Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0676900 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 2.6e-86 322.0 164 100.0
Zm00001eb156860 Zea mays HOM05D003644 ORTHO05D004305 2.3e-50 202.6 201 60.7
Zm00001eb360290 Zea mays HOM05D003644 ORTHO05D004305 2.8e-48 195.7 204 61.8
Zm00001eb343410 Zea mays HOM05D003644 ORTHO05D004305 1.7e-21 106.7 217 41.9
Os05g0559316 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 1.5e-12 77.0 118 50.0
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 2.5e-12 76.3 203 35.5
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 3.3e-12 75.9 183 36.6
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 4.3e-12 75.5 136 39.7
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 2.8e-11 72.8 166 39.8
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 2.8e-11 72.8 200 37.5
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 6.2e-11 71.6 161 36.6
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 8.1e-11 71.2 202 34.7
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 3.1e-10 69.3 208 35.1
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 1.2e-09 67.4 201 35.8
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 1.2e-09 67.4 194 34.0
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 1.5e-09 67.0 165 37.6
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 1.5e-09 67.0 204 32.8
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 2.0e-09 66.6 203 31.5
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 2.6e-09 66.2 200 33.0
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 3.4e-09 65.9 208 34.6
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 3.4e-09 65.9 207 36.2
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 4.4e-09 65.5 200 35.0
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 7.6e-09 64.7 186 34.4
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 7.6e-09 64.7 175 34.9
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 9.9e-09 64.3 198 33.8
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 1.3e-08 63.9 204 32.8
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.7e-08 63.5 199 34.2
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 2.9e-08 62.8 201 31.8
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 2.9e-08 62.8 195 34.4
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 3.8e-08 62.4 200 34.0
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 4.9e-08 62.0 159 34.0
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 6.4e-08 61.6 174 36.8
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 6.4e-08 61.6 130 42.3
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 8.4e-08 61.2 135 39.3
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 1.4e-07 60.5 181 35.4
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 1.4e-07 60.5 157 34.4
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 1.9e-07 60.1 124 40.3
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 2.4e-07 59.7 199 30.7
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 2.4e-07 59.7 194 33.0
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 3.2e-07 59.3 163 36.8
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 3.2e-07 59.3 203 33.0
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 4.2e-07 58.9 160 35.6
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 5.4e-07 58.5 199 33.2
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 7.1e-07 58.2 181 29.8
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 7.1e-07 58.2 170 34.7
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 9.3e-07 57.8 179 32.4
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 9.3e-07 57.8 179 32.4
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 9.3e-07 57.8 179 32.4
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 1.2e-06 57.4 166 37.3
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 1.2e-06 57.4 176 31.2
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 1.2e-06 57.4 170 34.7
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 1.2e-06 57.4 159 34.0
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 1.6e-06 57.0 184 32.6
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.6e-06 57.0 144 36.8
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 1.6e-06 57.0 167 31.7
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 2.1e-06 56.6 197 33.0
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 2.7e-06 56.2 98 37.8
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 2.7e-06 56.2 179 31.8
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 2.7e-06 56.2 202 30.7
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 3.5e-06 55.8 140 37.9
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 3.5e-06 55.8 165 32.1
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 4.6e-06 55.5 203 29.6
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 4.6e-06 55.5 184 32.6
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 4.6e-06 55.5 184 32.6
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 4.6e-06 55.5 131 38.9
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 4.6e-06 55.5 204 31.4
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 4.6e-06 55.5 174 33.9
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 6.0e-06 55.1 137 35.0
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 6.0e-06 55.1 184 31.0
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 6.0e-06 55.1 184 31.0
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 7.8e-06 54.7 164 36.6
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 7.8e-06 54.7 206 33.5
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 7.8e-06 54.7 203 31.0
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 7.8e-06 54.7 159 33.3


User provided reference genes

Program Settings