Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0245700 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 7.9e-271 936.4 440 100.0
Os01g0245901 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 7.4e-261 903.3 443 97.5
Os01g0245532 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 2.4e-57 227.3 389 38.0
Os01g0244400 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.6e-50 204.5 414 35.5
Os01g0244000 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 9.3e-46 188.7 407 35.1
Os03g0333800 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.0e-39 168.7 407 31.9
Os01g0244150 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 8.5e-39 165.6 222 41.9
Zm00001eb083050 Zea mays HOM05D009075 ORTHO05D011069 2.1e-29 134.4 426 28.2
Os01g0240700 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 6.1e-29 132.9 425 29.6
Zm00001eb240250 Zea mays HOM05D009075 ORTHO05D011069 6.7e-28 129.4 432 29.9
Zm00001eb284060 Zea mays HOM05D009075 ORTHO05D011069 2.6e-27 127.5 431 27.6
Zm00001eb083060 Zea mays HOM05D009075 ORTHO05D011069 3.3e-27 127.1 436 28.0
Zm00001eb240300 Zea mays HOM05D009075 ORTHO05D011069 4.4e-27 126.7 410 28.3
Zm00001eb284040 Zea mays HOM05D009075 ORTHO05D011069 2.2e-26 124.4 432 25.5
Zm00001eb083100 Zea mays HOM05D009075 ORTHO05D011069 3.7e-26 123.6 409 26.7
Zm00001eb240290 Zea mays HOM05D009075 ORTHO05D011069 1.8e-25 121.3 410 28.0
Zm00001eb130660 Zea mays HOM05D009075 ORTHO05D011069 2.4e-25 120.9 401 27.2
Os12g0162800 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 3.5e-24 117.1 388 26.3
Os06g0307900 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 7.7e-24 115.9 415 28.7
Hund23304 Selenicereus undatus HOM05D009075 ORTHO05D011069 1.0e-23 115.5 369 27.6
Zm00001eb130840 Zea mays HOM05D009075 ORTHO05D011069 2.2e-23 114.4 267 30.7
Os01g0240600 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.5e-22 111.7 287 32.4
Zm00001eb192970 Zea mays HOM05D009075 ORTHO05D011069 4.2e-22 110.2 240 30.8
Os03g0111600 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.2e-21 108.6 306 28.8
Zm00001eb284050 Zea mays HOM05D009075 ORTHO05D011069 4.7e-21 106.7 394 25.4
Zm00001eb119380 Zea mays HOM05D009075 ORTHO05D011069 5.2e-20 103.2 201 33.3
Hund23305 Selenicereus undatus HOM05D001340 ORTHO05D011069 1.1e-19 102.1 367 24.3
Zm00001eb234910 Zea mays HOM05D009075 ORTHO05D011069 2.7e-16 90.9 269 26.4
Os05g0269100 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 3.8e-15 87.0 194 29.9
Os05g0468400 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 5.5e-14 83.2 238 26.5
Os05g0468200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 7.2e-14 82.8 319 24.8
Os06g0161400 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D301815 9.4e-14 82.4 392 25.8
Os05g0468100 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 2.7e-13 80.9 181 29.3
Os05g0250000 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 5.2e-12 76.6 195 26.7
Zm00001eb243430 Zea mays HOM05D009075 ORTHO05D011069 6.8e-12 76.3 169 35.5
AUR62020544 Chenopodium quinoa HOM05D017185 ORTHO05D002895 8.8e-12 75.9 213 24.9
Os05g0249800 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 8.8e-12 75.9 210 27.1
Os05g0467400 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.5e-11 75.1 219 26.5
Os05g0467700 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 5.7e-11 73.2 213 26.8
AUR62020517 Chenopodium quinoa HOM05D002743 ORTHO05D002895 2.4e-09 67.8 208 25.0
AUR62031620 Chenopodium quinoa HOM05D001340 ORTHO05D005342 2.0e-08 64.7 206 24.8
Zm00001eb083090 Zea mays HOM05D009075 ORTHO05D011069 2.7e-08 64.3 167 28.7
Os05g0467900 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.3e-07 62.0 199 23.1
Os05g0251200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 6.5e-07 59.7 113 26.5
AUR62015688 Chenopodium quinoa HOM05D001340 ORTHO05D005342 8.5e-07 59.3 82 37.8
Os01g0119500 Oryza sativa ssp. japonica HOM05D020165 ORTHO05D025971 4.2e-06 57.0 255 22.7


User provided reference genes

Program Settings