Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 9.6e-58 226.5 105 100.0
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 2.5e-29 132.1 108 63.9
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 5.5e-29 131.0 98 63.3
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 5.5e-29 131.0 103 60.2
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 7.2e-29 130.6 103 60.2
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 9.4e-29 130.2 99 64.6
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 2.7e-28 128.6 98 62.2
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 3.6e-28 128.3 110 60.0
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 4.7e-28 127.9 106 59.4
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 6.1e-28 127.5 99 63.6
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 8.0e-28 127.1 113 61.1
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 1.4e-27 126.3 112 61.6
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 2.3e-27 125.6 96 64.6
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 2.3e-27 125.6 96 63.5
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 4.0e-27 124.8 110 59.1
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 8.8e-27 123.6 97 61.9
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 1.5e-26 122.9 108 55.6
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 1.5e-26 122.9 112 59.8
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 4.4e-26 121.3 105 55.2
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 5.7e-26 120.9 103 59.2
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 9.7e-26 120.2 112 57.1
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 1.3e-25 119.8 95 64.2
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 1.3e-25 119.8 102 59.8
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 1.3e-25 119.8 98 62.2
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 1.7e-25 119.4 99 62.6
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 1.7e-25 119.4 96 63.5
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.2e-25 119.0 104 55.8
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 2.2e-25 119.0 112 56.2
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 2.2e-25 119.0 104 55.8
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 2.2e-25 119.0 108 56.5
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 2.2e-25 119.0 109 53.2
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 3.7e-25 118.2 96 58.3
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 3.7e-25 118.2 95 61.1
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 4.8e-25 117.9 112 55.4
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 4.8e-25 117.9 112 55.4
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 4.8e-25 117.9 103 56.3
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 6.3e-25 117.5 95 58.9
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 6.3e-25 117.5 103 59.2
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 8.2e-25 117.1 101 57.4
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 1.1e-24 116.7 98 57.1
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 1.4e-24 116.3 83 65.1
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 2.4e-24 115.5 94 56.4
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 2.4e-24 115.5 98 57.1
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 2.4e-24 115.5 110 56.4
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 2.4e-24 115.5 104 57.7
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 4.1e-24 114.8 98 57.1
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 4.1e-24 114.8 83 62.7
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 5.3e-24 114.4 106 58.5
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 7.0e-24 114.0 107 59.8
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 7.0e-24 114.0 107 59.8
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 9.1e-24 113.6 99 53.5
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 9.1e-24 113.6 115 50.4
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 9.1e-24 113.6 97 54.6
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 1.2e-23 113.2 51 88.2
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 1.6e-23 112.8 106 55.7
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 1.6e-23 112.8 115 51.3
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 2.0e-23 112.5 110 52.7
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 2.7e-23 112.1 102 57.8
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 3.5e-23 111.7 99 52.5
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 4.5e-23 111.3 103 54.4
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 4.5e-23 111.3 70 67.1
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 4.5e-23 111.3 107 53.3
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 4.5e-23 111.3 100 55.0
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 1.0e-22 110.2 50 90.0
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 1.0e-22 110.2 98 52.0
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 1.3e-22 109.8 112 48.2
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 1.3e-22 109.8 97 55.7
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.3e-22 109.8 102 53.9
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 1.7e-22 109.4 95 54.7
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 1.7e-22 109.4 106 54.7
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 1.7e-22 109.4 53 83.0
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 2.2e-22 109.0 50 86.0
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 2.2e-22 109.0 105 54.3
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 2.9e-22 108.6 93 58.1
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 2.9e-22 108.6 65 72.3
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 2.9e-22 108.6 49 89.8
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 3.8e-22 108.2 77 62.3
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 6.5e-22 107.5 51 84.3
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 8.5e-22 107.1 102 52.9
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 1.1e-21 106.7 104 51.9
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 1.5e-21 106.3 48 87.5
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 1.5e-21 106.3 48 87.5
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 1.9e-21 105.9 53 75.5
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 2.5e-21 105.5 50 84.0
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 3.2e-21 105.1 97 50.5
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 4.2e-21 104.8 76 63.2
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 5.5e-21 104.4 99 49.5
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 5.5e-21 104.4 99 49.5
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 5.5e-21 104.4 99 49.5
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 5.5e-21 104.4 99 49.5
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 5.5e-21 104.4 83 55.4
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 7.2e-21 104.0 100 50.0
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 9.4e-21 103.6 48 85.4
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 1.2e-20 103.2 95 54.7
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 1.2e-20 103.2 96 51.0
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 1.2e-20 103.2 48 83.3
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 1.2e-20 103.2 48 83.3
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 1.2e-20 103.2 48 83.3
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 1.2e-20 103.2 109 50.5
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 1.2e-20 103.2 50 84.0
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 2.1e-20 102.4 99 48.5
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 3.6e-20 101.7 93 51.6
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 8.0e-20 100.5 106 46.2
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 1.0e-19 100.1 60 70.0
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 1.8e-19 99.4 50 74.0
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 1.8e-19 99.4 50 74.0
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 4.0e-19 98.2 45 82.2
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 5.2e-19 97.8 104 46.2
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 3.4e-18 95.1 108 50.0
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 5.7e-18 94.4 50 76.0
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 1.7e-17 92.8 93 46.2
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 2.8e-17 92.0 50 70.0
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 8.3e-17 90.5 75 53.3
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 7.7e-15 84.0 48 64.6
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 3.8e-14 81.6 49 59.2
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 5.5e-13 77.8 47 63.8


User provided reference genes

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