Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 1.1e-87 326.6 164 100.0
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 1.3e-77 293.1 164 89.6
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 1.8e-63 246.1 172 72.7
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 5.3e-63 244.6 159 71.1
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 5.3e-63 244.6 164 74.4
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 3.5e-62 241.9 159 74.2
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 4.5e-62 241.5 164 73.2
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 7.7e-62 240.7 165 72.7
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 1.3e-61 240.0 158 72.8
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 1.7e-61 239.6 154 73.4
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 1.7e-61 239.6 161 74.5
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 2.2e-61 239.2 163 74.8
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 3.8e-61 238.4 158 71.5
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 5.0e-61 238.0 152 73.7
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 5.0e-61 238.0 166 71.1
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 8.5e-61 237.3 164 70.1
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 1.5e-60 236.5 164 72.0
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 2.5e-60 235.7 152 75.7
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.5e-60 235.7 164 68.9
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 5.5e-60 234.6 162 69.1
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 7.2e-60 234.2 164 68.3
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 7.2e-60 234.2 154 72.1
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 9.4e-60 233.8 198 62.1
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 1.2e-59 233.4 167 65.3
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 1.2e-59 233.4 159 69.8
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 1.6e-59 233.0 167 70.1
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 1.6e-59 233.0 155 69.7
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 2.1e-59 232.6 165 69.1
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 3.6e-59 231.9 172 69.2
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 4.7e-59 231.5 166 68.1
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 4.7e-59 231.5 172 69.2
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 6.1e-59 231.1 154 70.1
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 8.0e-59 230.7 157 70.1
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 8.0e-59 230.7 164 67.7
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 1.0e-58 230.3 164 68.3
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.0e-58 230.3 164 68.3
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 1.4e-58 229.9 164 67.7
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 1.8e-58 229.6 155 69.0
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 2.3e-58 229.2 166 71.1
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 5.2e-58 228.0 167 67.7
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 5.2e-58 228.0 167 67.7
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 6.8e-58 227.6 165 66.7
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 8.8e-58 227.3 155 70.3
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 1.2e-57 226.9 162 69.8
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 3.4e-57 225.3 164 65.9
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 4.4e-57 224.9 156 68.6
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 4.4e-57 224.9 156 68.6
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 4.4e-57 224.9 152 69.7
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 7.5e-57 224.2 164 68.3
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 9.8e-57 223.8 155 69.0
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 1.3e-56 223.4 159 66.7
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 1.3e-56 223.4 159 66.7
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 1.3e-56 223.4 156 70.5
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 1.7e-56 223.0 152 68.4
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 2.2e-56 222.6 159 67.3
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 2.8e-56 222.2 152 69.1
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 4.8e-56 221.5 159 66.0
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 4.8e-56 221.5 158 66.5
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 1.1e-55 220.3 159 65.4
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 1.1e-55 220.3 152 69.1
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 1.1e-55 220.3 158 69.0
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 1.4e-55 219.9 164 64.6
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 2.4e-55 219.2 152 68.4
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 3.1e-55 218.8 152 69.1
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 4.1e-55 218.4 159 65.4
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 5.4e-55 218.0 152 68.4
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 5.4e-55 218.0 152 67.8
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 1.2e-54 216.9 152 66.4
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 1.2e-54 216.9 155 67.7
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 1.6e-54 216.5 158 67.7
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.6e-54 216.5 155 65.8
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 1.6e-54 216.5 152 66.4
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 2.0e-54 216.1 155 65.8
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 2.7e-54 215.7 151 68.2
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 2.7e-54 215.7 152 67.8
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 7.7e-54 214.2 152 67.1
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 1.0e-53 213.8 155 65.2
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.0e-53 213.8 150 66.7
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 1.3e-53 213.4 166 66.9
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 6.5e-53 211.1 169 60.9
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 6.5e-53 211.1 164 65.2
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 1.1e-52 210.3 209 54.1
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.9e-52 209.5 152 65.1
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 1.5e-49 199.9 159 61.6
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 2.0e-49 199.5 151 63.6
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 2.6e-49 199.1 151 63.6
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 9.8e-49 197.2 133 70.7
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 3.1e-47 192.2 238 46.2
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 7.3e-44 181.0 114 71.9
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 9.5e-44 180.6 115 71.3
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 1.2e-43 180.3 121 68.6
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 2.1e-43 179.5 124 67.7
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 8.9e-42 174.1 152 59.2
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 1.2e-41 173.7 117 69.2
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 1.7e-37 159.8 110 70.0
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.7e-37 159.8 108 71.3
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 3.6e-35 152.1 164 53.7
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 1.4e-34 150.2 92 73.9
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 8.3e-32 141.0 89 70.8
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 3.4e-25 119.0 156 42.9
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.2e-22 110.5 118 49.2
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 8.4e-16 87.8 98 45.9
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 1.5e-12 77.0 101 45.5
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 5.6e-12 75.1 81 55.6
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 3.1e-10 69.3 53 60.4
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 5.2e-10 68.6 68 48.5


User provided reference genes

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