Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 2.1e-100 369.0 181 100.0
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 4.7e-52 208.4 171 61.4
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 1.0e-51 207.2 185 56.8
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 8.8e-51 204.1 180 61.1
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 1.5e-50 203.4 175 57.7
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 2.0e-50 203.0 174 60.3
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 2.6e-50 202.6 177 59.9
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 7.5e-50 201.1 171 62.0
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 3.7e-49 198.7 174 58.6
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 1.4e-48 196.8 177 57.1
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 1.4e-48 196.8 176 56.8
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 1.4e-48 196.8 174 58.0
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.2e-47 193.7 181 58.6
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 4.5e-47 191.8 178 56.2
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 1.3e-46 190.3 177 55.9
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 8.6e-46 187.6 181 53.6
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 1.9e-45 186.4 170 54.1
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 5.5e-45 184.9 170 53.5
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 2.1e-44 183.0 177 55.9
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 1.0e-43 180.6 189 53.4
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 1.4e-43 180.3 173 52.0
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.2e-42 177.2 171 52.0
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.2e-42 177.2 178 55.6
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 2.0e-42 176.4 165 54.5
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 2.0e-42 176.4 171 51.5
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 3.4e-42 175.6 173 53.2
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 1.3e-41 173.7 177 51.4
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 3.7e-41 172.2 176 54.5
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 8.3e-41 171.0 172 52.3
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 1.4e-40 170.2 172 52.9
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 2.4e-40 169.5 186 48.9
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 3.1e-40 169.1 174 53.4
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 4.1e-40 168.7 186 47.8
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 5.4e-40 168.3 173 52.0
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 1.6e-39 166.8 114 69.3
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 2.0e-39 166.4 172 52.9
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 2.0e-39 166.4 176 49.4
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 2.7e-39 166.0 189 48.7
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 1.7e-38 163.3 125 63.2
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 1.7e-38 163.3 108 70.4
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 1.7e-38 163.3 172 51.2
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 2.3e-38 162.9 172 52.9
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.9e-38 162.5 157 52.2
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.9e-38 162.2 157 52.2
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 5.0e-38 161.8 193 46.6
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 6.6e-38 161.4 157 53.5
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 1.1e-37 160.6 190 47.9
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 3.3e-37 159.1 171 50.3
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 5.6e-37 158.3 186 48.9
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 7.3e-37 157.9 113 67.3
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 2.8e-36 156.0 171 48.5
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 3.6e-36 155.6 178 51.1
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 6.1e-36 154.8 186 47.8
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 3.1e-35 152.5 114 63.2
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 4.0e-35 152.1 165 52.1
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 1.5e-34 150.2 114 58.8
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 3.4e-34 149.1 184 47.8
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 4.4e-34 148.7 108 63.0
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 4.4e-34 148.7 105 64.8
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 5.8e-34 148.3 107 64.5
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 9.8e-34 147.5 167 45.5
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 1.7e-33 146.7 179 48.6
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 1.7e-33 146.7 120 60.0
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 1.7e-33 146.7 109 64.2
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 2.2e-33 146.4 167 47.3
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 6.4e-33 144.8 103 64.1
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 8.3e-33 144.4 168 48.8
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 3.2e-32 142.5 89 71.9
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 7.0e-32 141.4 179 47.5
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 9.2e-32 141.0 170 48.2
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 2.0e-31 139.8 170 45.9
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 3.5e-31 139.0 107 57.9
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 2.3e-30 136.3 131 53.4
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 2.3e-30 136.3 131 53.4
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 5.0e-30 135.2 118 55.1
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 1.5e-29 133.7 168 47.6
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 1.2e-28 130.6 87 70.1
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 1.6e-28 130.2 179 43.0
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 2.8e-28 129.4 167 43.7
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 3.6e-28 129.0 105 61.9
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 4.7e-28 128.6 97 66.0
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 6.2e-28 128.3 111 57.7
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 1.8e-27 126.7 172 43.6
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 1.8e-27 126.7 109 59.6
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 3.1e-27 125.9 167 43.1
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 5.8e-26 121.7 108 57.4
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 9.8e-26 120.9 182 41.8
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 1.3e-25 120.6 185 44.9
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 2.9e-25 119.4 183 41.5
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 4.9e-25 118.6 189 40.2
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 2.4e-24 116.3 169 43.2
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 2.4e-24 116.3 64 78.1
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 7.0e-24 114.8 215 37.7
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 1.2e-23 114.0 195 37.9
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 1.2e-23 114.0 169 42.6
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 1.6e-23 113.6 192 40.1
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 2.7e-23 112.8 191 39.3
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 4.6e-23 112.1 187 39.6
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 6.0e-23 111.7 209 37.8
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 6.0e-23 111.7 106 51.9
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 7.8e-23 111.3 192 38.0
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 7.8e-23 111.3 145 42.1
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 3.9e-22 109.0 191 38.2
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 5.1e-22 108.6 214 35.5
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 5.1e-22 108.6 191 38.2
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 1.5e-21 107.1 186 37.1
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 1.5e-21 107.1 192 37.5
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 3.3e-21 105.9 187 39.6
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 5.6e-21 105.1 95 52.6
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 5.6e-21 105.1 192 37.5
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 5.6e-21 105.1 192 37.5
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 7.3e-21 104.8 187 39.6
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 7.3e-21 104.8 194 38.1
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 9.5e-21 104.4 194 38.7
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 2.8e-20 102.8 82 57.3
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 6.2e-20 101.7 150 41.3
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 1.1e-19 100.9 129 41.9
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.8e-19 100.1 69 66.7
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 4.0e-19 99.0 143 40.6
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 8.9e-19 97.8 179 40.2
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 1.5e-18 97.1 70 61.4
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 3.4e-18 95.9 68 60.3
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 3.4e-18 95.9 71 63.4
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 7.5e-18 94.7 66 62.1
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.7e-17 93.6 170 37.6
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 3.5e-15 85.9 61 62.3
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 3.5e-15 85.9 61 62.3
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 4.6e-15 85.5 66 57.6
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 4.6e-15 85.5 66 57.6
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 4.6e-15 85.5 66 57.6
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 4.6e-15 85.5 66 57.6
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 1.1e-11 74.3 77 42.9


User provided reference genes

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