Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 2.8e-114 415.6 258 100.0
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 4.1e-49 199.1 160 65.0
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 5.0e-39 165.6 164 54.9
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 6.5e-39 165.2 159 57.2
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 2.5e-38 163.3 162 55.6
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 2.5e-38 163.3 158 55.1
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 3.2e-38 162.9 159 57.2
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 2.1e-37 160.2 175 50.3
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.1e-37 160.2 175 50.3
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.1e-37 160.2 175 50.3
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 3.6e-37 159.5 159 56.6
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 4.6e-37 159.1 175 50.3
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 4.6e-37 159.1 186 51.1
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 1.8e-36 157.1 160 54.4
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 1.8e-36 157.1 186 48.4
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 2.3e-36 156.8 159 56.6
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 5.1e-36 155.6 163 53.4
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 5.1e-36 155.6 173 50.9
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 5.1e-36 155.6 162 53.1
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 5.1e-36 155.6 161 53.4
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 6.7e-36 155.2 160 53.8
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 6.7e-36 155.2 183 49.2
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 6.7e-36 155.2 175 49.1
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 6.7e-36 155.2 167 52.1
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 8.8e-36 154.8 175 49.7
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 8.8e-36 154.8 165 52.7
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 1.1e-35 154.5 160 53.8
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 1.5e-35 154.1 174 51.1
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.5e-35 154.1 161 53.4
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 2.0e-35 153.7 159 51.6
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 2.0e-35 153.7 174 50.6
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 2.0e-35 153.7 162 54.3
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 2.0e-35 153.7 175 50.9
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 2.5e-35 153.3 173 50.9
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 2.5e-35 153.3 159 55.3
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 2.5e-35 153.3 164 53.7
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 2.5e-35 153.3 164 53.7
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 3.3e-35 152.9 167 52.1
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 3.3e-35 152.9 159 55.3
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 3.3e-35 152.9 165 53.3
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 4.3e-35 152.5 164 53.7
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 5.7e-35 152.1 167 52.1
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 5.7e-35 152.1 167 51.5
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 5.7e-35 152.1 159 53.5
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 9.7e-35 151.4 167 52.1
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 9.7e-35 151.4 162 52.5
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 1.3e-34 151.0 159 54.1
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.7e-34 150.6 161 50.9
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 1.7e-34 150.6 162 51.2
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 2.2e-34 150.2 173 48.6
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 2.8e-34 149.8 162 54.3
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 2.8e-34 149.8 167 51.5
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 3.7e-34 149.4 163 52.1
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 4.8e-34 149.1 164 50.6
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 4.8e-34 149.1 163 51.5
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 6.3e-34 148.7 165 50.9
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 8.2e-34 148.3 162 50.6
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 1.1e-33 147.9 162 50.6
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 1.4e-33 147.5 158 53.2
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 1.4e-33 147.5 159 52.8
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 1.4e-33 147.5 184 48.4
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 1.8e-33 147.1 183 48.6
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 1.8e-33 147.1 167 50.9
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 1.8e-33 147.1 166 50.6
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 3.1e-33 146.4 167 51.5
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 3.1e-33 146.4 166 50.6
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 4.1e-33 146.0 165 51.5
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 5.3e-33 145.6 174 50.6
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 6.9e-33 145.2 169 51.5
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 6.9e-33 145.2 166 50.6
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 1.5e-32 144.1 169 50.9
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 2.6e-32 143.3 183 49.2
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 2.6e-32 143.3 163 50.9
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 3.4e-32 142.9 166 50.6
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 3.4e-32 142.9 141 54.6
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 4.5e-32 142.5 166 49.4
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 5.9e-32 142.1 169 50.9
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 5.9e-32 142.1 169 50.9
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 7.7e-32 141.7 169 50.3
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 7.7e-32 141.7 165 50.9
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 1.3e-31 141.0 159 47.8
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 2.2e-31 140.2 157 50.3
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 2.9e-31 139.8 165 51.5
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 3.8e-31 139.4 165 51.5
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 6.5e-31 138.7 165 50.9
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 8.5e-31 138.3 221 40.7
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 1.1e-30 137.9 160 48.1
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 5.5e-30 135.6 160 50.0
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 9.7e-27 124.8 204 41.7
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 1.8e-25 120.6 139 46.8
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 2.4e-25 120.2 180 42.2
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 3.1e-25 119.8 157 44.6
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.0e-23 114.8 98 56.1
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 5.5e-22 109.0 98 54.1
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 2.1e-21 107.1 177 42.4
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 4.0e-20 102.8 162 42.0
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 4.4e-19 99.4 161 37.3
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 8.5e-15 85.1 71 53.5
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 6.1e-13 79.0 88 54.5
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 1.0e-12 78.2 65 60.0
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 2.2e-10 70.5 90 50.0
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 8.3e-10 68.6 92 51.1
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 9.1e-09 65.1 89 48.3
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 8.5e-07 58.5 108 33.3


User provided reference genes

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