Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0111700 Oryza sativa ssp. japonica HOM05D008294 ORTHO05D010468 4.1e-45 185.3 176 100.0
Zm00001eb334540 Zea mays HOM05D008294 ORTHO05D010468 2.6e-15 86.3 137 48.2
MBI10_g08546_MAGBIO Magnolia biondii HOM05D008294 ORTHO05D010468 1.5e-10 70.5 77 44.2
Gorai.008G058300 Gossypium raimondii HOM05D008294 ORTHO05D010468 9.6e-10 67.8 93 39.8
Cpa.g.sc604.2 Carica papaya HOM05D008294 ORTHO05D010468 1.3e-09 67.4 77 45.5
Thecc.04G121200 Theobroma cacao HOM05D008294 ORTHO05D010468 1.6e-09 67.0 77 44.2
GSVIVG01030864001 Vitis vinifera HOM05D008294 ORTHO05D010468 3.7e-09 65.9 92 39.1
HanXRQChr14g0439951 Helianthus annuus HOM05D008294 ORTHO05D010468 6.2e-09 65.1 86 38.4
Cc07_g08180 Coffea canephora HOM05D008294 ORTHO05D010468 1.4e-08 63.9 76 42.1
Manes.01G115600 Manihot esculenta HOM05D008294 ORTHO05D010468 1.4e-08 63.9 76 42.1
Lsat_1_v5_gn_2_81341 Lactuca sativa HOM05D008294 ORTHO05D010468 2.4e-08 63.2 89 43.8
Prupe.3G159000 Prunus persica HOM05D008294 ORTHO05D010468 3.1e-08 62.8 76 53.9
QL11p004113 Quercus lobata HOM05D008294 ORTHO05D010468 5.3e-08 62.0 76 42.1
Oeu054753.1 Olea europaea HOM05D008294 ORTHO05D010468 6.9e-08 61.6 76 40.8
Nn3g18213 Nelumbo nucifera HOM05D008294 ORTHO05D010468 9.0e-08 61.2 72 41.7
ClCG05G010930 Citrullus lanatus HOM05D008294 ORTHO05D010468 1.2e-07 60.8 75 41.3
Ciclev10013091m.g Citrus clementina HOM05D008294 ORTHO05D010468 1.2e-07 60.8 76 39.5
ECA238G3741 Erigeron canadensis HOM05D008294 ORTHO05D010468 1.2e-07 60.8 86 33.7
CsaV3_3G021650 Cucumis sativus L. HOM05D008294 ORTHO05D010468 2.0e-07 60.1 77 51.9
Atru.chr13.2285 Acer truncatum HOM05D008294 ORTHO05D010468 2.6e-07 59.7 39 59.0
MELO3C020292.2 Cucumis melo HOM05D008294 ORTHO05D010468 3.4e-07 59.3 75 40.0
SalBow7G4521 Salvia bowleyana HOM05D008294 ORTHO05D010468 3.4e-07 59.3 76 40.8
Eucgr.F02821 Eucalyptus grandis HOM05D008294 ORTHO05D010468 5.8e-07 58.5 77 40.3
DCAR_025875 Daucus carota HOM05D008294 ORTHO05D010468 7.6e-07 58.2 75 41.3
Peaxi162Scf00118g00016 Petunia axillaris HOM05D008294 ORTHO05D010468 9.9e-07 57.8 73 39.7
Sabra17G0107200 Salix brachista HOM05D008294 ORTHO05D010468 9.9e-07 57.8 76 38.2
Migut.H00270 Erythranthe guttata HOM05D008294 ORTHO05D010468 1.3e-06 57.4 32 71.9
Sed0009315 Sechium edule HOM05D008294 ORTHO05D010468 1.3e-06 57.4 73 41.1
MSTRG.3520 Avicennia marina HOM05D008294 ORTHO05D010468 1.7e-06 57.0 76 36.8
Potri.004G088300 Populus trichocarpa HOM05D008294 ORTHO05D010468 1.7e-06 57.0 79 35.4
Oeu063395.1 Olea europaea HOM05D002803 ORTHO05D003089 2.2e-06 56.6 33 69.7
PGSC0003DMG400030645 Solanum tuberosum HOM05D008294 ORTHO05D010468 2.2e-06 56.6 73 47.9
TAR017G0001 Trochodendron aralioides HOM05D008294 ORTHO05D010468 2.2e-06 56.6 73 39.7
Nitab4.5_0004399g0030 Nicotiana tabacum HOM05D008294 ORTHO05D010468 2.9e-06 56.2 73 38.4
Potri.017G128700 Populus trichocarpa HOM05D008294 ORTHO05D010468 2.9e-06 56.2 76 42.1
TPR.G9796 Trifolium pratense HOM05D002803 ORTHO05D003089 2.9e-06 56.2 32 68.8
AUR62023240 Chenopodium quinoa HOM05D008294 ORTHO05D010468 3.8e-06 55.8 37 56.8
Nitab4.5_0002248g0070 Nicotiana tabacum HOM05D008294 ORTHO05D010468 3.8e-06 55.8 73 38.4
Solyc02g091380.1 Solanum lycopersicum HOM05D008294 ORTHO05D010468 3.8e-06 55.8 73 43.8
Sopen02g036000 Solanum pennellii HOM05D008294 ORTHO05D010468 3.8e-06 55.8 73 49.3
Lalb_Chr17g0346181 Lupinus albus HOM05D008294 ORTHO05D010468 4.9e-06 55.5 76 34.2
Glyma.02G246900 Glycine max HOM05D008294 ORTHO05D010468 6.4e-06 55.1 71 40.8
Migut.L00469 Erythranthe guttata HOM05D008294 ORTHO05D010468 8.4e-06 54.7 73 41.1
Glyma.17G018400 Glycine max HOM05D002803 ORTHO05D003089 8.4e-06 54.7 30 73.3
Lalb_Chr02g0151801 Lupinus albus HOM05D002803 ORTHO05D003089 8.4e-06 54.7 30 66.7


User provided reference genes

Program Settings