Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0136450 Oryza sativa ssp. japonica HOM05D018962 ORTHO05D020946 4.3e-135 484.6 231 100.0
Os01g0137200 Oryza sativa ssp. japonica HOM05D018962 ORTHO05D020946 1.1e-114 416.8 227 88.5
Os01g0137400 Oryza sativa ssp. japonica HOM05D000072 ORTHO05D000026 2.4e-61 239.6 238 55.9
Zm00001eb335470 Zea mays HOM05D000260 ORTHO05D000318 6.8e-48 194.9 201 49.8
Zm00001eb335510 Zea mays HOM05D000072 ORTHO05D000026 5.8e-47 191.8 215 48.4
Zm00001eb124890 Zea mays HOM05D018962 ORTHO05D020946 4.2e-37 159.1 234 39.7
Os01g0136500 Oryza sativa ssp. japonica HOM05D018962 ORTHO05D296048 3.8e-30 136.0 202 39.1
Zm00001eb382960 Zea mays HOM05D018962 ORTHO05D020946 1.9e-21 107.1 139 40.3
Zm00001eb001610 Zea mays HOM05D018962 ORTHO05D020946 1.8e-19 100.5 136 39.7
Os01g0138400 Oryza sativa ssp. japonica HOM05D000072 ORTHO05D000026 6.0e-12 75.5 233 29.2
Os01g0137700 Oryza sativa ssp. japonica HOM05D026682 ORTHO05D020946 7.9e-12 75.1 238 31.9
MBI09_g25171_MAGBIO Magnolia biondii HOM05D000260 ORTHO05D000318 6.7e-11 72.0 233 30.0
Os01g0136700 Oryza sativa ssp. japonica HOM05D026682 ORTHO05D004405 3.3e-10 69.7 190 31.6
Lj5A152G71 Lonicera japonica HOM05D000260 ORTHO05D000318 4.3e-10 69.3 194 32.5
COL.COLO4_07249 Corchorus olitorius HOM05D000260 ORTHO05D000318 1.6e-09 67.4 212 28.8
Lj5C152G14 Lonicera japonica HOM05D000260 ORTHO05D000318 8.2e-09 65.1 190 31.1
Actinidia02665 Actinidia chinensis HOM05D000260 ORTHO05D000318 1.1e-08 64.7 234 27.4
Os01g0137282 Oryza sativa ssp. japonica HOM05D018962 ORTHO05D020946 6.9e-08 62.0 196 29.1
MBI09_g25174_MAGBIO Magnolia biondii HOM05D000072 ORTHO05D000026 2.6e-07 60.1 196 30.1
Sabra15G0040300 Salix brachista HOM05D000260 ORTHO05D000318 4.5e-07 59.3 212 28.3
Ciclev10018735m.g Citrus clementina HOM05D000260 ORTHO05D000318 1.0e-06 58.2 211 26.5
Cfa019743 Carpinus fangiana HOM05D000260 ORTHO05D004405 6.5e-06 55.5 224 27.7


User provided reference genes

Program Settings