Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 7.8e-263 909.8 435 100.0
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 3.4e-197 691.8 433 74.8
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 9.8e-197 690.3 423 76.1
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 3.1e-195 685.3 422 75.1
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 1.2e-194 683.3 428 73.6
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 2.7e-194 682.2 423 74.2
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 2.7e-194 682.2 423 74.2
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 6.1e-191 671.0 421 75.3
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 3.0e-190 668.7 421 74.6
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 1.5e-189 666.4 422 73.2
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 2.0e-189 666.0 421 74.1
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 2.6e-189 665.6 426 70.9
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 2.6e-189 665.6 424 72.2
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 9.8e-189 663.7 426 73.0
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 1.3e-188 663.3 421 73.9
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 2.2e-188 662.5 420 73.1
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 8.3e-188 660.6 421 72.9
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 8.3e-188 660.6 421 72.2
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 1.1e-187 660.2 428 72.7
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 1.8e-187 659.4 422 73.0
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 3.1e-187 658.7 433 72.1
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 3.1e-187 658.7 425 71.3
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 4.1e-187 658.3 421 72.4
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 1.2e-186 656.8 422 71.6
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 2.7e-186 655.6 426 70.0
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 3.5e-186 655.2 423 72.1
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 5.9e-186 654.4 427 71.9
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 3.8e-185 651.7 421 72.2
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 3.8e-185 651.7 421 72.2
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 5.0e-185 651.4 422 72.3
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 6.6e-185 651.0 426 70.2
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 8.6e-185 650.6 438 70.5
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 8.6e-185 650.6 426 70.0
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 8.6e-185 650.6 428 72.7
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.1e-184 650.2 420 71.7
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 2.5e-184 649.0 422 71.1
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 2.5e-184 649.0 425 70.8
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 2.5e-184 649.0 422 69.7
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 3.3e-184 648.7 421 71.3
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.3e-184 648.7 421 72.0
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 3.3e-184 648.7 422 69.9
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 3.3e-184 648.7 426 71.1
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 4.3e-184 648.3 422 70.9
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 4.3e-184 648.3 424 70.8
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 5.6e-184 647.9 422 70.1
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 5.6e-184 647.9 422 70.1
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 9.5e-184 647.1 426 69.7
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 1.2e-183 646.7 422 69.2
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 3.6e-183 645.2 423 70.9
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 4.7e-183 644.8 422 69.4
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 8.0e-183 644.0 426 69.0
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 8.0e-183 644.0 421 69.4
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 1.0e-182 643.7 422 69.7
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 1.8e-182 642.9 426 68.8
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 1.8e-182 642.9 423 70.7
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 2.3e-182 642.5 424 71.0
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 5.2e-182 641.3 424 70.8
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 1.2e-181 640.2 421 70.8
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 1.5e-181 639.8 426 70.7
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 2.0e-181 639.4 426 70.7
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 4.4e-181 638.3 426 71.1
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 4.4e-181 638.3 423 71.2
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 1.7e-180 636.3 426 68.5
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 3.7e-180 635.2 431 68.4
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 3.7e-180 635.2 421 69.8
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 6.4e-180 634.4 424 68.4
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 1.4e-179 633.3 426 70.7
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 4.1e-179 631.7 424 68.9
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 4.6e-178 628.2 425 67.8
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.0e-177 627.1 375 74.9
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 6.6e-177 624.4 426 69.5
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.5e-176 623.2 422 70.1
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 4.3e-176 621.7 427 67.4
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 4.3e-176 621.7 426 66.0
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 5.6e-176 621.3 429 69.5
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 1.6e-175 619.8 431 66.4
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 4.0e-174 615.1 421 66.0
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 6.8e-174 614.4 355 76.9
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 8.9e-174 614.0 426 66.4
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 2.0e-173 612.8 428 67.5
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 2.6e-173 612.5 436 66.5
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 2.2e-172 609.4 345 78.3
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.7e-172 608.6 421 69.1
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 6.4e-172 607.8 426 66.2
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 1.4e-171 606.7 389 70.4
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 1.4e-171 606.7 426 66.0
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 2.4e-171 605.9 334 79.9
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 3.2e-171 605.5 430 66.5
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 1.3e-169 600.1 428 66.8
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 2.3e-169 599.4 424 66.3
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 6.6e-169 597.8 421 66.0
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 1.1e-168 597.0 422 64.5
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 1.1e-168 597.0 425 65.2
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 7.3e-168 594.3 427 66.3
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 3.6e-167 592.0 425 64.7
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 4.7e-167 591.7 336 77.4
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 6.2e-167 591.3 429 64.3
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 1.1e-166 590.5 429 64.3
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 6.8e-166 587.8 429 64.1
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 4.4e-165 585.1 429 63.6
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 4.4e-165 585.1 429 63.6
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 5.8e-165 584.7 424 65.3
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 2.2e-164 582.8 349 73.4
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 4.9e-164 581.6 426 64.1
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 3.2e-163 578.9 431 64.7
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 1.6e-162 576.6 357 70.6
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 2.7e-162 575.9 403 67.0
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 1.3e-156 557.0 360 66.9
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 1.9e-155 553.1 360 66.4
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 2.4e-155 552.7 354 70.1
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 5.4e-155 551.6 357 68.1
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 4.0e-150 535.4 422 61.1
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 5.6e-144 515.0 281 79.4
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 7.1e-139 498.0 281 76.9
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 7.9e-138 494.6 353 62.3
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 8.7e-137 491.1 353 62.6
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 5.8e-133 478.4 351 60.1
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 3.8e-132 475.7 352 62.8
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 7.1e-123 444.9 345 62.3
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 2.5e-107 393.3 215 80.9
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 5.7e-104 382.1 209 79.9
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 8.5e-100 368.2 356 51.4
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 1.1e-99 367.9 215 74.4
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 1.0e-92 344.7 291 54.6
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 1.8e-65 254.2 259 54.4
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 5.2e-57 226.1 401 39.2
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 4.0e-33 146.7 93 64.5
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 8.1e-26 122.5 198 36.4
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 1.1e-25 122.1 80 66.2
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.1e-17 95.5 140 40.0


User provided reference genes

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