Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064194.1 Olea europaea HOM05D004485 ORTHO05D005485 2.5e-224 781.9 433 100.0
Oeu053166.1 Olea europaea HOM05D004485 ORTHO05D005485 1.5e-149 533.5 424 74.1
Dinv36695 Davidia involucrata HOM05D004485 ORTHO05D005485 3.1e-110 402.9 436 60.1
MSTRG.26380 Avicennia marina HOM05D004485 ORTHO05D005485 1.9e-107 393.7 425 57.6
CSS0002032 Camellia sinensis var. sinensis HOM05D004485 ORTHO05D005485 1.1e-104 384.4 426 58.9
CSS0009570 Camellia sinensis var. sinensis HOM05D004485 ORTHO05D005485 1.1e-104 384.4 426 58.9
Actinidia09445 Actinidia chinensis HOM05D004485 ORTHO05D005485 1.5e-101 374.0 438 57.1
Actinidia39786 Actinidia chinensis HOM05D004485 ORTHO05D005485 1.5e-101 374.0 439 56.9
Cc06_g10330 Coffea canephora HOM05D004485 ORTHO05D005485 5.9e-101 372.1 433 54.0
Actinidia17528 Actinidia chinensis HOM05D004485 ORTHO05D005485 1.3e-100 370.9 431 57.1
vmacro10859 Vaccinium macrocarpon HOM05D004485 ORTHO05D005485 1.6e-98 364.0 436 55.5
GSVIVG01015314001 Vitis vinifera HOM05D004485 ORTHO05D005485 2.7e-98 363.2 438 55.3
Nitab4.5_0000566g0170 Nicotiana tabacum HOM05D004485 ORTHO05D005485 3.9e-97 359.4 455 54.3
Migut.K00530 Erythranthe guttata HOM05D004485 ORTHO05D005485 9.7e-96 354.8 417 55.9
Haze_25812 Corylus avellana HOM05D004485 ORTHO05D005485 2.8e-95 353.2 442 54.1
Solyc12g008390.3 Solanum lycopersicum HOM05D004485 ORTHO05D005485 1.4e-94 350.9 449 52.6
Sopen12g003350 Solanum pennellii HOM05D004485 ORTHO05D005485 3.4e-93 346.3 449 52.3
QL02p042072 Quercus lobata HOM05D004485 ORTHO05D005485 4.5e-93 345.9 436 54.1
TAR624G1325 Trochodendron aralioides HOM05D004485 ORTHO05D005485 1.1e-91 341.3 437 54.7
CiPaw.03G226100 Carya illinoinensis HOM05D004485 ORTHO05D005485 4.2e-91 339.3 439 53.1
Nitab4.5_0013389g0010 Nicotiana tabacum HOM05D004485 ORTHO05D005485 2.3e-89 333.6 470 51.7
Hma1.2p1_0571F.1_g180870 Hydrangea macrophylla HOM05D004485 ORTHO05D005485 8.8e-89 331.6 436 53.2
CiPaw.04G158800 Carya illinoinensis HOM05D004485 ORTHO05D005485 1.1e-88 331.3 436 52.3
CAN.G1642.10 Capsicum annuum HOM05D004485 ORTHO05D005485 2.6e-88 330.1 440 51.4
Duzib187G1416 Durio zibethinus HOM05D004485 ORTHO05D005485 1.7e-87 327.4 436 53.7
Potri.018G086600 Populus trichocarpa HOM05D004485 ORTHO05D005485 4.8e-87 325.9 431 52.0
Atru.chr7.1446 Acer truncatum HOM05D004485 ORTHO05D005485 7.0e-86 322.0 438 52.5
Prupe.7G221400 Prunus persica HOM05D004485 ORTHO05D005485 7.0e-86 322.0 480 49.8
CANSAT56G2449 Cannabis sativa HOM05D004485 ORTHO05D005485 3.5e-85 319.7 432 51.2
Gohir.D08G263700 Gossypium hirsutum HOM05D004485 ORTHO05D005485 2.9e-84 316.6 444 51.1
Glyma.16G077500 Glycine max HOM05D004485 ORTHO05D005485 8.5e-84 315.1 441 51.0
Rhsim05G0040900 Rhododendron simsii HOM05D004485 ORTHO05D005485 1.1e-83 314.7 425 51.5
MD02G1064300 Malus domestica HOM05D004485 ORTHO05D005485 1.5e-83 314.3 440 52.3
Glyma.01G008900 Glycine max HOM05D004485 ORTHO05D005485 7.2e-83 312.0 441 50.1
Sabra18G0074900 Salix brachista HOM05D004485 ORTHO05D005485 1.2e-82 311.2 425 51.8
MD15G1195100 Malus domestica HOM05D004485 ORTHO05D005485 2.7e-82 310.1 446 50.9
Nn8g39096 Nelumbo nucifera HOM05D004485 ORTHO05D005485 2.7e-82 310.1 438 49.8
Thecc.09G101900 Theobroma cacao HOM05D004485 ORTHO05D005485 1.8e-81 307.4 437 51.5
TWI34G0799 Tripterygium wilfordii HOM05D004485 ORTHO05D005485 2.3e-81 307.0 452 49.3
Ciclev10007632m.g Citrus clementina HOM05D004485 ORTHO05D005485 3.0e-81 306.6 437 52.2
Sc08g0007920 Simmondsia chinensis HOM05D004485 ORTHO05D005485 3.0e-81 306.6 432 51.6
Duzib168G0844 Durio zibethinus HOM05D004485 ORTHO05D005485 2.2e-79 300.4 433 51.3
Eucgr.C01004 Eucalyptus grandis HOM05D004485 ORTHO05D005485 8.2e-79 298.5 435 49.4
Gohir.A08G242800 Gossypium hirsutum HOM05D004485 ORTHO05D005485 5.3e-78 295.8 444 48.9
Lalb_Chr14g0371821 Lupinus albus HOM05D004485 ORTHO05D005485 7.0e-78 295.4 433 50.1
EL10Ac8g18398 Beta vulgaris HOM05D004485 ORTHO05D005485 1.6e-77 294.3 438 48.4
DCAR_012046 Daucus carota HOM05D004485 ORTHO05D005485 3.5e-77 293.1 386 53.4
Gohir.D06G065100 Gossypium hirsutum HOM05D004485 ORTHO05D005485 1.3e-76 291.2 436 50.0
Gohir.A06G066600 Gossypium hirsutum HOM05D004485 ORTHO05D005485 2.2e-76 290.4 436 49.5
Hund29368 Selenicereus undatus HOM05D004485 ORTHO05D005485 1.9e-75 287.3 421 49.9
MBI01_g35400_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 7.2e-75 285.4 441 48.8
Hund29369 Selenicereus undatus HOM05D004485 ORTHO05D005485 1.6e-74 284.3 421 49.6
MBI07_g22518_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 8.8e-73 278.5 442 47.5
PSO210G4150 Papaver somniferum HOM05D004485 ORTHO05D005485 2.6e-72 276.9 446 48.2
MELO3C004583.2 Cucumis melo HOM05D004485 ORTHO05D005485 7.5e-72 275.4 440 45.5
ClCG11G002190 Citrullus lanatus HOM05D004485 ORTHO05D005485 9.8e-72 275.0 454 45.6
CsaV3_2G001970 Cucumis sativus L. HOM05D004485 ORTHO05D005485 3.7e-71 273.1 440 45.5
Sed0011847 Sechium edule HOM05D004485 ORTHO05D005485 4.1e-70 269.6 457 44.9
Gorai.004G281700 Gossypium raimondii HOM05D004485 ORTHO05D005485 5.4e-70 269.2 278 62.2
A09p12650 Brassica napus HOM05D004485 ORTHO05D005485 2.0e-69 267.3 444 46.4
BolC9t54403H Brassica oleracea HOM05D004485 ORTHO05D005485 1.3e-68 264.6 451 46.3
AT2G19950 Arabidopsis thaliana HOM05D004485 ORTHO05D005485 1.7e-68 264.2 445 47.0
BraA09t36912Z Brassica rapa HOM05D004485 ORTHO05D005485 1.7e-68 264.2 444 46.2
AL3G48250 Arabidopsis lyrata HOM05D004485 ORTHO05D005485 2.2e-68 263.8 445 45.4
arahy.Tifrunner.gnm1.ann1.N3ID59 Arachis hypogaea HOM05D004485 ORTHO05D005485 2.2e-68 263.8 437 47.6
Manes.16G110100 Manihot esculenta HOM05D004485 ORTHO05D005485 2.9e-68 263.5 329 57.4
Lalb_Chr24g0397331 Lupinus albus HOM05D004485 ORTHO05D005485 3.8e-68 263.1 426 46.2
BcaC04g22803 Brassica carinata HOM05D004485 ORTHO05D005485 8.5e-68 261.9 446 46.2
C09p15010 Brassica napus HOM05D004485 ORTHO05D005485 8.5e-68 261.9 446 46.2
Thhalv10001922m.g Eutrema salsugineum HOM05D004485 ORTHO05D005485 1.9e-67 260.8 441 45.4
FAN19G2910 Fragaria x ananassa HOM05D004485 ORTHO05D005485 4.2e-67 259.6 450 46.2
Peaxi162Scf00665g00331 Petunia axillaris HOM05D004485 ORTHO05D005485 4.7e-66 256.1 509 41.3
arahy.Tifrunner.gnm1.ann1.8771PM Arachis hypogaea HOM05D004485 ORTHO05D005485 2.3e-65 253.8 441 46.3
arahy.Tifrunner.gnm1.ann1.96JC9B Arachis hypogaea HOM05D004485 ORTHO05D005485 1.5e-64 251.1 454 43.6
arahy.Tifrunner.gnm1.ann1.TC5UZA Arachis hypogaea HOM05D004485 ORTHO05D005485 4.4e-64 249.6 452 43.8
PSO210G3171 Papaver somniferum HOM05D004485 ORTHO05D005485 7.5e-64 248.8 448 47.1
BcaNung04089 Brassica carinata HOM05D004485 ORTHO05D005485 1.3e-63 248.1 438 41.8
ATR0705G155 Amborella trichopoda HOM05D004485 ORTHO05D005485 3.7e-63 246.5 441 44.2
COL.COLO4_34764 Corchorus olitorius HOM05D004485 ORTHO05D005485 3.7e-63 246.5 432 46.1
PGR102G0995 Punica granatum HOM05D004485 ORTHO05D005485 1.8e-62 244.2 449 45.2
Lsat_1_v5_gn_8_96840 Lactuca sativa HOM05D004485 ORTHO05D005485 3.1e-62 243.4 459 44.9
Carub.0003s3420 Capsella rubella HOM05D004485 ORTHO05D005485 3.8e-60 236.5 447 42.5
unitig_899.g15433 Utricularia gibba HOM05D004485 ORTHO05D005485 1.1e-59 235.0 432 43.1
AUR62021427 Chenopodium quinoa HOM05D004485 ORTHO05D005485 7.2e-59 232.3 455 43.5
Os01g0744400 Oryza sativa ssp. japonica HOM05D004485 ORTHO05D005485 9.5e-59 231.9 437 41.6
Psat1g046640 Pisum sativum HOM05D004485 ORTHO05D005485 1.2e-58 231.5 429 44.3
Zm00001eb153530 Zea mays HOM05D004485 ORTHO05D005485 1.2e-58 231.5 431 42.9
Lj2g0014691 Lotus japonicus HOM05D004485 ORTHO05D005485 4.0e-57 226.5 433 42.0
Zm00001eb371090 Zea mays HOM05D004485 ORTHO05D005485 3.4e-56 223.4 432 41.4
Phvul.004G170300 Phaseolus vulgaris HOM05D004485 ORTHO05D005485 5.7e-56 222.6 432 41.7
SEGI_40884 Sequoiadendron giganteum HOM05D004485 ORTHO05D005485 2.9e-55 220.3 468 38.2
Gorai.010G076200 Gossypium raimondii HOM05D004485 ORTHO05D005485 2.4e-54 217.2 436 42.9
VMungo0464G1472 Vigna mungo HOM05D004485 ORTHO05D005485 5.9e-53 212.6 432 41.9
HPP92_005563 Vanilla planifolia HOM05D004485 ORTHO05D005485 3.9e-52 209.9 186 67.7
Aqoxy7G03881 Aquilegia oxysepala HOM05D004485 ORTHO05D005485 1.1e-51 208.4 449 40.8
CARHR110390 Cardamine hirsuta HOM05D004485 ORTHO05D005485 2.3e-49 200.7 448 40.0
Aa31LG8G16840 Aethionema arabicum HOM05D004485 ORTHO05D005485 1.5e-48 198.0 470 37.7
SGA_v2.0_scaffold129G34191 Striga asiatica HOM05D004485 ORTHO05D005485 2.6e-48 197.2 138 79.7
ECA236G0540 Erigeron canadensis HOM05D004485 ORTHO05D005485 1.7e-47 194.5 432 39.1
SHI02696 Sapria himalayana HOM05D004485 ORTHO05D005485 1.7e-47 194.5 397 40.3
Ca_25562_v3 Cicer arietinum L. HOM05D004485 ORTHO05D005485 7.0e-46 189.1 437 38.7
Cpa.g.sc40.63 Carica papaya HOM05D004485 ORTHO05D005485 1.6e-45 188.0 421 40.1
AUR62010900 Chenopodium quinoa HOM05D004485 ORTHO05D005485 1.7e-44 184.5 467 37.9
Medtr6g088595 Medicago truncatula HOM05D004485 ORTHO05D005485 9.5e-43 178.7 435 36.8
CDE04G3494 Ceratophyllum demersum HOM05D004485 ORTHO05D005485 6.2e-42 176.0 430 37.0
RcHm_v2.0_Chr2g0091661 Rosa chinensis HOM05D004485 ORTHO05D005485 3.1e-41 173.7 460 38.7
arahy.Tifrunner.gnm1.ann1.SL9UG3 Arachis hypogaea HOM05D004485 ORTHO05D005485 5.2e-41 172.9 236 53.8
TPR.G21387 Trifolium pratense HOM05D004485 ORTHO05D005485 4.4e-40 169.9 428 37.1
FvH4_1g05970 Fragaria vesca HOM05D004485 ORTHO05D005485 2.4e-38 164.1 450 37.1
FAN28G2435 Fragaria x ananassa HOM05D004485 ORTHO05D005485 3.2e-38 163.7 457 37.2
HanXRQChr12g0358161 Helianthus annuus HOM05D004485 ORTHO05D005485 5.4e-38 162.9 483 35.0
FAN26G0748 Fragaria x ananassa HOM05D004485 ORTHO05D005485 7.1e-38 162.5 453 37.1
FAN26G2333 Fragaria x ananassa HOM05D004485 ORTHO05D005485 7.1e-38 162.5 453 37.3
AagrBONN_evm.TU.Sc2ySwM_368.430 Anthoceros agrestis HOM05D004485 ORTHO05D005485 3.9e-36 156.8 457 34.6
FAN23G2550 Fragaria x ananassa HOM05D004485 ORTHO05D005485 1.4e-33 148.3 443 36.1
Sp3g33270 Schrenkiella parvula HOM05D004485 ORTHO05D005485 1.8e-33 147.9 443 34.3
THA.LOC104820040 Tarenaya hassleriana HOM05D004485 ORTHO05D005485 5.2e-33 146.4 441 35.6
CBR_g39203 Chara braunii HOM05D004485 ORTHO05D005485 1.2e-32 145.2 166 50.0
SMO356G0242 Selaginella moellendorffii HOM05D004485 ORTHO05D005485 5.1e-28 129.8 213 42.3
Ah.14g083300 Amaranthus hybridus HOM05D004485 ORTHO05D005485 2.5e-27 127.5 137 59.9
SMO140G0037 Selaginella moellendorffii HOM05D004485 ORTHO05D005485 3.1e-25 120.6 231 38.1
Rhsim05G0040800 Rhododendron simsii HOM05D000602 ORTHO05D001147 1.5e-24 118.2 153 54.9
BcaC06g36663 Brassica carinata HOM05D004485 ORTHO05D005485 5.8e-24 116.3 108 64.8
A07p00710 Brassica napus HOM05D004485 ORTHO05D005485 6.9e-17 92.8 112 53.6
C07p01440 Brassica napus HOM05D004485 ORTHO05D005485 9.6e-11 72.4 92 50.0
ATR0693G380 Amborella trichopoda HOM05D004485 ORTHO05D005485 8.1e-10 69.3 77 55.8
CDE02G3418 Ceratophyllum demersum HOM05D004485 ORTHO05D005485 8.1e-10 69.3 306 30.7
Cre12.g517500 Chlamydomonas reinhardtii HOM05D004485 ORTHO05D005485 3.2e-06 57.4 141 31.9
BraA07t27870Z Brassica rapa HOM05D004485 ORTHO05D005485 9.3e-06 55.8 64 56.2


User provided reference genes

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