Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0243200 Oryza sativa ssp. japonica HOM05D000653 ORTHO05D008581 3.2e-37 157.9 80 100.0
Zm00001eb122330 Zea mays HOM05D000653 ORTHO05D008581 2.3e-27 125.2 76 82.9
RcHm_v2.0_Chr5g0039011 Rosa chinensis HOM05D000653 ORTHO05D008581 4.8e-25 117.5 67 79.1
FvH4_3g22370 Fragaria vesca HOM05D000653 ORTHO05D008581 1.1e-24 116.3 67 77.6
FAN11G1878 Fragaria x ananassa HOM05D000653 ORTHO05D008581 1.1e-24 116.3 67 77.6
FAN21G1877 Fragaria x ananassa HOM05D000653 ORTHO05D008581 1.1e-24 116.3 67 77.6
FAN25G0396 Fragaria x ananassa HOM05D000653 ORTHO05D008581 1.1e-24 116.3 67 77.6
Prupe.4G210100 Prunus persica HOM05D000653 ORTHO05D008581 1.4e-24 115.9 67 76.1
Lj6g0014582 Lotus japonicus HOM05D000653 ORTHO05D008581 2.4e-24 115.2 67 73.1
PGR031G3287 Punica granatum HOM05D000653 ORTHO05D008581 2.4e-24 115.2 67 76.1
CiPaw.12G128500 Carya illinoinensis HOM05D000653 ORTHO05D008581 3.1e-24 114.8 67 77.6
MBI02_g28328_MAGBIO Magnolia biondii HOM05D000653 ORTHO05D008581 3.1e-24 114.8 67 76.1
SGA_v2.0_scaffold9G05065 Striga asiatica HOM05D000653 ORTHO05D008581 3.1e-24 114.8 67 76.1
MD03G1205600 Malus domestica HOM05D000653 ORTHO05D008581 4.1e-24 114.4 67 74.6
Nn1g07111 Nelumbo nucifera HOM05D000653 ORTHO05D008581 5.3e-24 114.0 67 74.6
Cfa020374 Carpinus fangiana HOM05D000653 ORTHO05D008581 9.1e-24 113.2 67 76.1
HanXRQChr08g0220661 Helianthus annuus HOM05D000653 ORTHO05D008581 9.1e-24 113.2 67 73.1
Nitab4.5_0000749g0150 Nicotiana tabacum HOM05D000653 ORTHO05D008581 9.1e-24 113.2 67 74.6
VMungo0540G2289 Vigna mungo HOM05D000653 ORTHO05D008581 9.1e-24 113.2 67 74.6
Actinidia10723 Actinidia chinensis HOM05D000653 ORTHO05D008581 1.2e-23 112.8 67 76.1
arahy.Tifrunner.gnm1.ann1.D18SLP Arachis hypogaea HOM05D000653 ORTHO05D008581 1.2e-23 112.8 67 73.1
arahy.Tifrunner.gnm1.ann1.PN5ECJ Arachis hypogaea HOM05D000653 ORTHO05D008581 1.2e-23 112.8 67 73.1
DCAR_022554 Daucus carota HOM05D000653 ORTHO05D008581 1.2e-23 112.8 67 73.1
Duzib268G0251 Durio zibethinus HOM05D000653 ORTHO05D008581 1.2e-23 112.8 67 74.6
Sabra11G0123200 Salix brachista HOM05D000653 ORTHO05D008581 1.2e-23 112.8 67 74.6
Atru.chr2.3387 Acer truncatum HOM05D000653 ORTHO05D008581 1.5e-23 112.5 67 73.1
CANSAT80G0628 Cannabis sativa HOM05D000653 ORTHO05D008581 1.5e-23 112.5 67 76.1
Glyma.18G099700 Glycine max HOM05D000653 ORTHO05D008581 1.5e-23 112.5 67 73.1
Actinidia35334 Actinidia chinensis HOM05D000653 ORTHO05D008581 2.0e-23 112.1 67 73.1
Duzib213G0404 Durio zibethinus HOM05D000653 ORTHO05D008581 2.6e-23 111.7 67 73.1
Glyma.08G314500 Glycine max HOM05D000653 ORTHO05D008581 2.6e-23 111.7 67 71.6
Nitab4.5_0000653g0050 Nicotiana tabacum HOM05D000653 ORTHO05D008581 2.6e-23 111.7 67 73.1
Peaxi162Scf01097g00310 Petunia axillaris HOM05D000653 ORTHO05D008581 2.6e-23 111.7 67 73.1
QL08p011510 Quercus lobata HOM05D000653 ORTHO05D008581 2.6e-23 111.7 67 71.6
Thecc.07G043000 Theobroma cacao HOM05D000653 ORTHO05D008581 2.6e-23 111.7 67 73.1
CAN.G882.1 Capsicum annuum HOM05D000653 ORTHO05D008581 3.4e-23 111.3 67 74.6
Eucgr.F03457 Eucalyptus grandis HOM05D000653 ORTHO05D008581 3.4e-23 111.3 64 78.1
Lsat_1_v5_gn_1_1820 Lactuca sativa HOM05D000653 ORTHO05D008581 3.4e-23 111.3 67 71.6
Medtr3g051190 Medicago truncatula HOM05D000653 ORTHO05D008581 3.4e-23 111.3 67 73.1
Nn1g03575 Nelumbo nucifera HOM05D000653 ORTHO05D008581 3.4e-23 111.3 67 74.6
PGSC0003DMG400001096 Solanum tuberosum HOM05D000653 ORTHO05D008581 3.4e-23 111.3 67 71.6
AUR62026825 Chenopodium quinoa HOM05D000653 ORTHO05D008581 4.5e-23 110.9 67 71.6
Cc05_g13570 Coffea canephora HOM05D000653 ORTHO05D008581 4.5e-23 110.9 67 74.6
AL8G30310 Arabidopsis lyrata HOM05D000653 ORTHO05D008581 5.9e-23 110.5 67 73.1
AT5G54860 Arabidopsis thaliana HOM05D000653 ORTHO05D008581 5.9e-23 110.5 67 73.1
BcaB08g35853 Brassica carinata HOM05D000653 ORTHO05D008581 5.9e-23 110.5 67 73.1
CSS0008420 Camellia sinensis var. sinensis HOM05D000653 ORTHO05D008581 5.9e-23 110.5 64 78.1
CARHR268200 Cardamine hirsuta HOM05D000653 ORTHO05D008581 5.9e-23 110.5 67 73.1
Thhalv10013383m.g Eutrema salsugineum HOM05D000653 ORTHO05D008581 5.9e-23 110.5 67 73.1
Lalb_Chr20g0113931 Lupinus albus HOM05D000653 ORTHO05D008581 5.9e-23 110.5 67 71.6
TAR626G0986 Trochodendron aralioides HOM05D000653 ORTHO05D008581 5.9e-23 110.5 67 73.1
BcaC04g20290 Brassica carinata HOM05D000653 ORTHO05D008581 7.7e-23 110.2 67 73.1
A10p12200 Brassica napus HOM05D000653 ORTHO05D008581 7.7e-23 110.2 67 73.1
C09p45420 Brassica napus HOM05D000653 ORTHO05D008581 7.7e-23 110.2 67 73.1
BolC9t57411H Brassica oleracea HOM05D000653 ORTHO05D008581 7.7e-23 110.2 67 73.1
BraA10t43316Z Brassica rapa HOM05D000653 ORTHO05D008581 7.7e-23 110.2 67 73.1
Migut.H01838 Erythranthe guttata HOM05D000653 ORTHO05D008581 7.7e-23 110.2 67 73.1
Potri.011G137300 Populus trichocarpa HOM05D000653 ORTHO05D008581 7.7e-23 110.2 67 71.6
Sp6g16830 Schrenkiella parvula HOM05D000653 ORTHO05D008581 7.7e-23 110.2 67 71.6
THA.LOC104817660 Tarenaya hassleriana HOM05D000653 ORTHO05D008581 7.7e-23 110.2 67 73.1
Carub.0008s1516 Capsella rubella HOM05D000653 ORTHO05D008581 1.0e-22 109.8 67 71.6
Solyc12g005140.2 Solanum lycopersicum HOM05D000653 ORTHO05D008581 1.0e-22 109.8 67 73.1
Sopen12g001130 Solanum pennellii HOM05D000653 ORTHO05D008581 1.0e-22 109.8 67 73.1
EL10Ac4g07849 Beta vulgaris HOM05D000653 ORTHO05D008581 1.3e-22 109.4 67 68.7
Hma1.2p1_0673F.1_g201200 Hydrangea macrophylla HOM05D000653 ORTHO05D008581 1.3e-22 109.4 67 70.1
Potri.011G137400 Populus trichocarpa HOM05D000653 ORTHO05D008581 1.3e-22 109.4 67 71.6
Sc03g0008710 Simmondsia chinensis HOM05D000653 ORTHO05D008581 1.3e-22 109.4 67 71.6
Aa31LG3G10780 Aethionema arabicum HOM05D000653 ORTHO05D008581 1.7e-22 109.0 67 73.1
Hund23262 Selenicereus undatus HOM05D000653 ORTHO05D008581 2.2e-22 108.6 67 71.6
TWI38G0314 Tripterygium wilfordii HOM05D000653 ORTHO05D008581 2.2e-22 108.6 67 70.1
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 2.9e-22 108.2 67 71.6
Gohir.A13G138800 Gossypium hirsutum HOM05D000653 ORTHO05D008581 2.9e-22 108.2 64 75.0
Gohir.D13G143600 Gossypium hirsutum HOM05D000653 ORTHO05D008581 2.9e-22 108.2 64 75.0
Gorai.013G160400 Gossypium raimondii HOM05D000653 ORTHO05D008581 2.9e-22 108.2 64 75.0
RhsimUnG0251600 Rhododendron simsii HOM05D000653 ORTHO05D008581 2.9e-22 108.2 67 71.6
Ciclev10008106m.g Citrus clementina HOM05D000653 ORTHO05D008581 5.0e-22 107.5 60 78.3
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 5.0e-22 107.5 60 78.3
TPR.G16570 Trifolium pratense HOM05D000653 ORTHO05D008581 5.0e-22 107.5 67 70.1
Aqoxy3G03171 Aquilegia oxysepala HOM05D000653 ORTHO05D008581 6.5e-22 107.1 67 70.1
Psat5g194120 Pisum sativum HOM05D000653 ORTHO05D008581 6.5e-22 107.1 67 68.7
RcHm_v2.0_Chr5g0038911 Rosa chinensis HOM05D000653 ORTHO05D008581 6.5e-22 107.1 64 75.0
SEGI_10883 Sequoiadendron giganteum HOM05D000653 ORTHO05D008581 6.5e-22 107.1 67 70.1
Cpa.g.sc97.29 Carica papaya HOM05D000653 ORTHO05D008581 1.4e-21 105.9 67 68.7
GSVIVG01037614001 Vitis vinifera HOM05D000653 ORTHO05D008581 1.4e-21 105.9 67 68.7
PSO210G6519 Papaver somniferum HOM05D000653 ORTHO05D008581 5.5e-21 104.0 67 68.7
PSO832G4309 Papaver somniferum HOM05D000653 ORTHO05D008581 5.5e-21 104.0 67 68.7
HanXRQChr11g0336311 Helianthus annuus HOM05D000653 ORTHO05D008581 1.4e-19 99.4 67 64.2
SMO358G0697 Selaginella moellendorffii HOM05D000653 ORTHO05D008581 1.5e-18 95.9 67 64.2
Atru.chr2.3328 Acer truncatum HOM05D000653 ORTHO05D008581 4.5e-15 84.3 54 68.5
QL09p032928 Quercus lobata HOM05D000653 ORTHO05D008581 3.8e-14 81.3 49 69.4
Lj8A168T98 Lonicera japonica HOM05D000653 ORTHO05D008581 5.0e-14 80.9 43 81.4
AUR62015737 Chenopodium quinoa HOM05D000653 ORTHO05D008581 1.5e-13 79.3 52 65.4
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 1.5e-13 79.3 43 81.4
vmacro09730 Vaccinium macrocarpon HOM05D000653 ORTHO05D008581 1.2e-12 76.3 43 74.4
SHI26629 Sapria himalayana HOM05D000653 ORTHO05D008581 4.7e-12 74.3 43 74.4
AagrBONN_evm.TU.Sc2ySwM_362.2879 Anthoceros agrestis HOM05D000653 ORTHO05D008581 2.0e-10 68.9 67 47.8
Pp3c18_11000 Physcomitrium patens HOM05D000653 ORTHO05D003117 3.3e-10 68.2 65 49.2
Pp3c1_14900 Physcomitrium patens HOM05D000653 ORTHO05D003117 1.7e-09 65.9 64 51.6
Pp3c21_8500 Physcomitrium patens HOM05D000653 ORTHO05D003117 1.7e-09 65.9 64 48.4
FAN14G1973 Fragaria x ananassa HOM05D002706 ORTHO05D045850 1.8e-08 62.4 40 65.0
SEGI_16384 Sequoiadendron giganteum HOM05D000653 ORTHO05D003117 1.8e-08 62.4 74 40.5
Pp3c1_36490 Physcomitrium patens HOM05D000653 ORTHO05D008581 2.4e-08 62.0 67 43.3
Lsat_1_v5_gn_7_109440 Lactuca sativa HOM05D000653 ORTHO05D008581 4.1e-08 61.2 34 73.5
FvH4_6g09050 Fragaria vesca HOM05D014733 ORTHO05D045850 5.3e-08 60.8 40 62.5
Aa31LG2G2130 Aethionema arabicum HOM05D000653 ORTHO05D003117 2.2e-06 55.5 58 41.4
Sc19g0006500 Simmondsia chinensis HOM05D000653 ORTHO05D003117 2.2e-06 55.5 58 46.6
EL10Ac3g06809 Beta vulgaris HOM05D000653 ORTHO05D003117 6.5e-06 53.9 53 45.3


User provided reference genes

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