Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0593600 Oryza sativa ssp. japonica HOM05D005040 ORTHO05D005984 8.5e-79 297.0 153 100.0
Zm00001eb161080 Zea mays HOM05D005040 ORTHO05D005984 1.8e-73 279.3 153 91.5
AUR62011626 Chenopodium quinoa HOM05D005040 ORTHO05D005984 1.7e-63 246.1 150 76.7
Cc04_g03490 Coffea canephora HOM05D005040 ORTHO05D005984 1.7e-63 246.1 153 73.9
ClCG09G002180 Citrullus lanatus HOM05D005040 ORTHO05D005984 6.5e-63 244.2 151 76.2
Atru.chr1.3264 Acer truncatum HOM05D005040 ORTHO05D005984 8.5e-63 243.8 153 76.5
arahy.Tifrunner.gnm1.ann1.AGNB7P Arachis hypogaea HOM05D005040 ORTHO05D005984 1.5e-62 243.0 151 76.2
Gohir.A09G083300 Gossypium hirsutum HOM05D005040 ORTHO05D005984 1.5e-62 243.0 153 75.8
Thecc.06G086300 Theobroma cacao HOM05D005040 ORTHO05D005984 1.5e-62 243.0 153 75.8
Dinv38056 Davidia involucrata HOM05D005040 ORTHO05D005984 1.9e-62 242.7 153 77.1
Nitab4.5_0008982g0010 Nicotiana tabacum HOM05D005040 ORTHO05D005984 2.5e-62 242.3 151 74.2
Nitab4.5_0000671g0070 Nicotiana tabacum HOM05D005040 ORTHO05D005984 3.2e-62 241.9 151 75.5
Nitab4.5_0010263g0010 Nicotiana tabacum HOM05D005040 ORTHO05D005984 3.2e-62 241.9 151 75.5
arahy.Tifrunner.gnm1.ann1.MTRR1H Arachis hypogaea HOM05D005040 ORTHO05D005984 4.2e-62 241.5 150 76.0
CsaV3_7G033130 Cucumis sativus L. HOM05D005040 ORTHO05D005984 5.5e-62 241.1 153 74.5
Gorai.006G098900 Gossypium raimondii HOM05D005040 ORTHO05D005984 5.5e-62 241.1 151 75.5
MELO3C024227.2 Cucumis melo HOM05D005040 ORTHO05D005984 1.2e-61 240.0 153 75.2
Gohir.D09G083300 Gossypium hirsutum HOM05D005040 ORTHO05D005984 1.2e-61 240.0 153 74.5
Gorai.011G077000 Gossypium raimondii HOM05D005040 ORTHO05D005984 1.6e-61 239.6 153 73.9
Peaxi162Scf00015g00334 Petunia axillaris HOM05D005040 ORTHO05D005984 1.6e-61 239.6 152 73.0
PGSC0003DMG400002565 Solanum tuberosum HOM05D005040 ORTHO05D005984 2.1e-61 239.2 150 73.3
HanXRQChr09g0275291 Helianthus annuus HOM05D005040 ORTHO05D005984 2.7e-61 238.8 153 74.5
MD09G1213900 Malus domestica HOM05D005040 ORTHO05D005984 2.7e-61 238.8 153 73.2
Solyc03g120240.3 Solanum lycopersicum HOM05D005040 ORTHO05D005984 2.7e-61 238.8 150 72.7
Lj3g0025298 Lotus japonicus HOM05D005040 ORTHO05D005984 3.6e-61 238.4 153 71.9
GSVIVG01017116001 Vitis vinifera HOM05D005040 ORTHO05D005984 6.1e-61 237.7 153 75.8
PSO063G7160 Papaver somniferum HOM05D005040 ORTHO05D005984 8.0e-61 237.3 153 72.5
Sopen03g039120 Solanum pennellii HOM05D005040 ORTHO05D005984 1.0e-60 236.9 150 72.0
Lj3g0009600 Lotus japonicus HOM05D005040 ORTHO05D005984 1.4e-60 236.5 153 73.9
MD17G1196000 Malus domestica HOM05D005040 ORTHO05D005984 1.4e-60 236.5 153 72.5
Eucgr.J02995 Eucalyptus grandis HOM05D005040 ORTHO05D005984 1.8e-60 236.1 147 77.6
Medtr4g011980 Medicago truncatula HOM05D005040 ORTHO05D005984 1.8e-60 236.1 153 72.5
Prupe.3G071900 Prunus persica HOM05D005040 ORTHO05D005984 1.8e-60 236.1 153 72.5
PSO782G4813 Papaver somniferum HOM05D005040 ORTHO05D005984 2.3e-60 235.7 153 71.9
Manes.04G123000 Manihot esculenta HOM05D005040 ORTHO05D005984 3.0e-60 235.3 153 71.2
Nn8g39231 Nelumbo nucifera HOM05D005040 ORTHO05D005984 3.0e-60 235.3 152 75.7
Gohir.A10G079800 Gossypium hirsutum HOM05D005040 ORTHO05D005984 5.2e-60 234.6 147 74.8
Lalb_Chr25g0279631 Lupinus albus HOM05D005040 ORTHO05D005984 6.7e-60 234.2 153 70.6
Gohir.D10G071700 Gossypium hirsutum HOM05D005040 ORTHO05D005984 8.8e-60 233.8 153 72.5
PGSC0003DMG400028614 Solanum tuberosum HOM05D005040 ORTHO05D005984 8.8e-60 233.8 151 70.9
TPR.G24183 Trifolium pratense HOM05D005040 ORTHO05D005984 8.8e-60 233.8 153 71.2
arahy.Tifrunner.gnm1.ann1.QU6Z4C Arachis hypogaea HOM05D005040 ORTHO05D005984 1.1e-59 233.4 151 71.5
CSS0018986 Camellia sinensis var. sinensis HOM05D005040 ORTHO05D005984 1.1e-59 233.4 153 73.2
CAN.G438.63 Capsicum annuum HOM05D005040 ORTHO05D005984 1.1e-59 233.4 151 71.5
Nn2g11793 Nelumbo nucifera HOM05D005040 ORTHO05D005984 1.1e-59 233.4 151 74.2
Sed0010677 Sechium edule HOM05D005040 ORTHO05D005984 1.1e-59 233.4 153 73.9
HanXRQChr16g0501001 Helianthus annuus HOM05D005040 ORTHO05D005984 1.5e-59 233.0 153 72.5
arahy.Tifrunner.gnm1.ann1.PJIU2I Arachis hypogaea HOM05D005040 ORTHO05D005984 2.0e-59 232.6 153 70.6
Rhsim08G0220800 Rhododendron simsii HOM05D005040 ORTHO05D005984 2.0e-59 232.6 153 71.9
Ciclev10026697m.g Citrus clementina HOM05D005040 ORTHO05D005984 2.6e-59 232.3 153 71.9
Migut.I00862 Erythranthe guttata HOM05D005040 ORTHO05D005984 2.6e-59 232.3 153 71.2
Lj9C507G12 Lonicera japonica HOM05D005040 ORTHO05D005984 2.6e-59 232.3 151 70.2
Manes.11G047900 Manihot esculenta HOM05D005040 ORTHO05D005984 2.6e-59 232.3 153 70.6
Sopen12g022320 Solanum pennellii HOM05D005040 ORTHO05D005984 2.6e-59 232.3 153 71.2
CANSAT56G1939 Cannabis sativa HOM05D005040 ORTHO05D005984 3.3e-59 231.9 153 70.6
CSS0035607 Camellia sinensis var. sinensis HOM05D005040 ORTHO05D005984 5.7e-59 231.1 150 72.0
Lalb_Chr04g0262641 Lupinus albus HOM05D005040 ORTHO05D005984 7.5e-59 230.7 153 70.6
TAR626G1436 Trochodendron aralioides HOM05D005040 ORTHO05D005984 7.5e-59 230.7 145 75.2
Sc21g0005090 Simmondsia chinensis HOM05D005040 ORTHO05D005984 1.3e-58 229.9 153 68.6
Hund06608 Selenicereus undatus HOM05D005040 ORTHO05D005984 1.7e-58 229.6 151 71.5
SGA_v2.0_scaffold37G14817 Striga asiatica HOM05D005040 ORTHO05D005984 1.7e-58 229.6 151 70.2
HPP92_007677 Vanilla planifolia HOM05D005040 ORTHO05D005984 1.7e-58 229.6 153 68.0
CiPaw.01G239800 Carya illinoinensis HOM05D005040 ORTHO05D005984 2.2e-58 229.2 151 70.2
Duzib235G0181 Durio zibethinus HOM05D005040 ORTHO05D005984 2.2e-58 229.2 145 73.8
Psat7g252720 Pisum sativum HOM05D005040 ORTHO05D005984 2.2e-58 229.2 153 69.3
TAR624G1120 Trochodendron aralioides HOM05D005040 ORTHO05D005984 2.2e-58 229.2 151 70.9
EL10Ac9g21995 Beta vulgaris HOM05D005040 ORTHO05D005984 4.8e-58 228.0 149 73.8
CSS0024080 Camellia sinensis var. sinensis HOM05D005040 ORTHO05D005984 4.8e-58 228.0 153 70.6
Gohir.A05G129132 Gossypium hirsutum HOM05D005040 ORTHO05D005984 4.8e-58 228.0 144 72.9
Phvul.010G150900 Phaseolus vulgaris HOM05D005040 ORTHO05D005984 4.8e-58 228.0 153 67.3
Hund00613 Selenicereus undatus HOM05D005040 ORTHO05D005984 4.8e-58 228.0 153 69.9
TWI75G0398 Tripterygium wilfordii HOM05D005040 ORTHO05D005984 4.8e-58 228.0 153 69.3
PGR102G2548 Punica granatum HOM05D005040 ORTHO05D005984 6.3e-58 227.6 153 72.5
Sabra03G0031500 Salix brachista HOM05D005040 ORTHO05D005984 8.2e-58 227.3 152 71.7
VMungo0331G0128 Vigna mungo HOM05D005040 ORTHO05D005984 1.1e-57 226.9 151 67.5
Gorai.009G133000 Gossypium raimondii HOM05D005040 ORTHO05D005984 1.8e-57 226.1 153 69.9
Lj5C61G9 Lonicera japonica HOM05D001315 ORTHO05D005984 1.8e-57 226.1 151 70.9
CiPaw.02G151500 Carya illinoinensis HOM05D005040 ORTHO05D005984 2.4e-57 225.7 150 70.0
unitig_8.g3893 Utricularia gibba HOM05D005040 ORTHO05D005984 2.4e-57 225.7 153 70.6
Glyma.08G207000 Glycine max HOM05D005040 ORTHO05D005984 4.1e-57 224.9 153 66.7
Oeu033483.1 Olea europaea HOM05D005040 ORTHO05D005984 7.0e-57 224.2 151 68.9
DCAR_007558 Daucus carota HOM05D005040 ORTHO05D005984 2.0e-56 222.6 151 69.5
Sp5g35760 Schrenkiella parvula HOM05D005040 ORTHO05D005984 2.0e-56 222.6 153 67.3
FAN09G4279 Fragaria x ananassa HOM05D005040 ORTHO05D005984 2.7e-56 222.2 155 69.0
SEGI_18303 Sequoiadendron giganteum HOM05D005040 ORTHO05D005984 2.7e-56 222.2 151 69.5
Glyma.07G006400 Glycine max HOM05D005040 ORTHO05D005984 3.5e-56 221.9 153 66.0
Potri.001G179500 Populus trichocarpa HOM05D005040 ORTHO05D005984 3.5e-56 221.9 153 70.6
FvH4_6g31060 Fragaria vesca HOM05D005040 ORTHO05D005984 4.5e-56 221.5 153 69.3
RcHm_v2.0_Chr2g0137751 Rosa chinensis HOM05D005040 ORTHO05D005984 4.5e-56 221.5 155 68.4
TWI18G1133 Tripterygium wilfordii HOM05D005040 ORTHO05D005984 5.9e-56 221.1 153 67.3
FAN14G0270 Fragaria x ananassa HOM05D005040 ORTHO05D005984 7.7e-56 220.7 154 68.2
Rhsim12G0197400 Rhododendron simsii HOM05D005040 ORTHO05D005984 7.7e-56 220.7 152 66.4
FAN02G3733 Fragaria x ananassa HOM05D005040 ORTHO05D005984 1.3e-55 219.9 153 68.6
Potri.003G056100 Populus trichocarpa HOM05D005040 ORTHO05D005984 1.3e-55 219.9 153 70.6
SGA_v2.0_scaffold4G01995 Striga asiatica HOM05D005040 ORTHO05D005984 1.3e-55 219.9 150 66.7
Thhalv10019282m.g Eutrema salsugineum HOM05D005040 ORTHO05D005984 1.7e-55 219.5 153 67.3
Sabra01G0147300 Salix brachista HOM05D005040 ORTHO05D005984 1.7e-55 219.5 151 70.9
vmacro16949 Vaccinium macrocarpon HOM05D005040 ORTHO05D005984 1.7e-55 219.5 151 66.9
Aa31LG4G290 Aethionema arabicum HOM05D001315 ORTHO05D001618 2.2e-55 219.2 150 66.0
Gohir.D05G128900 Gossypium hirsutum HOM05D005040 ORTHO05D005984 5.0e-55 218.0 153 68.6
BraA02t07378Z Brassica rapa HOM05D005040 ORTHO05D005984 8.5e-55 217.2 150 66.0
BcaC03g16009 Brassica carinata HOM05D005040 ORTHO05D005984 1.1e-54 216.9 150 67.3
C02p37640 Brassica napus HOM05D005040 ORTHO05D005984 1.5e-54 216.5 150 66.7
FAN05G0686 Fragaria x ananassa HOM05D005040 ORTHO05D005984 1.5e-54 216.5 153 68.6
AL2G41560 Arabidopsis lyrata HOM05D005040 ORTHO05D005984 1.9e-54 216.1 153 66.0
BolC2t09779H Brassica oleracea HOM05D005040 ORTHO05D005984 1.9e-54 216.1 150 67.3
A07p26430 Brassica napus HOM05D001315 ORTHO05D001618 2.5e-54 215.7 151 65.6
CARHR074500 Cardamine hirsuta HOM05D005040 ORTHO05D005984 2.5e-54 215.7 153 64.7
Oeu025385.1 Olea europaea HOM05D005040 ORTHO05D005984 2.5e-54 215.7 151 66.2
BraA07t30287Z Brassica rapa HOM05D001315 ORTHO05D001618 3.2e-54 215.3 152 64.5
C06p28820 Brassica napus HOM05D001315 ORTHO05D001618 7.2e-54 214.2 150 65.3
QL05p024322 Quercus lobata HOM05D005040 ORTHO05D005984 9.4e-54 213.8 150 66.7
AT1G79985 Arabidopsis thaliana HOM05D005040 ORTHO05D005984 1.6e-53 213.0 153 65.4
vmacro18916 Vaccinium macrocarpon HOM05D005040 ORTHO05D005984 1.6e-53 213.0 145 68.3
Duzib192G0809 Durio zibethinus HOM05D005040 ORTHO05D005984 6.1e-53 211.1 147 69.4
Carub.0002s2753 Capsella rubella HOM05D005040 ORTHO05D005984 1.0e-52 210.3 153 64.7
A02p23850 Brassica napus HOM05D005040 ORTHO05D005984 9.8e-51 203.8 168 58.9
FvH4_6g49470 Fragaria vesca HOM05D005040 ORTHO05D005984 1.3e-50 203.4 155 65.2
Nitab4.5_0002438g0060 Nicotiana tabacum HOM05D005040 ORTHO05D005984 2.8e-50 202.2 150 64.0
FAN14G2190 Fragaria x ananassa HOM05D005040 ORTHO05D005984 3.7e-50 201.8 155 63.9
THA.LOC104813561 Tarenaya hassleriana HOM05D005040 ORTHO05D005984 3.7e-50 201.8 153 62.1
Mapoly0002s0050 Marchantia polymorpha HOM05D005040 ORTHO05D005984 8.3e-50 200.7 153 62.1
THA.LOC104821737 Tarenaya hassleriana HOM05D005040 ORTHO05D005984 1.4e-49 199.9 151 61.6
Gorai.002G059200 Gossypium raimondii HOM05D005040 ORTHO05D005984 4.1e-49 198.4 142 66.9
BcaB05g25300 Brassica carinata HOM05D005040 ORTHO05D005984 2.0e-48 196.1 153 61.4
CBR_g53740 Chara braunii HOM05D005040 ORTHO05D005984 5.9e-48 194.5 145 60.7
ECA232G2706 Erigeron canadensis HOM05D005040 ORTHO05D005984 4.2e-46 188.3 122 74.6
Gohir.A02G121600 Gossypium hirsutum HOM05D005040 ORTHO05D005984 5.5e-46 188.0 153 61.4
Lsat_1_v5_gn_4_103600 Lactuca sativa HOM05D005040 ORTHO05D005984 3.6e-45 185.3 119 72.3
Actinidia24761 Actinidia chinensis HOM05D005040 ORTHO05D005984 6.3e-42 174.5 120 67.5
Pp3c14_26240 Physcomitrium patens HOM05D005040 ORTHO05D005984 1.8e-41 172.9 153 53.6
BcaC08g45282 Brassica carinata HOM05D005040 ORTHO05D005984 7.0e-41 171.0 128 62.5
CDE02G1346 Ceratophyllum demersum HOM05D005040 ORTHO05D005984 1.3e-39 166.8 111 70.3
unitig_22.g5468 Utricularia gibba HOM05D005040 ORTHO05D005984 5.0e-39 164.9 181 51.9
CDE04G1379 Ceratophyllum demersum HOM05D005040 ORTHO05D005984 3.3e-38 162.2 111 67.6
Cre10.g423950 Chlamydomonas reinhardtii HOM05D005040 ORTHO05D005984 6.8e-36 154.5 149 52.3
Zm00001eb357580 Zea mays HOM05D005040 ORTHO05D005984 3.2e-33 145.6 75 94.7
Actinidia01801 Actinidia chinensis HOM05D005040 ORTHO05D005984 8.6e-31 137.5 95 68.4
Lalb_Chr01g0012631 Lupinus albus HOM05D005040 ORTHO05D005984 2.3e-28 129.4 75 77.3
Actinidia32759 Actinidia chinensis HOM05D005040 ORTHO05D005984 1.5e-27 126.7 78 75.6
Gohir.D03G064100 Gossypium hirsutum HOM05D005040 ORTHO05D005984 4.4e-27 125.2 100 64.0
arahy.Tifrunner.gnm1.ann1.1DTY35 Arachis hypogaea HOM05D005040 ORTHO05D005984 3.7e-26 122.1 120 51.7
PRCOL_00001887 Prasinoderma coloniale HOM05D005040 ORTHO05D005984 3.7e-26 122.1 144 45.1
Gorai.005G119900 Gossypium raimondii HOM05D005040 ORTHO05D005984 6.6e-23 111.3 67 74.6
Gohir.D02G105550 Gossypium hirsutum HOM05D005040 ORTHO05D005984 8.6e-23 110.9 65 76.9
MBI01_g34903_MAGBIO Magnolia biondii HOM05D005040 ORTHO05D005984 7.3e-22 107.8 75 68.0
SalBow2G1342 Salvia bowleyana HOM05D005040 ORTHO05D005984 1.8e-20 103.2 80 62.5
Pp3c17_23510 Physcomitrium patens HOM05D005040 ORTHO05D005984 2.3e-20 102.8 149 38.9
Lalb_Chr01g0012641 Lupinus albus HOM05D005040 ORTHO05D005984 1.5e-19 100.1 75 61.3
DCAR_026311 Daucus carota HOM05D001315 ORTHO05D001618 9.8e-19 97.4 78 61.5
SalBow2G3126 Salvia bowleyana HOM05D005040 ORTHO05D005984 2.9e-18 95.9 89 52.8
Solyc12g043060.1 Solanum lycopersicum HOM05D005040 ORTHO05D005984 3.9e-07 58.9 48 58.3


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