Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0245901 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 4.2e-272 940.6 443 100.0
Os01g0245700 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 3.4e-261 904.4 443 97.5
Os01g0245532 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 2.6e-56 223.8 392 37.8
Os01g0244400 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 8.8e-52 208.8 415 36.1
Os01g0244000 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 2.2e-47 194.1 409 34.7
Os03g0333800 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 3.8e-39 166.8 410 32.4
Os01g0244150 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 2.7e-37 160.6 224 41.5
Os01g0240700 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 2.1e-29 134.4 442 28.7
Zm00001eb240250 Zea mays HOM05D009075 ORTHO05D011069 8.8e-28 129.0 434 29.3
Zm00001eb240300 Zea mays HOM05D009075 ORTHO05D011069 4.4e-27 126.7 418 28.9
Zm00001eb083060 Zea mays HOM05D009075 ORTHO05D011069 9.8e-27 125.6 453 27.6
Zm00001eb083050 Zea mays HOM05D009075 ORTHO05D011069 1.7e-26 124.8 425 27.8
Zm00001eb284040 Zea mays HOM05D009075 ORTHO05D011069 1.4e-25 121.7 433 24.9
Zm00001eb240290 Zea mays HOM05D009075 ORTHO05D011069 5.4e-25 119.8 413 27.6
Os12g0162800 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 7.0e-25 119.4 390 26.2
Zm00001eb284060 Zea mays HOM05D009075 ORTHO05D011069 9.1e-25 119.0 432 27.1
Zm00001eb130660 Zea mays HOM05D009075 ORTHO05D011069 3.5e-24 117.1 404 26.5
Os06g0307900 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.0e-23 115.5 416 28.6
Zm00001eb130840 Zea mays HOM05D009075 ORTHO05D011069 5.6e-22 109.8 269 30.5
Zm00001eb192970 Zea mays HOM05D009075 ORTHO05D011069 4.7e-21 106.7 240 30.4
Zm00001eb119380 Zea mays HOM05D009075 ORTHO05D011069 4.0e-20 103.6 201 33.3
Os03g0111600 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 6.8e-20 102.8 309 28.8
Hund23305 Selenicereus undatus HOM05D001340 ORTHO05D011069 6.8e-20 102.8 370 24.6
Zm00001eb284050 Zea mays HOM05D009075 ORTHO05D011069 1.5e-19 101.7 395 24.8
Zm00001eb234910 Zea mays HOM05D009075 ORTHO05D011069 2.3e-15 87.8 246 27.6
Os05g0269100 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 6.6e-15 86.3 186 30.1
Os05g0467700 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.2e-13 82.0 405 25.4
Os05g0468400 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.6e-13 81.6 247 25.5
Os05g0468200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 2.1e-13 81.3 319 25.1
Os06g0161400 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D301815 4.7e-13 80.1 391 25.8
Os05g0468100 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 6.2e-13 79.7 210 28.6
Os05g0467400 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 6.8e-12 76.3 219 26.5
Zm00001eb243430 Zea mays HOM05D009075 ORTHO05D011069 1.2e-11 75.5 169 34.9
Os05g0250000 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 4.4e-11 73.6 139 30.2
Os05g0249800 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 5.8e-11 73.2 142 31.7
AUR62020517 Chenopodium quinoa HOM05D002743 ORTHO05D002895 9.2e-09 65.9 238 23.1
AUR62031620 Chenopodium quinoa HOM05D001340 ORTHO05D005342 6.0e-08 63.2 236 22.9
Zm00001eb083090 Zea mays HOM05D009075 ORTHO05D011069 1.0e-07 62.4 104 35.6
Os05g0251200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 3.9e-07 60.5 113 26.5
Os05g0467900 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 3.9e-07 60.5 170 23.5
Os05g0250200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 4.3e-06 57.0 142 24.6


User provided reference genes

Program Settings