Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064771.1 Olea europaea HOM05D002042 ORTHO05D288566 1.1e-34 149.4 74 100.0
Oeu034444.1 Olea europaea HOM05D002042 ORTHO05D003928 4.2e-15 84.3 89 55.1
Haze_01455 Corylus avellana HOM05D002042 ORTHO05D003928 1.2e-14 82.8 57 68.4
TWI15G0647 Tripterygium wilfordii HOM05D002042 ORTHO05D003928 1.2e-14 82.8 57 70.2
Oeu064774.1 Olea europaea HOM05D002042 ORTHO05D003928 2.7e-14 81.6 85 57.6
CSS0009301 Camellia sinensis var. sinensis HOM05D002042 ORTHO05D003928 4.8e-11 70.9 90 45.6
CAN.G540.7 Capsicum annuum HOM05D002042 ORTHO05D003928 1.8e-10 68.9 90 44.4
Lj6C107G6 Lonicera japonica HOM05D002042 ORTHO05D003928 2.4e-10 68.6 100 41.0
Lalb_Chr24g0396751 Lupinus albus HOM05D002042 ORTHO05D003928 3.1e-10 68.2 90 45.6
SGA_v2.0_scaffold17G08161 Striga asiatica HOM05D002042 ORTHO05D003928 4.0e-10 67.8 90 45.6
Ciclev10021094m.g Citrus clementina HOM05D002042 ORTHO05D003928 5.3e-10 67.4 90 43.3
MSTRG.4285 Avicennia marina HOM05D002042 ORTHO05D003928 6.9e-10 67.0 103 39.8
CANSAT78G0555 Cannabis sativa HOM05D002042 ORTHO05D003928 6.9e-10 67.0 90 44.4
VMungo1080G1782 Vigna mungo HOM05D002042 ORTHO05D003928 6.9e-10 67.0 103 40.8
HanXRQChr13g0419841 Helianthus annuus HOM05D002042 ORTHO05D003928 9.0e-10 66.6 90 44.4
QL10p050921 Quercus lobata HOM05D002042 ORTHO05D003928 9.0e-10 66.6 90 43.3
CDE08G1381 Ceratophyllum demersum HOM05D002042 ORTHO05D003928 1.2e-09 66.2 90 44.4
ClCG07G011760 Citrullus lanatus HOM05D002042 ORTHO05D003928 1.2e-09 66.2 90 43.3
COL.COLO4_08223 Corchorus olitorius HOM05D002042 ORTHO05D003928 1.2e-09 66.2 90 44.4
MELO3C017798.2 Cucumis melo HOM05D002042 ORTHO05D003928 1.2e-09 66.2 90 43.3
Gohir.A02G011300 Gossypium hirsutum HOM05D002042 ORTHO05D003928 1.2e-09 66.2 90 43.3
Lj3g0017638 Lotus japonicus HOM05D002042 ORTHO05D003928 1.5e-09 65.9 90 43.3
Manes.04G038500 Manihot esculenta HOM05D002042 ORTHO05D003928 1.5e-09 65.9 86 46.5
Phvul.005G154100 Phaseolus vulgaris HOM05D002042 ORTHO05D003928 1.5e-09 65.9 103 40.8
Prupe.1G198300 Prunus persica HOM05D002042 ORTHO05D003928 1.5e-09 65.9 90 45.6
unitig_92.g28203 Utricularia gibba HOM05D002042 ORTHO05D003928 1.5e-09 65.9 90 44.4
MD04G1045200 Malus domestica HOM05D002042 ORTHO05D003928 2.0e-09 65.5 90 43.3
Hund12404 Selenicereus undatus HOM05D002042 ORTHO05D003928 2.0e-09 65.5 103 38.8
GSVIVG01010845001 Vitis vinifera HOM05D002042 ORTHO05D003928 2.0e-09 65.5 90 43.3
Atru.chr4.1264 Acer truncatum HOM05D002042 ORTHO05D003928 2.6e-09 65.1 90 43.3
Oeu020495.1 Olea europaea HOM05D002042 ORTHO05D003928 2.6e-09 65.1 90 43.3
Peaxi162Scf00180g00311 Petunia axillaris HOM05D002042 ORTHO05D003928 2.6e-09 65.1 86 44.2
Phvul.011G053100 Phaseolus vulgaris HOM05D002042 ORTHO05D003928 2.6e-09 65.1 103 38.8
Solyc06g053310.3 Solanum lycopersicum HOM05D002042 ORTHO05D003928 2.6e-09 65.1 90 43.3
Sopen06g018370 Solanum pennellii HOM05D002042 ORTHO05D003928 2.6e-09 65.1 90 43.3
Actinidia11293 Actinidia chinensis HOM05D002042 ORTHO05D003928 3.4e-09 64.7 90 43.3
Cpa.g.sc9.318 Carica papaya HOM05D002042 ORTHO05D003928 3.4e-09 64.7 90 44.4
HanXRQChr03g0089271 Helianthus annuus HOM05D002042 ORTHO05D003928 3.4e-09 64.7 90 43.3
Nitab4.5_0001586g0150 Nicotiana tabacum HOM05D002042 ORTHO05D003928 3.4e-09 64.7 90 43.3
Nitab4.5_0006064g0030 Nicotiana tabacum HOM05D002042 ORTHO05D003928 3.4e-09 64.7 90 43.3
PGR083G0446 Punica granatum HOM05D002042 ORTHO05D003928 3.4e-09 64.7 103 38.8
Rhsim02G0082500 Rhododendron simsii HOM05D002042 ORTHO05D003928 3.4e-09 64.7 90 43.3
Aqoxy2G04133 Aquilegia oxysepala HOM05D002042 ORTHO05D003928 4.5e-09 64.3 90 41.1
CiPaw.01G096000 Carya illinoinensis HOM05D002042 ORTHO05D003928 4.5e-09 64.3 90 43.3
Dinv05082 Davidia involucrata HOM05D002042 ORTHO05D003928 4.5e-09 64.3 90 42.2
Glyma.15G028900 Glycine max HOM05D002042 ORTHO05D003928 4.5e-09 64.3 90 43.3
Hma1.2p1_1466F.1_g285440 Hydrangea macrophylla HOM05D002042 ORTHO05D003928 4.5e-09 64.3 90 42.2
Lj3g0013678 Lotus japonicus HOM05D002042 ORTHO05D003928 4.5e-09 64.3 90 43.3
SalBow3G0044 Salvia bowleyana HOM05D002042 ORTHO05D003928 4.5e-09 64.3 90 44.4
Sed0004462 Sechium edule HOM05D002042 ORTHO05D003928 4.5e-09 64.3 90 42.2
Thecc.04G174400 Theobroma cacao HOM05D002042 ORTHO05D003928 4.5e-09 64.3 90 42.2
Ca_01249_v3 Cicer arietinum L. HOM05D002042 ORTHO05D003928 5.8e-09 63.9 90 42.2
CsaV3_4G002450 Cucumis sativus L. HOM05D002042 ORTHO05D003928 5.8e-09 63.9 84 45.2
ECA240G1523 Erigeron canadensis HOM05D002042 ORTHO05D003928 5.8e-09 63.9 90 42.2
MBI11_g16044_MAGBIO Magnolia biondii HOM05D002042 ORTHO05D003928 5.8e-09 63.9 90 44.4
Oeu024475.1 Olea europaea HOM05D002042 ORTHO05D003928 5.8e-09 63.9 90 42.2
TAR362G0599 Trochodendron aralioides HOM05D002042 ORTHO05D003928 5.8e-09 63.9 90 44.4
CiPaw.02G051900 Carya illinoinensis HOM05D002042 ORTHO05D003928 7.6e-09 63.5 103 38.8
AUR62002351 Chenopodium quinoa HOM05D002042 ORTHO05D003928 7.6e-09 63.5 103 39.8
Duzib212G0238 Durio zibethinus HOM05D002042 ORTHO05D003928 7.6e-09 63.5 90 42.2
Glyma.13G345400 Glycine max HOM05D002042 ORTHO05D003928 7.6e-09 63.5 90 43.3
Gohir.D02G012100 Gossypium hirsutum HOM05D002042 ORTHO05D003928 7.6e-09 63.5 86 43.0
Gorai.005G015500 Gossypium raimondii HOM05D002042 ORTHO05D003928 7.6e-09 63.5 86 43.0
Cc03_g12120 Coffea canephora HOM05D002042 ORTHO05D003928 1.0e-08 63.2 90 43.3
Psat7g209200 Pisum sativum HOM05D002042 ORTHO05D003928 1.0e-08 63.2 90 41.1
Potri.007G131300 Populus trichocarpa HOM05D002042 ORTHO05D003928 1.0e-08 63.2 90 43.3
TAR633G2249 Trochodendron aralioides HOM05D002042 ORTHO05D003928 1.0e-08 63.2 90 42.2
Medtr2g099090 Medicago truncatula HOM05D002042 ORTHO05D003928 1.3e-08 62.8 90 43.3
Nn1g09581 Nelumbo nucifera HOM05D002042 ORTHO05D003928 1.3e-08 62.8 90 42.2
Sed0019662 Sechium edule HOM05D002042 ORTHO05D003928 1.3e-08 62.8 90 41.1
Lj3A34G38 Lonicera japonica HOM05D002042 ORTHO05D003928 1.7e-08 62.4 86 43.0
Manes.11G125200 Manihot esculenta HOM05D002042 ORTHO05D003928 1.7e-08 62.4 86 43.0
Ah.13g073770 Amaranthus hybridus HOM05D002042 ORTHO05D003928 2.2e-08 62.0 90 42.2
BcaC01g05957 Brassica carinata HOM05D002042 ORTHO05D003928 2.2e-08 62.0 90 41.1
A03p17490 Brassica napus HOM05D002042 ORTHO05D003928 2.2e-08 62.0 90 41.1
C03p20660 Brassica napus HOM05D002042 ORTHO05D003928 2.2e-08 62.0 90 41.1
BolC3t14458H Brassica oleracea HOM05D002042 ORTHO05D003928 2.2e-08 62.0 90 41.1
BraA03t11021Z Brassica rapa HOM05D002042 ORTHO05D003928 2.2e-08 62.0 90 41.1
Ca_20801_v3 Cicer arietinum L. HOM05D002042 ORTHO05D003928 2.2e-08 62.0 90 40.0
TPR.G18862 Trifolium pratense HOM05D002042 ORTHO05D003928 2.2e-08 62.0 86 44.2
Glyma.12G050800 Glycine max HOM05D002042 ORTHO05D003928 2.9e-08 61.6 90 42.2
VMungo1127G1149 Vigna mungo HOM05D002042 ORTHO05D003928 2.9e-08 61.6 90 41.1
Aa31LG5G5600 Aethionema arabicum HOM05D002042 ORTHO05D003928 3.8e-08 61.2 90 41.1
BcaB01g04048 Brassica carinata HOM05D002042 ORTHO05D003928 3.8e-08 61.2 90 40.0
AUR62023835 Chenopodium quinoa HOM05D002042 ORTHO05D003928 3.8e-08 61.2 103 38.8
Medtr4g068100 Medicago truncatula HOM05D002042 ORTHO05D003928 3.8e-08 61.2 90 40.0
HPP92_009005 Vanilla planifolia HOM05D002042 ORTHO05D003928 3.8e-08 61.2 90 41.1
Migut.G01317 Erythranthe guttata HOM05D002042 ORTHO05D003928 4.9e-08 60.8 90 41.1
RcHm_v2.0_Chr5g0074861 Rosa chinensis HOM05D002042 ORTHO05D003928 6.5e-08 60.5 90 42.2
AL4G26590 Arabidopsis lyrata HOM05D002042 ORTHO05D003928 8.4e-08 60.1 90 40.0
Carub.0004s1267 Capsella rubella HOM05D002042 ORTHO05D003928 8.4e-08 60.1 90 40.0
Duzib151G0367 Durio zibethinus HOM05D002042 ORTHO05D003928 8.4e-08 60.1 90 41.1
Lsat_1_v5_gn_3_109941 Lactuca sativa HOM05D002042 ORTHO05D003928 8.4e-08 60.1 86 41.9
Lalb_Chr07g0192821 Lupinus albus HOM05D002042 ORTHO05D003928 8.4e-08 60.1 90 41.1
A05p03760 Brassica napus HOM05D002300 ORTHO05D002340 1.1e-07 59.7 103 38.8
BraA05t19363Z Brassica rapa HOM05D002042 ORTHO05D003928 1.1e-07 59.7 103 38.8
CARHR138520 Cardamine hirsuta HOM05D002042 ORTHO05D003928 1.1e-07 59.7 103 38.8
Thhalv10016918m.g Eutrema salsugineum HOM05D002042 ORTHO05D003928 1.1e-07 59.7 90 38.9
PSO017G6715 Papaver somniferum HOM05D002042 ORTHO05D003928 1.1e-07 59.7 90 41.1
Sp4g13830 Schrenkiella parvula HOM05D002042 ORTHO05D003928 1.1e-07 59.7 90 38.9
BcaB02g10385 Brassica carinata HOM05D006190 ORTHO05D008260 1.4e-07 59.3 90 38.9
BcaC02g07179 Brassica carinata HOM05D002042 ORTHO05D003928 1.4e-07 59.3 103 37.9
C04p70420 Brassica napus HOM05D002042 ORTHO05D003928 1.4e-07 59.3 103 37.9
BolC4t28546H Brassica oleracea HOM05D002042 ORTHO05D003928 1.4e-07 59.3 103 37.9
FvH4_3g41770 Fragaria vesca HOM05D002042 ORTHO05D003928 1.4e-07 59.3 103 36.9
FAN16G3545 Fragaria x ananassa HOM05D002042 ORTHO05D003928 1.4e-07 59.3 103 36.9
FAN21G1842 Fragaria x ananassa HOM05D002042 ORTHO05D003928 1.4e-07 59.3 103 36.9
FAN25G1970 Fragaria x ananassa HOM05D002042 ORTHO05D003928 1.4e-07 59.3 103 36.9
Glyma.11G126200 Glycine max HOM05D002042 ORTHO05D003928 1.4e-07 59.3 90 40.0
Zm00001eb318710 Zea mays HOM05D002042 ORTHO05D003928 1.4e-07 59.3 86 37.2
EL10Ac3g06013 Beta vulgaris HOM05D002042 ORTHO05D003928 1.9e-07 58.9 103 37.9
BcaC02g12394 Brassica carinata HOM05D002042 ORTHO05D003928 1.9e-07 58.9 103 37.9
C04p04460 Brassica napus HOM05D002300 ORTHO05D002340 1.9e-07 58.9 103 37.9
C08p51400 Brassica napus HOM05D002042 ORTHO05D003928 1.9e-07 58.9 90 37.8
BolC4t22079H Brassica oleracea HOM05D002042 ORTHO05D002340 1.9e-07 58.9 103 37.9
BolC8t52666H Brassica oleracea HOM05D002042 ORTHO05D003928 1.9e-07 58.9 90 37.8
Gohir.A09G212200 Gossypium hirsutum HOM05D002042 ORTHO05D003928 1.9e-07 58.9 86 40.7
Gorai.006G229600 Gossypium raimondii HOM05D002042 ORTHO05D003928 1.9e-07 58.9 86 40.7
PSO675G9187 Papaver somniferum HOM05D002042 ORTHO05D003928 1.9e-07 58.9 90 40.0
Potri.017G026500 Populus trichocarpa HOM05D002042 ORTHO05D003928 1.9e-07 58.9 90 41.1
Hund03177 Selenicereus undatus HOM05D002042 ORTHO05D003928 1.9e-07 58.9 103 37.9
THA.LOC104826196 Tarenaya hassleriana HOM05D002042 ORTHO05D003928 1.9e-07 58.9 90 37.8
arahy.Tifrunner.gnm1.ann1.7XZ4E2 Arachis hypogaea HOM05D002042 ORTHO05D003928 2.5e-07 58.5 103 36.9
MSTRG.9750 Avicennia marina HOM05D002042 ORTHO05D003928 2.5e-07 58.5 90 40.0
BcaB01g03383 Brassica carinata HOM05D002042 ORTHO05D003928 2.5e-07 58.5 103 37.9
A03p24240 Brassica napus HOM05D002042 ORTHO05D003928 2.5e-07 58.5 103 37.9
A04p32710 Brassica napus HOM05D002042 ORTHO05D003928 2.5e-07 58.5 103 37.9
BraA03t11633Z Brassica rapa HOM05D002042 ORTHO05D003928 2.5e-07 58.5 103 37.9
BraA04t18734Z Brassica rapa HOM05D002042 ORTHO05D003928 2.5e-07 58.5 103 37.9
AT1G06130 Arabidopsis thaliana HOM05D002042 ORTHO05D003928 3.2e-07 58.2 90 36.7
BcaC02g11233 Brassica carinata HOM05D002042 ORTHO05D003928 3.2e-07 58.2 90 37.8
A05p14250 Brassica napus HOM05D002042 ORTHO05D003928 3.2e-07 58.2 90 37.8
BraA05t20356Z Brassica rapa HOM05D002042 ORTHO05D003928 3.2e-07 58.2 90 37.8
Gohir.A10G140100 Gossypium hirsutum HOM05D002042 ORTHO05D003928 3.2e-07 58.2 86 39.5
Gohir.D09G205700 Gossypium hirsutum HOM05D002042 ORTHO05D003928 3.2e-07 58.2 86 40.7
Carub.0004s2590 Capsella rubella HOM05D002042 ORTHO05D003928 4.2e-07 57.8 103 36.9
CARHR124980 Cardamine hirsuta HOM05D002042 ORTHO05D003928 4.2e-07 57.8 90 38.9
Dinv44157 Davidia involucrata HOM05D002042 ORTHO05D003928 4.2e-07 57.8 90 41.1
Gorai.011G139600 Gossypium raimondii HOM05D002042 ORTHO05D003928 4.2e-07 57.8 86 39.5
Os09g0516600 Oryza sativa ssp. japonica HOM05D002042 ORTHO05D003928 4.2e-07 57.8 86 37.2
Sp1g04920 Schrenkiella parvula HOM05D002042 ORTHO05D003928 4.2e-07 57.8 90 36.7
Thhalv10001542m.g Eutrema salsugineum HOM05D002042 ORTHO05D003928 5.5e-07 57.4 90 40.0
Gohir.D10G126700 Gossypium hirsutum HOM05D002042 ORTHO05D003928 5.5e-07 57.4 86 39.5
AagrBONN_evm.TU.Sc2ySwM_344.1644 Anthoceros agrestis HOM05D002042 ORTHO05D003928 7.1e-07 57.0 90 37.8
arahy.Tifrunner.gnm1.ann1.GWX7Z5 Arachis hypogaea HOM05D002042 ORTHO05D003928 7.1e-07 57.0 90 40.0
arahy.Tifrunner.gnm1.ann1.J488YR Arachis hypogaea HOM05D002042 ORTHO05D003928 7.1e-07 57.0 90 40.0
arahy.Tifrunner.gnm1.ann1.PFJT78 Arachis hypogaea HOM05D002042 ORTHO05D003928 7.1e-07 57.0 103 35.9
A09p67120 Brassica napus HOM05D002042 ORTHO05D003928 7.1e-07 57.0 90 36.7
BraA09t42045Z Brassica rapa HOM05D002042 ORTHO05D003928 7.1e-07 57.0 90 36.7
BcaB06g29314 Brassica carinata HOM05D002042 ORTHO05D003928 9.3e-07 56.6 103 36.9
Carub.0001s0545 Capsella rubella HOM05D002042 ORTHO05D003928 9.3e-07 56.6 90 37.8
HPP92_011696 Vanilla planifolia HOM05D002042 ORTHO05D003928 9.3e-07 56.6 86 40.7
BcaC01g05234 Brassica carinata HOM05D002042 ORTHO05D003928 1.2e-06 56.2 103 35.9
BcaC07g42084 Brassica carinata HOM05D002042 ORTHO05D003928 1.2e-06 56.2 90 36.7
C03p28910 Brassica napus HOM05D002042 ORTHO05D003928 1.2e-06 56.2 103 35.9
BolC3t15247H Brassica oleracea HOM05D002042 ORTHO05D003928 1.2e-06 56.2 103 35.9
AT2G43430 Arabidopsis thaliana HOM05D002042 ORTHO05D003928 1.6e-06 55.8 103 35.9
CARHR005630 Cardamine hirsuta HOM05D002042 ORTHO05D003928 1.6e-06 55.8 90 35.6
THA.LOC104802317 Tarenaya hassleriana HOM05D002042 ORTHO05D003928 1.6e-06 55.8 90 36.7
AL4G42170 Arabidopsis lyrata HOM05D002042 ORTHO05D003928 2.1e-06 55.5 103 35.9
THA.LOC104803823 Tarenaya hassleriana HOM05D002042 ORTHO05D003928 2.1e-06 55.5 90 36.7
ATR0743G260 Amborella trichopoda HOM05D002042 ORTHO05D003928 2.7e-06 55.1 90 37.8
C04p18990 Brassica napus HOM05D002042 ORTHO05D003928 2.7e-06 55.1 90 36.7
BolC4t23429H Brassica oleracea HOM05D002042 ORTHO05D003928 2.7e-06 55.1 90 36.7
Sp4g25530 Schrenkiella parvula HOM05D002042 ORTHO05D003928 2.7e-06 55.1 103 35.9
SEGI_22633 Sequoiadendron giganteum HOM05D002042 ORTHO05D003928 2.7e-06 55.1 90 37.8
AL1G16070 Arabidopsis lyrata HOM05D002042 ORTHO05D003928 3.5e-06 54.7 89 34.8
Aa31LG1G25180 Aethionema arabicum HOM05D002042 ORTHO05D003928 4.6e-06 54.3 90 38.9
HPP92_013543 Vanilla planifolia HOM05D002042 ORTHO05D003928 4.6e-06 54.3 86 38.4


User provided reference genes

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