Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0240700 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 5.3e-245 850.5 412 100.0
Os01g0240600 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 6.3e-129 464.9 276 83.3
Os01g0244000 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 5.1e-70 269.2 397 41.8
Os01g0245532 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 2.9e-41 173.7 387 32.0
Os01g0244400 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.4e-30 138.3 401 28.7
Os06g0307900 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.4e-30 138.3 410 30.0
Os03g0111600 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 6.7e-30 136.0 396 30.6
Zm00001eb130840 Zea mays HOM05D009075 ORTHO05D011069 8.8e-30 135.6 262 35.1
Zm00001eb130660 Zea mays HOM05D009075 ORTHO05D011069 2.0e-29 134.4 380 29.2
Os01g0244150 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 2.6e-29 134.0 285 33.0
Os03g0333800 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.3e-28 131.7 418 30.9
Os01g0245700 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 2.4e-27 127.5 425 29.6
Os01g0245901 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 2.4e-27 127.5 442 28.7
Zm00001eb284040 Zea mays HOM05D009075 ORTHO05D011069 7.0e-27 125.9 389 30.1
Zm00001eb192970 Zea mays HOM05D009075 ORTHO05D011069 1.2e-26 125.2 301 31.6
Hund23304 Selenicereus undatus HOM05D009075 ORTHO05D011069 5.9e-26 122.9 368 27.7
Zm00001eb284050 Zea mays HOM05D009075 ORTHO05D011069 8.0e-23 112.5 376 29.3
Hund23305 Selenicereus undatus HOM05D001340 ORTHO05D011069 2.3e-22 110.9 403 27.5
Zm00001eb240300 Zea mays HOM05D009075 ORTHO05D011069 8.8e-22 109.0 401 27.4
Zm00001eb240290 Zea mays HOM05D009075 ORTHO05D011069 2.6e-21 107.5 398 27.9
Zm00001eb240250 Zea mays HOM05D009075 ORTHO05D011069 1.3e-20 105.1 447 26.0
Zm00001eb284060 Zea mays HOM05D009075 ORTHO05D011069 1.6e-18 98.2 354 30.5
Zm00001eb083050 Zea mays HOM05D009075 ORTHO05D011069 1.0e-17 95.5 371 27.2
Os05g0468400 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.3e-17 95.1 388 25.8
Zm00001eb083100 Zea mays HOM05D009075 ORTHO05D011069 1.5e-16 91.7 361 26.6
Zm00001eb119380 Zea mays HOM05D009075 ORTHO05D011069 1.5e-16 91.7 208 34.6
Os12g0162800 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.6e-15 88.2 373 26.0
Os05g0467400 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 4.7e-15 86.7 289 26.0
AUR62015660 Chenopodium quinoa HOM05D001340 ORTHO05D005342 6.1e-15 86.3 237 25.7
AUR62020544 Chenopodium quinoa HOM05D017185 ORTHO05D002895 1.4e-14 85.1 208 25.0
Os05g0467700 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 5.2e-14 83.2 312 25.3
Os05g0269100 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.5e-13 81.6 256 27.3
Os05g0249800 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 2.0e-13 81.3 278 26.3
Zm00001eb243430 Zea mays HOM05D009075 ORTHO05D011069 2.2e-12 77.8 270 27.8
Os05g0250000 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.4e-11 75.1 384 24.0
Os06g0161400 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D301815 7.0e-11 72.8 368 24.2
Os05g0467900 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.6e-10 71.6 413 24.2
AUR62020517 Chenopodium quinoa HOM05D002743 ORTHO05D002895 2.0e-10 71.2 240 26.2
Zm00001eb083090 Zea mays HOM05D009075 ORTHO05D011069 2.7e-10 70.9 322 25.8
AUR62031620 Chenopodium quinoa HOM05D001340 ORTHO05D005342 3.5e-10 70.5 240 26.2
Zm00001eb234910 Zea mays HOM05D009075 ORTHO05D011069 5.9e-10 69.7 298 26.5
Os05g0468200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 7.7e-10 69.3 250 29.2
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 1.0e-09 68.9 265 22.3
Os05g0468100 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 2.5e-08 64.3 241 26.6
Os05g0250200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 7.2e-08 62.8 353 22.7
AUR62020511 Chenopodium quinoa HOM05D001340 ORTHO05D011069 2.1e-07 61.2 258 22.9
AUR62020541 Chenopodium quinoa HOM05D001340 ORTHO05D005342 1.0e-06 58.9 69 40.6
Os05g0251200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 3.0e-06 57.4 177 27.7
EL10Ac1g01661 Beta vulgaris HOM05D001340 ORTHO05D005342 6.8e-06 56.2 277 24.5
Os01g0182100 Oryza sativa ssp. japonica HOM05D020165 ORTHO05D025971 6.8e-06 56.2 231 24.7


User provided reference genes

Program Settings