Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0706266 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 4.5e-211 737.6 366 100.0
Zm00001eb161220 Zea mays HOM05D000312 ORTHO05D000221 2.6e-73 280.0 273 54.2
Os01g0596100 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 4.1e-71 272.7 274 53.6
Os02g0493100 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 1.2e-70 271.2 262 54.6
Os04g0208500 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 1.9e-68 263.8 261 50.6
Os02g0178200 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 5.4e-63 245.7 266 53.8
Os04g0208400 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 3.5e-62 243.0 263 50.2
Os04g0208600 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 3.8e-61 239.6 264 50.0
Os06g0492900 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D012886 5.2e-58 229.2 271 47.2
Os01g0595900 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 2.0e-57 227.3 277 46.9
Os01g0596300 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 2.6e-57 226.9 261 47.9
Zm00001eb357650 Zea mays HOM05D000312 ORTHO05D000221 2.5e-52 210.3 270 46.7
Os06g0492800 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D012886 1.4e-50 204.5 260 48.1
Os01g0596700 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 1.4e-42 177.9 277 41.5
Os01g0598400 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 2.6e-41 173.7 285 38.9
Os01g0578500 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 1.3e-40 171.4 262 37.0
Os01g0596600 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 1.1e-36 158.3 251 37.5
Zm00001eb161230 Zea mays HOM05D000312 ORTHO05D000221 1.7e-32 144.4 269 37.5
Os07g0285200 Oryza sativa ssp. japonica HOM05D010914 ORTHO05D012886 8.4e-16 89.0 278 30.6
Os07g0285700 Oryza sativa ssp. japonica HOM05D010914 ORTHO05D012886 1.4e-15 88.2 272 30.1
Os04g0409100 Oryza sativa ssp. japonica HOM05D010914 ORTHO05D012886 7.1e-15 85.9 269 27.1
Os07g0285450 Oryza sativa ssp. japonica HOM05D010914 ORTHO05D012886 4.6e-14 83.2 265 32.5
Os07g0287000 Oryza sativa ssp. japonica HOM05D010914 ORTHO05D012886 4.6e-14 83.2 266 29.3
Os01g0730100 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 5.6e-12 76.3 265 28.3
Os07g0285900 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D013480 2.1e-11 74.3 188 33.0
FAN12G3765 Fragaria x ananassa HOM05D000312 ORTHO05D000221 4.0e-10 70.1 128 32.8
Manes.14G093700 Manihot esculenta HOM05D000312 ORTHO05D000221 5.3e-10 69.7 166 30.7
TAR371G0769 Trochodendron aralioides HOM05D000312 ORTHO05D000221 1.5e-09 68.2 266 24.8
FAN22G1051 Fragaria x ananassa HOM05D000312 ORTHO05D000221 3.4e-09 67.0 128 32.8
CAN.G222.72 Capsicum annuum HOM05D000312 ORTHO05D000221 4.5e-09 66.6 179 29.1
Os12g0496700 Oryza sativa ssp. japonica HOM05D010914 ORTHO05D012886 4.5e-09 66.6 292 26.4
FvH4_4g28670 Fragaria vesca HOM05D000312 ORTHO05D000221 5.8e-09 66.2 128 32.0
TAR371G0679 Trochodendron aralioides HOM05D000312 ORTHO05D000221 7.6e-09 65.9 281 28.5
Dinv15564 Davidia involucrata HOM05D000312 ORTHO05D000221 1.3e-08 65.1 127 33.9
Sopen11g006360 Solanum pennellii HOM05D000312 ORTHO05D000221 1.3e-08 65.1 184 28.3
VMungo1215G0250 Vigna mungo HOM05D000312 ORTHO05D000221 2.2e-08 64.3 134 32.1
Glyma.02G127700 Glycine max HOM05D000312 ORTHO05D000221 2.9e-08 63.9 134 32.1
Nitab4.5_0006160g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 6.4e-08 62.8 150 30.0
Rhsim12G0067900 Rhododendron simsii HOM05D000312 ORTHO05D000221 6.4e-08 62.8 280 25.7
Os12g0558366 Oryza sativa ssp. japonica HOM05D010914 ORTHO05D012886 8.4e-08 62.4 226 29.2
TAR371G0228 Trochodendron aralioides HOM05D000312 ORTHO05D000221 8.4e-08 62.4 276 25.4
Ciclev10031638m.g Citrus clementina HOM05D000312 ORTHO05D000221 1.1e-07 62.0 130 33.1
PGSC0003DMG400013311 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.1e-07 62.0 178 27.5
Phvul.003G044500 Phaseolus vulgaris HOM05D000312 ORTHO05D000221 1.4e-07 61.6 134 30.6
PGSC0003DMG400020354 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.9e-07 61.2 182 25.3
PGSC0003DMG401013246 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.9e-07 61.2 166 25.9
TPR.G2707 Trifolium pratense HOM05D000312 ORTHO05D000221 1.9e-07 61.2 177 28.2
Oeu024131.1 Olea europaea HOM05D000312 ORTHO05D000221 2.4e-07 60.8 130 33.1
PGSC0003DMG403013246 Solanum tuberosum HOM05D000312 ORTHO05D000221 2.4e-07 60.8 171 28.1
Sopen04g005290 Solanum pennellii HOM05D000312 ORTHO05D000221 3.2e-07 60.5 280 23.9
Prupe.3G245000 Prunus persica HOM05D000312 ORTHO05D000221 4.2e-07 60.1 273 26.0
Sopen07g029150 Solanum pennellii HOM05D000312 ORTHO05D000221 4.2e-07 60.1 197 27.4
TAR371G0480 Trochodendron aralioides HOM05D000312 ORTHO05D000221 4.2e-07 60.1 282 24.5
Nitab4.5_0001438g0180 Nicotiana tabacum HOM05D000312 ORTHO05D000221 7.1e-07 59.3 162 29.0
Nitab4.5_0006160g0030 Nicotiana tabacum HOM05D000312 ORTHO05D000221 7.1e-07 59.3 148 25.7
Sc11g0002850 Simmondsia chinensis HOM05D000312 ORTHO05D000221 7.1e-07 59.3 274 25.2
PGSC0003DMG403013245 Solanum tuberosum HOM05D000312 ORTHO05D000221 7.1e-07 59.3 170 28.8
Peaxi162Scf00980g00131 Petunia axillaris HOM05D000312 ORTHO05D000221 9.3e-07 58.9 141 32.6
vmacro04489 Vaccinium macrocarpon HOM05D000312 ORTHO05D000221 9.3e-07 58.9 129 32.6
ECA234G1420 Erigeron canadensis HOM05D000312 ORTHO05D000221 1.2e-06 58.5 146 31.5
Peaxi162Scf00124g01514 Petunia axillaris HOM05D000312 ORTHO05D000221 1.2e-06 58.5 151 26.5
Peaxi162Scf00618g00746 Petunia axillaris HOM05D000312 ORTHO05D000221 1.6e-06 58.2 278 24.1
Zm00001eb305000 Zea mays HOM05D010914 ORTHO05D012886 1.6e-06 58.2 329 24.0
HanXRQChr16g0528041 Helianthus annuus HOM05D000312 ORTHO05D000221 2.1e-06 57.8 123 33.3
Nitab4.5_0007853g0030 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.1e-06 57.8 153 28.1
HanXRQChr16g0528051 Helianthus annuus HOM05D000312 ORTHO05D000221 2.7e-06 57.4 314 24.2
MBI19_g37315_MAGBIO Magnolia biondii HOM05D000570 ORTHO05D000221 3.5e-06 57.0 165 29.1
Rhsim12G0068100 Rhododendron simsii HOM05D000312 ORTHO05D000221 3.5e-06 57.0 270 24.8
TPR.G35231 Trifolium pratense HOM05D000312 ORTHO05D000221 3.5e-06 57.0 133 26.3
vmacro04488 Vaccinium macrocarpon HOM05D000312 ORTHO05D000221 3.5e-06 57.0 130 33.1


User provided reference genes

Program Settings