Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064890.1 Olea europaea HOM05D002560 ORTHO05D017207 2.8e-91 338.6 171 100.0
Migut.J00073 Erythranthe guttata HOM05D002560 ORTHO05D003782 1.2e-44 183.7 163 61.3
MSTRG.5523 Avicennia marina HOM05D002560 ORTHO05D003782 7.6e-44 181.0 162 59.9
Oeu057979.2 Olea europaea HOM05D002560 ORTHO05D003782 8.4e-43 177.6 162 59.3
SGA_v2.0_scaffold373G50169 Striga asiatica HOM05D002560 ORTHO05D003782 1.9e-42 176.4 146 63.7
SGA_v2.0_scaffold85G26659 Striga asiatica HOM05D002560 ORTHO05D003782 3.2e-42 175.6 146 63.0
MSTRG.18962 Avicennia marina HOM05D002560 ORTHO05D003782 1.0e-40 170.6 146 61.0
ClCG04G006550 Citrullus lanatus HOM05D002560 ORTHO05D003782 2.2e-35 152.9 160 52.5
Prupe.6G288100 Prunus persica HOM05D002560 ORTHO05D003782 1.1e-34 150.6 147 58.5
CsaV3_4G026950 Cucumis sativus L. HOM05D002560 ORTHO05D003782 7.1e-34 147.9 147 54.4
Cc06_g00590 Coffea canephora HOM05D002560 ORTHO05D003782 2.7e-33 146.0 149 57.7
FAN05G0561 Fragaria x ananassa HOM05D002560 ORTHO05D003782 6.0e-33 144.8 147 55.8
FAN09G2734 Fragaria x ananassa HOM05D002560 ORTHO05D003782 6.0e-33 144.8 147 55.8
FvH4_6g10400 Fragaria vesca HOM05D002560 ORTHO05D003782 7.8e-33 144.4 147 54.4
FAN14G2820 Fragaria x ananassa HOM05D002560 ORTHO05D003782 7.8e-33 144.4 147 54.4
TWI53G1929 Tripterygium wilfordii HOM05D002560 ORTHO05D003782 7.8e-33 144.4 148 56.1
MD12G1183600 Malus domestica HOM05D002560 ORTHO05D003782 1.0e-32 144.1 147 56.5
TWI77G0423 Tripterygium wilfordii HOM05D002560 ORTHO05D003782 1.0e-32 144.1 148 56.8
QL07p033277 Quercus lobata HOM05D002560 ORTHO05D003782 6.6e-32 141.4 149 52.3
Manes.08G174400 Manihot esculenta HOM05D002560 ORTHO05D003782 1.1e-31 140.6 147 54.4
GSVIVG01030232001 Vitis vinifera HOM05D002560 ORTHO05D003782 1.9e-31 139.8 146 56.2
Gohir.D10G118500 Gossypium hirsutum HOM05D002560 ORTHO05D003782 2.5e-31 139.4 148 52.0
Manes.09G114600 Manihot esculenta HOM05D002560 ORTHO05D003782 2.5e-31 139.4 147 57.1
CAN.G1189.1 Capsicum annuum HOM05D002560 ORTHO05D003782 3.3e-31 139.0 154 54.5
Dinv35441 Davidia involucrata HOM05D002560 ORTHO05D003782 3.3e-31 139.0 145 53.8
Gorai.011G130300 Gossypium raimondii HOM05D002560 ORTHO05D003782 3.3e-31 139.0 148 52.0
Nn2g11069 Nelumbo nucifera HOM05D002560 ORTHO05D003782 3.3e-31 139.0 146 52.7
CSS0041781 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 4.3e-31 138.7 146 52.1
Gohir.A10G147600 Gossypium hirsutum HOM05D002560 ORTHO05D003782 1.3e-30 137.1 148 51.4
MD04G1169600 Malus domestica HOM05D002560 ORTHO05D003782 2.1e-30 136.3 145 53.8
Sed0022812 Sechium edule HOM05D002560 ORTHO05D003782 3.6e-30 135.6 147 52.4
PGR004G0247 Punica granatum HOM05D002560 ORTHO05D003782 4.8e-30 135.2 147 53.7
Duzib268G0573 Durio zibethinus HOM05D002560 ORTHO05D003782 6.2e-30 134.8 148 52.7
Nn2g13307 Nelumbo nucifera HOM05D002560 ORTHO05D003782 6.2e-30 134.8 146 54.1
CSS0020454 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 8.1e-30 134.4 150 50.7
Dinv25295 Davidia involucrata HOM05D002560 ORTHO05D003782 1.1e-29 134.0 147 55.8
Solyc09g014780.3 Solanum lycopersicum HOM05D002560 ORTHO05D003782 1.1e-29 134.0 108 61.1
Sopen09g007660 Solanum pennellii HOM05D002560 ORTHO05D003782 1.1e-29 134.0 108 61.1
Gohir.D02G005900 Gossypium hirsutum HOM05D002560 ORTHO05D003782 2.4e-29 132.9 148 51.4
PGSC0003DMG400017035 Solanum tuberosum HOM05D002560 ORTHO05D003782 2.4e-29 132.9 108 60.2
unitig_27.g24878 Utricularia gibba HOM05D002560 ORTHO05D003782 3.1e-29 132.5 146 50.0
CANSAT35G0319 Cannabis sativa HOM05D002560 ORTHO05D003782 4.0e-29 132.1 144 52.8
FAN02G0292 Fragaria x ananassa HOM05D002560 ORTHO05D003782 4.0e-29 132.1 169 48.5
FAN05G5301 Fragaria x ananassa HOM05D002560 ORTHO05D003782 4.0e-29 132.1 169 48.5
Thecc.04G156800 Theobroma cacao HOM05D002560 ORTHO05D003782 4.0e-29 132.1 149 49.7
Actinidia11535 Actinidia chinensis HOM05D002560 ORTHO05D003782 5.3e-29 131.7 148 52.0
Gorai.005G006600 Gossypium raimondii HOM05D002560 ORTHO05D003782 5.3e-29 131.7 147 49.7
Ciclev10010918m.g Citrus clementina HOM05D002560 ORTHO05D003782 6.9e-29 131.3 151 49.7
Nitab4.5_0004394g0020 Nicotiana tabacum HOM05D002560 ORTHO05D003782 9.0e-29 131.0 75 76.0
CiPaw.09G217200 Carya illinoinensis HOM05D002560 ORTHO05D003782 1.2e-28 130.6 145 51.7
CiPaw.10G163200 Carya illinoinensis HOM05D002560 ORTHO05D003782 1.2e-28 130.6 149 51.0
Duzib212G0261 Durio zibethinus HOM05D002560 ORTHO05D003782 1.5e-28 130.2 149 49.7
Gohir.A02G005400 Gossypium hirsutum HOM05D002560 ORTHO05D003782 2.0e-28 129.8 148 50.7
Peaxi162Scf00744g00021 Petunia axillaris HOM05D002560 ORTHO05D003782 2.0e-28 129.8 75 74.7
Actinidia29053 Actinidia chinensis HOM05D002560 ORTHO05D003782 2.6e-28 129.4 148 52.0
Hma1.2p1_0174F.1_g077050 Hydrangea macrophylla HOM05D002560 ORTHO05D003782 2.6e-28 129.4 150 50.0
Hund03758 Selenicereus undatus HOM05D002560 ORTHO05D003782 2.6e-28 129.4 146 50.7
Cfa017080 Carpinus fangiana HOM05D002560 ORTHO05D003782 3.4e-28 129.0 145 53.1
Haze_21118 Corylus avellana HOM05D002560 ORTHO05D003782 3.4e-28 129.0 145 53.1
Glyma.09G278500 Glycine max HOM05D002560 ORTHO05D003782 1.3e-27 127.1 89 68.5
RcHm_v2.0_Chr3g0461291 Rosa chinensis HOM05D002560 ORTHO05D003782 1.3e-27 127.1 76 73.7
Nitab4.5_0000047g0010 Nicotiana tabacum HOM05D002560 ORTHO05D003782 2.9e-27 125.9 159 47.2
MBI15_g10510_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D003782 3.8e-27 125.6 146 50.0
TAR369G0139 Trochodendron aralioides HOM05D002560 ORTHO05D003782 4.9e-27 125.2 88 68.2
Duzib151G0314 Durio zibethinus HOM05D002560 ORTHO05D003782 6.4e-27 124.8 150 48.0
Lj1g0007869 Lotus japonicus HOM05D002560 ORTHO05D003782 6.4e-27 124.8 83 68.7
Nitab4.5_0002009g0040 Nicotiana tabacum HOM05D002560 ORTHO05D003782 1.1e-26 124.0 93 65.6
arahy.Tifrunner.gnm1.ann1.7K02KP Arachis hypogaea HOM05D002560 ORTHO05D003782 1.9e-26 123.2 88 67.0
DCAR_015351 Daucus carota HOM05D002560 ORTHO05D003782 1.9e-26 123.2 145 46.2
VMungo1383G2495 Vigna mungo HOM05D002560 ORTHO05D003782 4.2e-26 122.1 154 47.4
Sc02g0000740 Simmondsia chinensis HOM05D002560 ORTHO05D003782 5.4e-26 121.7 151 43.0
Actinidia20781 Actinidia chinensis HOM05D002560 ORTHO05D003782 7.1e-26 121.3 83 66.3
HanXRQChr15g0463501 Helianthus annuus HOM05D002560 ORTHO05D003782 7.1e-26 121.3 77 70.1
Lalb_Chr19g0124111 Lupinus albus HOM05D002560 ORTHO05D003782 7.1e-26 121.3 147 49.0
ECA247G0799 Erigeron canadensis HOM05D002560 ORTHO05D003782 9.3e-26 120.9 80 67.5
PSO170G0779 Papaver somniferum HOM05D002560 ORTHO05D003782 9.3e-26 120.9 77 70.1
Ah.08g209810 Amaranthus hybridus HOM05D002560 ORTHO05D003782 1.2e-25 120.6 153 45.1
CDE12G0125 Ceratophyllum demersum HOM05D002560 ORTHO05D003782 1.2e-25 120.6 128 49.2
ATR0681G310 Amborella trichopoda HOM05D002560 ORTHO05D003782 1.6e-25 120.2 89 65.2
Phvul.008G087800 Phaseolus vulgaris HOM05D002560 ORTHO05D003782 1.6e-25 120.2 154 47.4
CDE04G1751 Ceratophyllum demersum HOM05D002560 ORTHO05D003782 2.1e-25 119.8 145 45.5
arahy.Tifrunner.gnm1.ann1.6VEX49 Arachis hypogaea HOM05D002560 ORTHO05D003782 4.6e-25 118.6 161 44.7
arahy.Tifrunner.gnm1.ann1.IZK0HU Arachis hypogaea HOM05D002560 ORTHO05D003782 4.6e-25 118.6 152 49.3
arahy.Tifrunner.gnm1.ann1.PPI0JG Arachis hypogaea HOM05D002560 ORTHO05D003782 4.6e-25 118.6 152 49.3
PSO017G3901 Papaver somniferum HOM05D002560 ORTHO05D003782 6.0e-25 118.2 155 47.1
arahy.Tifrunner.gnm1.ann1.TV2NT7 Arachis hypogaea HOM05D002560 ORTHO05D003782 7.9e-25 117.9 156 43.6
TPR.G35291 Trifolium pratense HOM05D002560 ORTHO05D003782 7.9e-25 117.9 124 50.0
Aqoxy4G02161 Aquilegia oxysepala HOM05D002560 ORTHO05D003782 1.0e-24 117.5 76 65.8
Lsat_1_v5_gn_9_38100 Lactuca sativa HOM05D002560 ORTHO05D003782 1.0e-24 117.5 119 52.9
THA.LOC104816173 Tarenaya hassleriana HOM05D002560 ORTHO05D003782 1.3e-24 117.1 88 63.6
HPP92_015583 Vanilla planifolia HOM05D002560 ORTHO05D003782 1.3e-24 117.1 124 46.8
Psat3g122440 Pisum sativum HOM05D002560 ORTHO05D003782 1.8e-24 116.7 99 56.6
HanXRQChr10g0288601 Helianthus annuus HOM05D002560 ORTHO05D003782 3.0e-24 115.9 123 51.2
Potri.006G106600 Populus trichocarpa HOM05D002560 ORTHO05D003782 3.0e-24 115.9 72 70.8
THA.LOC104823313 Tarenaya hassleriana HOM05D002560 ORTHO05D003782 3.9e-24 115.5 75 69.3
Medtr7g072330 Medicago truncatula HOM05D002560 ORTHO05D003782 5.1e-24 115.2 106 54.7
Rhsim05G0228200 Rhododendron simsii HOM05D002560 ORTHO05D003782 5.1e-24 115.2 178 41.6
Eucgr.K01267 Eucalyptus grandis HOM05D002560 ORTHO05D003782 6.7e-24 114.8 114 53.5
Sabra04G0150100 Salix brachista HOM05D002560 ORTHO05D003782 6.7e-24 114.8 162 42.6
THA.LOC104827066 Tarenaya hassleriana HOM05D002560 ORTHO05D003782 6.7e-24 114.8 75 68.0
AUR62026368 Chenopodium quinoa HOM05D002560 ORTHO05D003782 1.5e-23 113.6 122 50.0
Lalb_Chr01g0023601 Lupinus albus HOM05D002560 ORTHO05D003782 1.5e-23 113.6 134 48.5
SEGI_27011 Sequoiadendron giganteum HOM05D002560 ORTHO05D003782 1.9e-23 113.2 93 57.0
Potri.016G132000 Populus trichocarpa HOM05D002560 ORTHO05D003782 4.3e-23 112.1 76 67.1
EL10Ac7g17038 Beta vulgaris HOM05D002560 ORTHO05D003782 9.6e-23 110.9 149 44.3
Mapoly0002s0262 Marchantia polymorpha HOM05D002560 ORTHO05D003782 2.1e-22 109.8 79 62.0
AL3G19840 Arabidopsis lyrata HOM05D002560 ORTHO05D003782 2.8e-22 109.4 150 44.7
AT3G08850 Arabidopsis thaliana HOM05D002560 ORTHO05D003782 6.2e-22 108.2 150 44.7
Peaxi162Scf00595g00112 Petunia axillaris HOM05D002560 ORTHO05D003782 1.1e-21 107.5 79 69.6
Zm00001eb404940 Zea mays HOM05D002560 ORTHO05D003782 2.4e-21 106.3 87 58.6
Aa31LG5G18820 Aethionema arabicum HOM05D002560 ORTHO05D003782 3.1e-21 105.9 151 45.7
Ah.15g090290 Amaranthus hybridus HOM05D002560 ORTHO05D003782 6.9e-21 104.8 163 38.0
CARHR083160 Cardamine hirsuta HOM05D002560 ORTHO05D003782 1.2e-20 104.0 150 46.7
Sabra06G0083000 Salix brachista HOM05D002560 ORTHO05D003782 2.0e-20 103.2 116 46.6
Carub.0003s0796 Capsella rubella HOM05D002560 ORTHO05D003782 5.8e-20 101.7 148 45.3
Zm00001eb093980 Zea mays HOM05D002560 ORTHO05D003782 5.8e-20 101.7 118 45.8
Thhalv10019904m.g Eutrema salsugineum HOM05D002560 ORTHO05D003782 1.0e-19 100.9 148 43.9
Sp3g07250 Schrenkiella parvula HOM05D002560 ORTHO05D003782 2.2e-19 99.8 149 45.6
Sp6g41030 Schrenkiella parvula HOM05D002560 ORTHO05D003782 4.9e-19 98.6 90 56.7
Aa31LG1G23430 Aethionema arabicum HOM05D002560 ORTHO05D003782 4.2e-18 95.5 148 41.9
BcaC01g04199 Brassica carinata HOM05D002560 ORTHO05D003782 4.2e-18 95.5 148 46.6
A05p39970 Brassica napus HOM05D002560 ORTHO05D003782 4.2e-18 95.5 152 42.8
BolC3t16666H Brassica oleracea HOM05D002560 ORTHO05D003782 4.2e-18 95.5 148 46.6
AT5G01770 Arabidopsis thaliana HOM05D002560 ORTHO05D003782 5.5e-18 95.1 145 43.4
C03p43970 Brassica napus HOM05D005896 ORTHO05D007250 7.1e-18 94.7 148 46.6
TPR.G35288 Trifolium pratense HOM05D002560 ORTHO05D003782 1.6e-17 93.6 110 46.4
BolC5t34554H Brassica oleracea HOM05D002560 ORTHO05D003782 2.1e-17 93.2 152 41.4
Thhalv10012449m.g Eutrema salsugineum HOM05D002560 ORTHO05D003782 2.1e-17 93.2 150 41.3
BcaC05g29622 Brassica carinata HOM05D002560 ORTHO05D003782 2.7e-17 92.8 152 41.4
C05p59010 Brassica napus HOM05D002560 ORTHO05D003782 2.7e-17 92.8 152 41.4
MELO3C027185.2 Cucumis melo HOM05D002560 ORTHO05D017207 4.6e-17 92.0 113 46.9
SMO116G0458 Selaginella moellendorffii HOM05D002560 ORTHO05D003782 4.6e-17 92.0 69 56.5
BcaC02g08135 Brassica carinata HOM05D002560 ORTHO05D013255 6.0e-17 91.7 76 59.2
Eucgr.K01257 Eucalyptus grandis HOM05D002560 ORTHO05D003782 7.9e-17 91.3 92 48.9
Atru.chr8.2364 Acer truncatum HOM05D002560 ORTHO05D003782 1.3e-16 90.5 98 51.0
BcaB04g18570 Brassica carinata HOM05D002560 ORTHO05D003782 2.3e-16 89.7 146 44.5
BraA03t12804Z Brassica rapa HOM05D002560 ORTHO05D003782 2.3e-16 89.7 146 44.5
A03p36350 Brassica napus HOM05D005896 ORTHO05D007250 3.9e-16 89.0 146 44.5
BolC4t27326H Brassica oleracea HOM05D002560 ORTHO05D013255 3.9e-16 89.0 75 58.7
AL6G10260 Arabidopsis lyrata HOM05D002560 ORTHO05D003782 8.7e-16 87.8 148 41.2
Pp3c9_4770 Physcomitrium patens HOM05D002560 ORTHO05D003782 3.3e-15 85.9 147 35.4
vmacro08922 Vaccinium macrocarpon HOM05D002560 ORTHO05D003782 3.3e-15 85.9 245 30.2
Cpa.g.c37981 Carica papaya HOM05D002560 ORTHO05D017207 7.4e-15 84.7 115 49.6
Solyc10g076260.2 Solanum lycopersicum HOM05D002560 ORTHO05D003782 7.4e-15 84.7 134 38.1
Os12g0110000 Oryza sativa ssp. japonica HOM05D002560 ORTHO05D003782 1.6e-14 83.6 51 70.6
Sopen10g027880 Solanum pennellii HOM05D002560 ORTHO05D013255 2.1e-14 83.2 119 39.5
Cre08.g371957 Chlamydomonas reinhardtii HOM05D002560 ORTHO05D003782 3.7e-14 82.4 74 48.6
SMO334G0080 Selaginella moellendorffii HOM05D002560 ORTHO05D003782 6.2e-14 81.6 79 51.9
PRCOL_00002325 Prasinoderma coloniale HOM05D002560 ORTHO05D003782 8.2e-14 81.3 77 49.4
Rhsim04G0123300 Rhododendron simsii HOM05D002560 ORTHO05D003782 1.1e-13 80.9 136 39.0
Actinidia32555 Actinidia chinensis HOM05D002560 ORTHO05D017207 4.1e-13 79.0 63 54.0
Gohir.A11G330100 Gossypium hirsutum HOM05D002560 ORTHO05D017207 9.0e-13 77.8 117 44.4
AagrBONN_evm.TU.Sc2ySwM_228.3097 Anthoceros agrestis HOM05D002560 ORTHO05D003782 1.2e-12 77.4 69 53.6
Pp3c25_7220 Physcomitrium patens HOM05D002560 ORTHO05D003782 2.0e-12 76.6 69 50.7
COL.COLO4_08634 Corchorus olitorius HOM05D002560 ORTHO05D003782 2.6e-12 76.3 70 54.3
MCO07G246 Micromonas commoda HOM05D002560 ORTHO05D003782 3.4e-12 75.9 71 45.1
Pp3c15_3360 Physcomitrium patens HOM05D002560 ORTHO05D003782 5.8e-12 75.1 108 38.0
CBR_g54868 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-11 74.3 87 41.4
Lj3C943G3 Lonicera japonica HOM05D002560 ORTHO05D003782 1.0e-11 74.3 113 44.2
AUR62006388 Chenopodium quinoa HOM05D002560 ORTHO05D003782 3.2e-10 69.3 57 54.4
vmacro20347 Vaccinium macrocarpon HOM05D002560 ORTHO05D017207 5.5e-10 68.6 113 45.1
DCAR_023987 Daucus carota HOM05D002560 ORTHO05D017207 2.1e-09 66.6 64 51.6
Glyma.18G210300 Glycine max HOM05D002560 ORTHO05D003782 3.9e-08 62.4 38 73.7
DCAR_023988 Daucus carota HOM05D002560 ORTHO05D003782 8.7e-08 61.2 38 71.1
Ca_07738_v3 Cicer arietinum L. HOM05D002560 ORTHO05D003782 1.1e-07 60.8 50 60.0
Glyma.10G121548 Glycine max HOM05D002560 ORTHO05D013255 1.5e-07 60.5 50 60.0
Haze_21119 Corylus avellana HOM05D002560 ORTHO05D003782 1.9e-07 60.1 34 79.4
Gohir.A10G199133 Gossypium hirsutum HOM05D002560 ORTHO05D013255 2.5e-07 59.7 35 74.3
Sc20g0006790 Simmondsia chinensis HOM05D002560 ORTHO05D003782 2.5e-07 59.7 50 60.0
Lsat_1_v5_gn_2_30201 Lactuca sativa HOM05D002560 ORTHO05D013255 3.3e-07 59.3 35 74.3
Gohir.A13G130801 Gossypium hirsutum HOM05D002560 ORTHO05D013255 4.3e-07 58.9 35 71.4
Lj2C63G9 Lonicera japonica HOM05D002560 ORTHO05D003782 7.4e-07 58.2 111 36.0
Gohir.A13G144501 Gossypium hirsutum HOM05D002560 ORTHO05D013255 1.3e-06 57.4 35 71.4
SGA_v2.0_scaffold204G41670 Striga asiatica HOM05D002560 ORTHO05D017207 1.6e-06 57.0 37 62.2
Lsat_1_v5_gn_7_100020 Lactuca sativa HOM05D002560 ORTHO05D013255 2.2e-06 56.6 34 73.5
Haze_26280 Corylus avellana HOM05D002560 ORTHO05D003782 2.8e-06 56.2 39 56.4
Os05g0307400 Oryza sativa ssp. japonica HOM05D000611 ORTHO05D007148 2.8e-06 56.2 34 73.5
PGSC0003DMG400011867 Solanum tuberosum HOM05D002560 ORTHO05D013255 3.7e-06 55.8 46 50.0
Lsat_1_v5_gn_6_47040 Lactuca sativa HOM05D002560 ORTHO05D013255 4.8e-06 55.5 34 73.5
Phvul.008G088000 Phaseolus vulgaris HOM05D002560 ORTHO05D017207 8.2e-06 54.7 74 40.5


User provided reference genes

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