45.8
Pp3c7_50 Physcomitrium patens HOM05D005314 ORTHO05D006522 3.9e-26 122.1 114 56.1
BcaB03g16563 Brassica carinata HOM05D005314 ORTHO05D006522 8.7e-26 120.9 129 51.9
Oeu040341.1 Olea europaea HOM05D005314 ORTHO05D006522 2.8e-24 115.9 74 78.4
PRCOL_00001271 Prasinoderma coloniale HOM05D005314 ORTHO05D006522 9.0e-23 110.9 131 47.3
vmacro00123 Vaccinium macrocarpon HOM05D005314 ORTHO05D006522 1.2e-22 110.5 80 61.2
MCO12G408 Micromonas commoda HOM05D005314 ORTHO05D006522 9.9e-22 107.5 120 44.2
Hund03325 Selenicereus undatus HOM05D005314 ORTHO05D006522 1.8e-18 96.7 72 58.3
SEGI_34785 Sequoiadendron giganteum HOM05D005314 ORTHO05D006522 6.7e-18 94.7 73 58.9
CBR_g50008 Chara braunii HOM05D005314 ORTHO05D006522 8.7e-18 94.4 78 57.7
Lj7A260G18 Lonicera japonica HOM05D005314 ORTHO05D006522 1.6e-16 90.1 90 48.9
Zm00001eb155260 Zea mays HOM05D005314 ORTHO05D006522 8.2e-16 87.8 62 72.6
RcHm_v2.0_Chr1g0383701 Rosa chinensis HOM05D005314 ORTHO05D006522 1.2e-14 84.0 137 37.2
Sed0024799 Sechium edule HOM05D005314 ORTHO05D006522 9.3e-12 74.3 62 56.5
Nitab4.5_0000268g0140 Nicotiana tabacum HOM05D005314 ORTHO05D006522 1.1e-09 67.4 38 78.9


User provided reference genes

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