Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0182832 Oryza sativa ssp. japonica HOM05D004165 ORTHO05D005063 0.0e+00 1360.9 655 100.0
Zm00001eb062420 Zea mays HOM05D004165 ORTHO05D005063 1.2e-219 766.9 655 60.2
MBI01_g36155_MAGBIO Magnolia biondii HOM05D004165 ORTHO05D005063 3.3e-87 327.0 718 33.7
Aqoxy5G02023 Aquilegia oxysepala HOM05D004165 ORTHO05D005063 9.2e-82 308.9 726 30.0
TAR628G1404 Trochodendron aralioides HOM05D004165 ORTHO05D005063 3.5e-81 307.0 707 31.5
PSO210G1143 Papaver somniferum HOM05D004165 ORTHO05D005063 3.2e-74 283.9 695 29.4
Nn5g28841 Nelumbo nucifera HOM05D004165 ORTHO05D005063 9.2e-74 282.3 752 29.7
Dinv21242 Davidia involucrata HOM05D004165 ORTHO05D005063 1.0e-72 278.9 701 30.1
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 6.6e-72 276.2 708 31.6
Prupe.6G168600 Prunus persica HOM05D004165 ORTHO05D005063 8.6e-72 275.8 680 30.7
PSO170G0015 Papaver somniferum HOM05D004165 ORTHO05D005063 3.3e-71 273.9 683 29.6
Duzib147G0774 Durio zibethinus HOM05D004165 ORTHO05D005063 7.3e-71 272.7 679 30.5
Gorai.008G100800 Gossypium raimondii HOM05D004165 ORTHO05D005063 9.6e-71 272.3 722 29.4
Gohir.D12G093100 Gossypium hirsutum HOM05D004165 ORTHO05D005063 1.6e-70 271.6 721 29.3
Aa31LG6G15850 Aethionema arabicum HOM05D004165 ORTHO05D005063 2.1e-70 271.2 688 29.5
Thhalv10024179m.g Eutrema salsugineum HOM05D004165 ORTHO05D005063 3.6e-70 270.4 677 30.3
Gohir.A12G083100 Gossypium hirsutum HOM05D004165 ORTHO05D005063 4.7e-70 270.0 720 29.3
AT4G39420 Arabidopsis thaliana HOM05D004165 ORTHO05D005063 1.8e-69 268.1 685 30.1
A01p00380 Brassica napus HOM05D004165 ORTHO05D005063 5.2e-69 266.5 666 29.3
CARHR247290 Cardamine hirsuta HOM05D004165 ORTHO05D005063 5.2e-69 266.5 670 29.7
BraA01t00046Z Brassica rapa HOM05D004165 ORTHO05D005063 1.2e-68 265.4 666 29.1
Thecc.01G115900 Theobroma cacao HOM05D004165 ORTHO05D005063 1.2e-68 265.4 677 30.0
C01p00530 Brassica napus HOM05D004165 ORTHO05D005063 1.5e-68 265.0 687 30.0
BolC1t00056H Brassica oleracea HOM05D004165 ORTHO05D005063 1.5e-68 265.0 672 30.4
QL06p031599 Quercus lobata HOM05D004165 ORTHO05D005063 1.5e-68 265.0 698 29.8
HPP92_013326 Vanilla planifolia HOM05D004165 ORTHO05D005063 2.6e-68 264.2 674 30.9
CSS0013219 Camellia sinensis var. sinensis HOM05D004165 ORTHO05D005063 7.6e-68 262.7 711 30.5
Sp7g36440 Schrenkiella parvula HOM05D004165 ORTHO05D005063 7.6e-68 262.7 685 28.3
COL.COLO4_22365 Corchorus olitorius HOM05D004165 ORTHO05D005063 1.3e-67 261.9 676 29.6
AL7G11450 Arabidopsis lyrata HOM05D004165 ORTHO05D005063 3.8e-67 260.4 680 29.3
CiPaw.03G132500 Carya illinoinensis HOM05D004165 ORTHO05D005063 4.9e-67 260.0 696 30.0
ECA233G2130 Erigeron canadensis HOM05D004165 ORTHO05D005063 1.0e-64 252.3 631 31.2
Haze_25071 Corylus avellana HOM05D004165 ORTHO05D005063 1.3e-64 251.9 707 28.7
Atru.chr4.460 Acer truncatum HOM05D004165 ORTHO05D005063 2.3e-64 251.1 701 29.1
Cfa002775 Carpinus fangiana HOM05D004165 ORTHO05D005063 8.7e-64 249.2 714 28.3
Lj4C863G6 Lonicera japonica HOM05D004165 ORTHO05D005063 2.5e-63 247.7 622 30.2
Lj4g0014922 Lotus japonicus HOM05D004165 ORTHO05D005063 3.3e-63 247.3 688 27.8
Ciclev10024679m.g Citrus clementina HOM05D004165 ORTHO05D005063 4.3e-63 246.9 698 29.1
Peaxi162Scf00702g00617 Petunia axillaris HOM05D004165 ORTHO05D005063 9.6e-63 245.7 689 28.3
Medtr8g092100 Medicago truncatula HOM05D004165 ORTHO05D005063 5.3e-61 240.0 671 27.9
Nitab4.5_0009050g0010 Nicotiana tabacum HOM05D004165 ORTHO05D005063 5.3e-61 240.0 688 28.2
Psat7g050200 Pisum sativum HOM05D004165 ORTHO05D005063 6.9e-61 239.6 707 27.3
CANSAT01G1143 Cannabis sativa HOM05D004165 ORTHO05D005063 1.2e-60 238.8 716 28.5
Carub.0007s0134 Capsella rubella HOM05D004165 ORTHO05D005063 2.6e-60 237.7 677 27.9
THA.LOC104804480 Tarenaya hassleriana HOM05D004165 ORTHO05D005063 4.5e-60 236.9 654 29.7
MD15G1330600 Malus domestica HOM05D004165 ORTHO05D005063 5.8e-60 236.5 707 28.0
vmacro12886 Vaccinium macrocarpon HOM05D004165 ORTHO05D005063 5.8e-60 236.5 736 28.3
FvH4_1g23050 Fragaria vesca HOM05D004165 ORTHO05D005063 7.6e-60 236.1 711 27.3
FAN19G2841 Fragaria x ananassa HOM05D004165 ORTHO05D005063 7.6e-60 236.1 711 27.1
CAN.G1044.9 Capsicum annuum HOM05D004165 ORTHO05D005063 2.2e-59 234.6 680 27.2
Nitab4.5_0000184g0120 Nicotiana tabacum HOM05D004165 ORTHO05D005063 2.2e-59 234.6 693 28.1
Ca_17683_v3 Cicer arietinum L. HOM05D004165 ORTHO05D005063 2.9e-59 234.2 712 27.0
Potri.005G086100 Populus trichocarpa HOM05D004165 ORTHO05D005063 2.9e-59 234.2 679 28.6
Sopen04g022920 Solanum pennellii HOM05D004165 ORTHO05D005063 4.9e-59 233.4 683 26.9
SGA_v2.0_scaffold2G01283 Striga asiatica HOM05D004165 ORTHO05D005063 8.4e-59 232.6 672 28.6
FAN23G0468 Fragaria x ananassa HOM05D004165 ORTHO05D005063 1.4e-58 231.9 700 27.1
TPR.G2248 Trifolium pratense HOM05D004165 ORTHO05D005063 2.4e-58 231.1 705 27.0
FAN26G2965 Fragaria x ananassa HOM05D004165 ORTHO05D005063 7.1e-58 229.6 695 27.1
VMungo0251G0498 Vigna mungo HOM05D004165 ORTHO05D005063 1.6e-57 228.4 679 28.1
Manes.12G144600 Manihot esculenta HOM05D004165 ORTHO05D005063 3.5e-57 227.3 672 28.6
Glyma.08G143200 Glycine max HOM05D004165 ORTHO05D005063 4.6e-57 226.9 678 27.6
RcHm_v2.0_Chr2g0117761 Rosa chinensis HOM05D004165 ORTHO05D005063 2.3e-56 224.6 689 26.9
GSVIVG01022257001 Vitis vinifera HOM05D004165 ORTHO05D005063 5.1e-56 223.4 654 27.2
TPR.G2323 Trifolium pratense HOM05D004165 ORTHO05D005063 8.7e-56 222.6 679 28.1
Potri.007G078650 Populus trichocarpa HOM05D004165 ORTHO05D005063 1.1e-55 222.2 680 27.9
Cc07_g16560 Coffea canephora HOM05D004165 ORTHO05D005063 1.5e-55 221.9 696 27.0
FAN28G2110 Fragaria x ananassa HOM05D004165 ORTHO05D005063 1.9e-55 221.5 717 27.2
arahy.Tifrunner.gnm1.ann1.F6TX6D Arachis hypogaea HOM05D004165 ORTHO05D005063 4.3e-55 220.3 665 27.2
Migut.H02450 Erythranthe guttata HOM05D004165 ORTHO05D005063 1.3e-54 218.8 718 26.5
PGR004G2408 Punica granatum HOM05D004165 ORTHO05D005063 1.6e-54 218.4 741 28.2
HanXRQChr08g0218061 Helianthus annuus HOM05D004165 ORTHO05D005063 6.2e-54 216.5 635 29.0
Phvul.002G266300 Phaseolus vulgaris HOM05D004165 ORTHO05D005063 6.2e-54 216.5 660 27.7
arahy.Tifrunner.gnm1.ann1.KAY7L7 Arachis hypogaea HOM05D004165 ORTHO05D005063 1.1e-53 215.7 683 27.7
Actinidia28449 Actinidia chinensis HOM05D004165 ORTHO05D005063 6.9e-53 213.0 672 28.3
Lalb_Chr13g0296271 Lupinus albus HOM05D004165 ORTHO05D005063 9.0e-53 212.6 680 27.4
CsaV3_6G042210 Cucumis sativus L. HOM05D004165 ORTHO05D005063 1.2e-52 212.2 729 27.4
Sabra05G0071000 Salix brachista HOM05D004165 ORTHO05D005063 1.5e-52 211.8 683 26.9
Sc03g0004750 Simmondsia chinensis HOM05D004165 ORTHO05D005063 2.6e-52 211.1 700 28.4
Lsat_1_v5_gn_9_57180 Lactuca sativa HOM05D004165 ORTHO05D005063 9.9e-52 209.1 617 28.7
MSTRG.23305 Avicennia marina HOM05D004165 ORTHO05D005063 2.2e-51 208.0 673 27.6
CDE07G1151 Ceratophyllum demersum HOM05D004165 ORTHO05D005063 2.9e-51 207.6 687 27.1
AUR62017931 Chenopodium quinoa HOM05D004165 ORTHO05D005063 6.4e-51 206.5 672 28.0
MELO3C007461.2 Cucumis melo HOM05D004165 ORTHO05D005063 3.2e-50 204.1 747 26.6
ClCG01G015940 Citrullus lanatus HOM05D004165 ORTHO05D005063 7.1e-50 203.0 698 26.8
SalBow6G1439 Salvia bowleyana HOM05D004165 ORTHO05D005063 7.1e-50 203.0 676 27.4
AUR62003622 Chenopodium quinoa HOM05D004165 ORTHO05D005063 7.9e-49 199.5 671 27.3
Sed0015867 Sechium edule HOM05D004165 ORTHO05D005063 7.9e-49 199.5 726 27.4
DCAR_016673 Daucus carota HOM05D004165 ORTHO05D005063 3.1e-45 187.6 687 26.2
EL10Ac6g15255 Beta vulgaris HOM05D004165 ORTHO05D005063 5.3e-45 186.8 684 27.0
SHI11781 Sapria himalayana HOM05D004165 ORTHO05D005063 1.7e-43 181.8 684 27.8
Dinv05635 Davidia involucrata HOM05D004165 ORTHO05D005063 4.2e-42 177.2 674 25.5
Glyma.05G185300 Glycine max HOM05D004165 ORTHO05D005063 1.2e-41 175.6 440 29.1
SEGI_28346 Sequoiadendron giganteum HOM05D004165 ORTHO05D005063 1.6e-41 175.3 645 26.2
SEGI_01323 Sequoiadendron giganteum HOM05D004165 ORTHO05D005063 2.5e-39 167.9 604 26.3
Oeu054941.1 Olea europaea HOM05D004165 ORTHO05D005063 7.6e-36 156.4 689 25.0
TAR629G2775 Trochodendron aralioides HOM05D004165 ORTHO05D005063 6.9e-29 133.3 621 23.3
Oeu054940.1 Olea europaea HOM05D004165 ORTHO05D005063 1.9e-26 125.2 542 26.2
Mapoly0066s0021 Marchantia polymorpha HOM05D004165 ORTHO05D005063 2.7e-25 121.3 497 26.0
Pp3c7_14700 Physcomitrium patens HOM05D004165 ORTHO05D005063 2.3e-24 118.2 436 25.5
Pp3c3_30110 Physcomitrium patens HOM05D004165 ORTHO05D005063 2.6e-23 114.8 742 21.6
Pp3c10_13600 Physcomitrium patens HOM05D004165 ORTHO05D005063 4.1e-21 107.5 752 23.9
Solyc04g051570.4 Solanum lycopersicum HOM05D004165 ORTHO05D005063 1.0e-19 102.8 158 35.4


User provided reference genes

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