Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 1.5e-158 562.8 286 100.0
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.9e-103 379.8 324 59.6
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 1.9e-100 369.8 326 61.0
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 5.6e-100 368.2 334 60.8
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 2.8e-99 365.9 328 60.1
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 2.8e-99 365.9 334 60.8
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.8e-98 363.2 326 59.8
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 6.8e-98 361.3 334 60.5
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 2.0e-97 359.8 328 58.5
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 9.9e-97 357.5 325 59.4
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 3.7e-96 355.5 336 57.4
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 3.7e-96 355.5 376 51.3
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 6.4e-96 354.8 328 58.8
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.9e-95 353.2 321 59.8
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 4.1e-95 352.1 330 58.5
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 7.1e-95 351.3 326 59.8
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 1.2e-94 350.5 316 59.2
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 3.5e-94 349.0 334 58.4
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 7.8e-94 347.8 323 59.8
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 2.3e-93 346.3 322 60.2
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 3.0e-93 345.9 334 59.0
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 1.9e-92 343.2 324 59.6
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 2.5e-92 342.8 332 57.2
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 3.3e-92 342.4 312 59.3
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 4.3e-92 342.0 325 57.2
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 1.6e-91 340.1 334 58.1
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 2.8e-91 339.3 340 55.9
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 1.1e-90 337.4 330 54.2
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 1.1e-90 337.4 329 58.4
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 5.2e-90 335.1 329 56.8
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 1.2e-89 334.0 306 59.5
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 1.2e-89 334.0 329 55.0
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 2.0e-89 333.2 331 58.3
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 2.0e-89 333.2 331 58.3
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 4.4e-89 332.0 322 55.3
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 4.4e-89 332.0 334 56.3
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 4.4e-89 332.0 301 60.1
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 5.8e-89 331.6 334 56.6
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 9.9e-89 330.9 324 54.9
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 9.9e-89 330.9 332 56.3
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 9.9e-89 330.9 322 59.0
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 9.9e-89 330.9 335 55.2
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.3e-88 330.5 328 56.7
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.7e-88 330.1 332 56.0
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 1.7e-88 330.1 331 56.5
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 2.2e-88 329.7 323 55.4
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 3.8e-88 328.9 322 54.7
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 4.9e-88 328.6 327 56.3
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 4.9e-88 328.6 333 55.6
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 4.9e-88 328.6 327 54.7
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 8.4e-88 327.8 325 55.4
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 1.1e-87 327.4 323 57.0
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 1.4e-87 327.0 332 53.3
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 1.9e-87 326.6 338 54.7
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 3.2e-87 325.9 328 55.5
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 4.2e-87 325.5 324 54.3
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 4.2e-87 325.5 323 56.7
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 1.6e-86 323.6 298 60.4
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 2.1e-86 323.2 330 55.5
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 2.7e-86 322.8 324 55.2
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 2.7e-86 322.8 330 53.6
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 2.7e-86 322.8 326 52.8
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 2.7e-86 322.8 318 55.7
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 6.0e-86 321.6 301 59.1
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 7.8e-86 321.2 330 55.2
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 7.8e-86 321.2 274 61.3
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 1.0e-85 320.9 266 62.4
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 2.3e-85 319.7 337 54.9
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 3.0e-85 319.3 335 54.9
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 3.9e-85 318.9 300 56.3
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 5.1e-85 318.5 303 56.1
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 6.6e-85 318.2 301 58.1
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 8.7e-85 317.8 266 59.0
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 1.5e-84 317.0 323 54.5
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 1.5e-84 317.0 250 63.6
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 2.5e-84 316.2 330 51.2
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 4.3e-84 315.5 327 54.1
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 4.8e-83 312.0 267 59.9
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 1.8e-82 310.1 315 55.2
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 1.8e-82 310.1 315 55.2
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 2.4e-82 309.7 300 57.0
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 2.4e-82 309.7 300 57.0
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 6.9e-82 308.1 322 54.0
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 9.0e-82 307.8 316 54.4
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 9.0e-82 307.8 326 53.1
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 1.2e-81 307.4 307 55.0
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.2e-81 307.4 316 57.0
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.5e-81 307.0 250 60.4
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 1.5e-81 307.0 310 55.5
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 2.0e-81 306.6 323 54.8
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 3.4e-81 305.8 343 51.9
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 7.6e-81 304.7 312 54.5
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 9.9e-81 304.3 250 60.0
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 1.7e-80 303.5 332 52.7
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 1.1e-79 300.8 251 60.6
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 2.4e-79 299.7 310 53.9
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 1.2e-78 297.4 253 60.5
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 2.5e-76 289.7 294 53.1
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 4.3e-76 288.9 404 44.8
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 4.8e-75 285.4 300 53.3
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 8.1e-75 284.6 295 54.6
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 1.4e-74 283.9 313 51.1
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 1.2e-73 280.8 252 56.7
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 1.5e-73 280.4 274 54.4
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 1.3e-72 277.3 270 54.4
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 2.1e-70 270.0 251 55.0
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 1.8e-69 266.9 295 50.8
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 4.8e-67 258.8 347 46.4
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 2.4e-66 256.5 240 57.1
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 1.3e-64 250.8 275 49.8
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 2.2e-64 250.0 176 72.2
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 5.1e-61 238.8 241 54.8
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 7.4e-60 235.0 283 44.5
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 6.3e-51 205.3 141 67.4
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.1e-50 204.5 128 75.8
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.1e-50 204.5 128 75.8
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 1.4e-50 204.1 215 55.3
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 5.3e-50 202.2 127 78.7
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 2.6e-41 173.3 276 39.1
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 1.4e-39 167.5 256 37.9
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.6e-38 164.1 141 63.8
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 2.1e-38 163.7 232 39.7
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 2.4e-34 150.2 248 36.7
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 5.3e-34 149.1 247 34.4
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 3.5e-33 146.4 204 45.6
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 4.5e-33 146.0 205 47.3
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 5.9e-33 145.6 104 69.2
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 2.2e-32 143.7 91 76.9
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 5.0e-32 142.5 135 57.8
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 1.8e-29 134.0 140 55.7
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 1.1e-26 124.8 110 60.9
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 5.3e-26 122.5 241 32.4
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 1.5e-23 114.4 236 28.4
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 5.5e-23 112.5 65 80.0
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 6.1e-22 109.0 139 46.8
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 8.0e-22 108.6 82 64.6
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 1.3e-19 101.3 66 71.2
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 8.3e-19 98.6 65 70.8
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 1.8e-18 97.4 65 70.8
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 3.5e-17 93.2 85 60.0
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 1.0e-16 91.7 209 28.2
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 5.0e-16 89.4 116 47.4
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 5.0e-16 89.4 116 47.4
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 6.5e-16 89.0 95 54.7
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 8.5e-16 88.6 82 56.1
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 6.1e-14 82.4 109 48.6
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 8.0e-14 82.0 73 54.8
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 5.2e-13 79.3 52 71.2
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 2.6e-12 77.0 47 74.5
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 5.7e-12 75.9 65 58.5
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 1.4e-10 71.2 47 70.2
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 8.6e-08 62.0 47 61.7


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