Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064702.2 Olea europaea HOM05D005998 ORTHO05D007664 1.5e-86 323.2 202 100.0
Cc02_g30680 Coffea canephora HOM05D005998 ORTHO05D007664 2.1e-29 133.3 390 36.2
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 8.1e-29 131.3 378 27.0
Migut.N00691 Erythranthe guttata HOM05D005998 ORTHO05D007664 6.4e-26 121.7 120 50.8
Hma1.2p1_1756F.1_g301020 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 6.4e-26 121.7 347 28.0
PGSC0003DMG400020641 Solanum tuberosum HOM05D005998 ORTHO05D007664 1.9e-25 120.2 388 34.5
Solyc06g007680.1 Solanum lycopersicum HOM05D005998 ORTHO05D007664 7.1e-25 118.2 388 34.5
Peaxi162Scf00372g00061 Petunia axillaris HOM05D005998 ORTHO05D007664 1.2e-24 117.5 388 34.5
CAN.G181.48 Capsicum annuum HOM05D005998 ORTHO05D007664 2.7e-24 116.3 388 25.5
Sopen06g002580 Solanum pennellii HOM05D005998 ORTHO05D007664 2.7e-24 116.3 388 33.8
TWI75G0247 Tripterygium wilfordii HOM05D005998 ORTHO05D007664 6.0e-24 115.2 389 31.9
DCAR_000509 Daucus carota HOM05D005998 ORTHO05D007664 3.0e-23 112.8 120 78.3
Dinv28780 Davidia involucrata HOM05D005998 ORTHO05D003775 1.1e-22 110.9 117 78.6
Nitab4.5_0003952g0080 Nicotiana tabacum HOM05D005998 ORTHO05D007664 1.1e-22 110.9 388 34.5
Nitab4.5_0002641g0010 Nicotiana tabacum HOM05D005998 ORTHO05D007664 2.1e-21 106.7 388 34.5
FvH4_2g17281 Fragaria vesca HOM05D005998 ORTHO05D007664 1.1e-20 104.4 70 72.9
Actinidia23131 Actinidia chinensis HOM05D005998 ORTHO05D007664 9.0e-20 101.3 85 60.0
AL3G18890 Arabidopsis lyrata HOM05D005998 ORTHO05D007664 5.8e-19 98.6 113 48.7
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 5.8e-19 98.6 374 25.7
MD05G1151800 Malus domestica HOM05D005998 ORTHO05D007664 7.6e-19 98.2 72 68.1
RcHm_v2.0_Chr6g0281791 Rosa chinensis HOM05D005998 ORTHO05D007664 7.6e-19 98.2 70 67.1
Prupe.8G184400 Prunus persica HOM05D005998 ORTHO05D007664 1.0e-18 97.8 75 64.0
Sc05g0001600 Simmondsia chinensis HOM05D005998 ORTHO05D007664 1.3e-18 97.4 116 61.2
CARHR082230 Cardamine hirsuta HOM05D005998 ORTHO05D007664 2.9e-18 96.3 125 42.4
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 2.9e-18 96.3 121 43.8
CANSAT25G0419 Cannabis sativa HOM05D005998 ORTHO05D007664 3.8e-18 95.9 84 59.5
Atru.chr6.3489 Acer truncatum HOM05D005998 ORTHO05D007664 8.4e-18 94.7 73 64.4
Sp3g06470 Schrenkiella parvula HOM05D005998 ORTHO05D007664 8.4e-18 94.7 129 40.3
Lsat_1_v5_gn_8_98580 Lactuca sativa HOM05D005998 ORTHO05D007664 1.4e-17 94.0 120 40.8
COL.COLO4_29925 Corchorus olitorius HOM05D005998 ORTHO05D007664 1.9e-17 93.6 79 59.5
AT3G07550 Arabidopsis thaliana HOM05D005998 ORTHO05D007664 2.5e-17 93.2 73 61.6
Thhalv10020882m.g Eutrema salsugineum HOM05D005998 ORTHO05D007664 2.5e-17 93.2 112 47.3
Thecc.01G205300 Theobroma cacao HOM05D005998 ORTHO05D007664 3.2e-17 92.8 84 57.1
Lj3g0009731 Lotus japonicus HOM05D005998 ORTHO05D007664 4.2e-17 92.4 73 63.0
Carub.0003s0710 Capsella rubella HOM05D005998 ORTHO05D007664 5.5e-17 92.0 82 54.9
Rhsim13G0055600 Rhododendron simsii HOM05D005998 ORTHO05D007664 5.5e-17 92.0 118 39.8
CSS0043446 Camellia sinensis var. sinensis HOM05D005998 ORTHO05D007664 7.1e-17 91.7 121 71.1
MD10G1146000 Malus domestica HOM05D005998 ORTHO05D007664 9.3e-17 91.3 102 52.0
RcHm_v2.0_Chr5g0064201 Rosa chinensis HOM05D005998 ORTHO05D007664 9.3e-17 91.3 119 53.8
THA.LOC104819025 Tarenaya hassleriana HOM05D005998 ORTHO05D007664 9.3e-17 91.3 85 55.3
Gohir.D11G153100 Gossypium hirsutum HOM05D005998 ORTHO05D007664 1.2e-16 90.9 84 57.1
Gorai.007G162000 Gossypium raimondii HOM05D005998 ORTHO05D007664 1.2e-16 90.9 84 57.1
QL09p045684 Quercus lobata HOM05D005998 ORTHO05D007664 1.2e-16 90.9 86 59.3
Ca_23566_v3 Cicer arietinum L. HOM05D005998 ORTHO05D007664 2.1e-16 90.1 73 58.9
Gohir.A11G144800 Gossypium hirsutum HOM05D005998 ORTHO05D007664 2.1e-16 90.1 84 57.1
Eucgr.H00683 Eucalyptus grandis HOM05D005998 ORTHO05D007664 4.6e-16 89.0 84 57.1
BraA05t22797Z Brassica rapa HOM05D005998 ORTHO05D007664 6.0e-16 88.6 137 38.7
BcaC05g29548 Brassica carinata HOM05D005998 ORTHO05D007664 7.9e-16 88.2 103 48.5
Psat4g158400 Pisum sativum HOM05D005998 ORTHO05D007664 7.9e-16 88.2 73 57.5
Ciclev10015543m.g Citrus clementina HOM05D005998 ORTHO05D007664 1.0e-15 87.8 84 57.1
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 1.3e-15 87.4 121 37.2
BolC5t34631H Brassica oleracea HOM05D005998 ORTHO05D007664 2.3e-15 86.7 135 37.0
TAR362G0769 Trochodendron aralioides HOM05D005998 ORTHO05D007664 2.3e-15 86.7 73 60.3
Haze_03601 Corylus avellana HOM05D005998 ORTHO05D007664 3.0e-15 86.3 120 54.2
BcaC05g29549 Brassica carinata HOM05D005998 ORTHO05D007664 3.9e-15 85.9 135 37.0
A05p40660 Brassica napus HOM05D005998 ORTHO05D007664 3.9e-15 85.9 137 38.0
C05p59770 Brassica napus HOM05D005998 ORTHO05D007664 3.9e-15 85.9 135 37.0
Manes.13G057500 Manihot esculenta HOM05D005998 ORTHO05D007664 8.7e-15 84.7 84 54.8
Medtr8g028140 Medicago truncatula HOM05D005998 ORTHO05D007664 1.5e-14 84.0 73 54.8
TPR.G5126 Trifolium pratense HOM05D005998 ORTHO05D007664 1.9e-14 83.6 73 57.5
Glyma.07G060100 Glycine max HOM05D005998 ORTHO05D007664 2.5e-14 83.2 73 54.8
PSO017G2023 Papaver somniferum HOM05D005998 ORTHO05D007664 2.5e-14 83.2 121 38.0
Nn1g09548 Nelumbo nucifera HOM05D005998 ORTHO05D007664 4.3e-14 82.4 78 52.6
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 1.6e-13 80.5 73 53.4
Cpa.g.sc8.24 Carica papaya HOM05D005998 ORTHO05D007664 2.1e-13 80.1 68 55.9
PSO573G0042 Papaver somniferum HOM05D005998 ORTHO05D007664 3.7e-13 79.3 111 61.3
Aa31LG5G18090 Aethionema arabicum HOM05D005998 ORTHO05D007664 4.8e-13 79.0 137 39.4
Sabra17G0050000 Salix brachista HOM05D005998 ORTHO05D007664 8.2e-13 78.2 73 52.1
ECA247G1907 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.4e-12 76.6 120 55.0
RcHm_v2.0_Chr7g0205731 Rosa chinensis HOM05D005998 ORTHO05D007664 2.4e-12 76.6 106 55.7
ECA247G3549 Erigeron canadensis HOM05D005998 ORTHO05D007664 4.1e-12 75.9 120 57.5
PGR083G1807 Punica granatum HOM05D005998 ORTHO05D007664 4.1e-12 75.9 73 56.2
Potri.017G056400 Populus trichocarpa HOM05D005998 ORTHO05D007664 6.9e-12 75.1 73 49.3
HanXRQChr08g0231291 Helianthus annuus HOM05D005998 ORTHO05D007664 1.5e-11 73.9 124 41.1
HanXRQChr08g0231301 Helianthus annuus HOM05D005998 ORTHO05D007664 1.5e-11 73.9 124 41.1
PSO573G0007 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-11 73.9 113 37.2
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 3.4e-11 72.8 113 36.3
Duzib138G0171 Durio zibethinus HOM05D005998 ORTHO05D007664 1.0e-10 71.2 41 68.3
Os11g0264200 Oryza sativa ssp. japonica HOM05D005998 ORTHO05D007664 1.7e-10 70.5 47 55.3
HPP92_024394 Vanilla planifolia HOM05D005998 ORTHO05D007664 1.7e-10 70.5 46 56.5
Lsat_1_v5_gn_4_46380 Lactuca sativa HOM05D005998 ORTHO05D007664 8.4e-10 68.2 121 57.9
HanXRQChr08g0231281 Helianthus annuus HOM05D005998 ORTHO05D007664 1.1e-09 67.8 127 40.2
Zm00001eb182340 Zea mays HOM05D005998 ORTHO05D015715 2.5e-09 66.6 46 52.2
Medtr1g018790 Medicago truncatula HOM05D001905 ORTHO05D001820 3.2e-09 66.2 131 33.6
CDE08G0319 Ceratophyllum demersum HOM05D005998 ORTHO05D007664 4.2e-09 65.9 44 56.8
Zm00001eb048880 Zea mays HOM05D005998 ORTHO05D015715 7.1e-09 65.1 46 54.3
PSO573G0035 Papaver somniferum HOM05D005998 ORTHO05D007664 2.7e-08 63.2 133 30.8
Sabra17G0048300 Salix brachista HOM05D005998 ORTHO05D007664 2.7e-08 63.2 116 63.8
Aqoxy6G02895 Aquilegia oxysepala HOM05D001905 ORTHO05D001820 3.5e-08 62.8 133 33.8
Duzib211G0440 Durio zibethinus HOM05D005998 ORTHO05D007664 7.9e-08 61.6 118 60.2
Zm00001eb293000 Zea mays HOM05D000001 ORTHO05D015715 7.9e-08 61.6 42 54.8
ECA247G1593 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.8e-07 60.5 45 55.6
EL10Ac5g10571 Beta vulgaris HOM05D005998 ORTHO05D007664 3.9e-07 59.3 65 50.8
ECA232G4734 Erigeron canadensis HOM05D005998 ORTHO05D007664 3.9e-07 59.3 112 33.9
ECA247G1983 Erigeron canadensis HOM05D005998 ORTHO05D007664 3.9e-07 59.3 63 47.6
FAN27G0564 Fragaria x ananassa HOM05D001905 ORTHO05D001820 3.9e-07 59.3 120 35.8
ECA247G2512 Erigeron canadensis HOM05D005998 ORTHO05D007664 6.7e-07 58.5 67 47.8
Psat6g015040 Pisum sativum HOM05D001905 ORTHO05D001820 1.5e-06 57.4 123 33.3
Lj5g0027346 Lotus japonicus HOM05D001905 ORTHO05D001820 2.5e-06 56.6 123 33.3
MD08G1093600 Malus domestica HOM05D001905 ORTHO05D001820 2.5e-06 56.6 121 37.2
PSO017G3521 Papaver somniferum HOM05D005998 ORTHO05D007664 2.5e-06 56.6 64 43.8
Potri.002G123100 Populus trichocarpa HOM05D001905 ORTHO05D001820 2.5e-06 56.6 120 35.8
AUR62008051 Chenopodium quinoa HOM05D005998 ORTHO05D007664 3.3e-06 56.2 64 48.4
Lalb_Chr14g0368481 Lupinus albus HOM05D001905 ORTHO05D001820 3.3e-06 56.2 129 33.3
SEGI_17775 Sequoiadendron giganteum HOM05D005998 ORTHO05D007664 3.3e-06 56.2 39 53.8
THA.LOC104824980 Tarenaya hassleriana HOM05D001905 ORTHO05D001820 3.3e-06 56.2 124 33.1
ECA247G2923 Erigeron canadensis HOM05D005998 ORTHO05D003386 4.3e-06 55.8 47 48.9
Eucgr.H00682 Eucalyptus grandis HOM05D005998 ORTHO05D007664 4.3e-06 55.8 37 56.8
FvH4_2g33740 Fragaria vesca HOM05D001905 ORTHO05D001820 4.3e-06 55.8 120 35.0
FAN24G0672 Fragaria x ananassa HOM05D001905 ORTHO05D001820 4.3e-06 55.8 120 35.0
FAN28G1670 Fragaria x ananassa HOM05D001905 ORTHO05D001820 4.3e-06 55.8 123 35.0
Sabra14G0016100 Salix brachista HOM05D001905 ORTHO05D001820 4.3e-06 55.8 124 32.3
Solyc04g078490.1 Solanum lycopersicum HOM05D001905 ORTHO05D001820 4.3e-06 55.8 124 31.5
Sopen04g032090 Solanum pennellii HOM05D001905 ORTHO05D001820 4.3e-06 55.8 124 31.5
Cfa018056 Carpinus fangiana HOM05D001905 ORTHO05D001820 5.7e-06 55.5 120 34.2
FAN15G3106 Fragaria x ananassa HOM05D001905 ORTHO05D001820 5.7e-06 55.5 120 35.0
FAN20G2298 Fragaria x ananassa HOM05D001905 ORTHO05D001820 5.7e-06 55.5 120 35.0
Phvul.001G024700 Phaseolus vulgaris HOM05D001905 ORTHO05D001820 5.7e-06 55.5 123 32.5
AUR62028626 Chenopodium quinoa HOM05D005998 ORTHO05D007664 7.4e-06 55.1 111 33.3
Ca_13256_v3 Cicer arietinum L. HOM05D001905 ORTHO05D001820 7.4e-06 55.1 123 32.5
FAN04G1885 Fragaria x ananassa HOM05D001905 ORTHO05D001820 7.4e-06 55.1 113 36.3
TWI36G1279 Tripterygium wilfordii HOM05D001905 ORTHO05D001820 7.4e-06 55.1 122 33.6
DCAR_021477 Daucus carota HOM05D001905 ORTHO05D001820 9.7e-06 54.7 118 32.2
FAN26G0396 Fragaria x ananassa HOM05D001905 ORTHO05D001820 9.7e-06 54.7 120 35.0
Glyma.17G238700 Glycine max HOM05D001905 ORTHO05D001820 9.7e-06 54.7 123 32.5
Sabra02G0096400 Salix brachista HOM05D001905 ORTHO05D001820 9.7e-06 54.7 120 34.2
PGSC0003DMG400041336 Solanum tuberosum HOM05D001905 ORTHO05D001820 9.7e-06 54.7 124 30.6


User provided reference genes

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