Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064192.1 Olea europaea HOM05D004485 ORTHO05D005485 4.2e-151 538.1 295 100.0
Oeu053166.1 Olea europaea HOM05D004485 ORTHO05D005485 9.8e-100 367.5 236 88.6
Migut.K00530 Erythranthe guttata HOM05D004485 ORTHO05D005485 9.2e-98 360.9 236 86.9
MD15G1195100 Malus domestica HOM05D004485 ORTHO05D005485 6.6e-96 354.8 236 84.3
Dinv36695 Davidia involucrata HOM05D004485 ORTHO05D005485 2.5e-95 352.8 236 83.9
Nitab4.5_0013389g0010 Nicotiana tabacum HOM05D004485 ORTHO05D005485 4.3e-95 352.1 244 82.4
Glyma.01G008900 Glycine max HOM05D004485 ORTHO05D005485 9.5e-95 350.9 236 82.6
Prupe.7G221400 Prunus persica HOM05D004485 ORTHO05D005485 1.2e-94 350.5 236 83.5
QL02p042072 Quercus lobata HOM05D004485 ORTHO05D005485 2.8e-94 349.4 236 83.5
Thecc.09G101900 Theobroma cacao HOM05D004485 ORTHO05D005485 4.7e-94 348.6 236 83.1
Peaxi162Scf00665g00331 Petunia axillaris HOM05D004485 ORTHO05D005485 8.1e-94 347.8 240 81.7
Manes.16G110100 Manihot esculenta HOM05D004485 ORTHO05D005485 1.4e-93 347.1 236 82.6
CSS0002032 Camellia sinensis var. sinensis HOM05D004485 ORTHO05D005485 1.8e-93 346.7 236 82.6
Glyma.16G077500 Glycine max HOM05D004485 ORTHO05D005485 3.1e-93 345.9 236 81.4
Actinidia09445 Actinidia chinensis HOM05D004485 ORTHO05D005485 4.0e-93 345.5 236 81.8
Phvul.004G170300 Phaseolus vulgaris HOM05D004485 ORTHO05D005485 4.0e-93 345.5 236 80.5
Sabra18G0074900 Salix brachista HOM05D004485 ORTHO05D005485 4.0e-93 345.5 236 82.6
CANSAT56G2449 Cannabis sativa HOM05D004485 ORTHO05D005485 5.2e-93 345.1 236 83.1
Medtr6g088595 Medicago truncatula HOM05D004485 ORTHO05D005485 6.8e-93 344.7 236 80.9
Sc08g0007920 Simmondsia chinensis HOM05D004485 ORTHO05D005485 6.8e-93 344.7 240 82.5
Atru.chr7.1446 Acer truncatum HOM05D004485 ORTHO05D005485 1.2e-92 344.0 237 82.7
Nn8g39096 Nelumbo nucifera HOM05D004485 ORTHO05D005485 1.2e-92 344.0 236 81.4
CiPaw.04G158800 Carya illinoinensis HOM05D004485 ORTHO05D005485 1.5e-92 343.6 239 82.0
Actinidia17528 Actinidia chinensis HOM05D004485 ORTHO05D005485 2.6e-92 342.8 236 81.4
Lj2g0014691 Lotus japonicus HOM05D004485 ORTHO05D005485 2.6e-92 342.8 236 80.9
SGA_v2.0_scaffold129G34191 Striga asiatica HOM05D004485 ORTHO05D005485 2.6e-92 342.8 228 83.8
TAR624G1325 Trochodendron aralioides HOM05D004485 ORTHO05D005485 5.8e-92 341.7 236 80.5
Ciclev10007632m.g Citrus clementina HOM05D004485 ORTHO05D005485 7.5e-92 341.3 236 81.4
Gohir.D08G263700 Gossypium hirsutum HOM05D004485 ORTHO05D005485 7.5e-92 341.3 236 80.9
MD02G1064300 Malus domestica HOM05D004485 ORTHO05D005485 7.5e-92 341.3 236 82.2
GSVIVG01015314001 Vitis vinifera HOM05D004485 ORTHO05D005485 7.5e-92 341.3 236 81.8
Gorai.004G281700 Gossypium raimondii HOM05D004485 ORTHO05D005485 9.9e-92 340.9 236 80.9
RcHm_v2.0_Chr2g0091661 Rosa chinensis HOM05D004485 ORTHO05D005485 1.7e-91 340.1 236 81.8
TPR.G21387 Trifolium pratense HOM05D004485 ORTHO05D005485 1.7e-91 340.1 236 79.7
FAN26G2333 Fragaria x ananassa HOM05D004485 ORTHO05D005485 3.7e-91 339.0 236 81.8
Solyc12g008390.3 Solanum lycopersicum HOM05D004485 ORTHO05D005485 4.9e-91 338.6 240 80.8
FAN26G0748 Fragaria x ananassa HOM05D004485 ORTHO05D005485 8.3e-91 337.8 236 81.4
Sed0011847 Sechium edule HOM05D004485 ORTHO05D005485 1.1e-90 337.4 236 80.1
Duzib168G0844 Durio zibethinus HOM05D004485 ORTHO05D005485 1.4e-90 337.0 236 80.1
Hma1.2p1_0571F.1_g180870 Hydrangea macrophylla HOM05D004485 ORTHO05D005485 1.4e-90 337.0 235 81.3
THA.LOC104820040 Tarenaya hassleriana HOM05D004485 ORTHO05D005485 1.4e-90 337.0 236 80.5
VMungo0464G1472 Vigna mungo HOM05D004485 ORTHO05D005485 1.4e-90 337.0 236 78.8
FvH4_1g05970 Fragaria vesca HOM05D004485 ORTHO05D005485 1.9e-90 336.7 236 80.9
CiPaw.03G226100 Carya illinoinensis HOM05D004485 ORTHO05D005485 2.4e-90 336.3 236 80.9
Lalb_Chr24g0397331 Lupinus albus HOM05D004485 ORTHO05D005485 2.4e-90 336.3 236 80.1
MSTRG.26380 Avicennia marina HOM05D004485 ORTHO05D005485 3.2e-90 335.9 238 81.5
Sopen12g003350 Solanum pennellii HOM05D004485 ORTHO05D005485 3.2e-90 335.9 240 80.0
CsaV3_2G001970 Cucumis sativus L. HOM05D004485 ORTHO05D005485 4.1e-90 335.5 237 80.6
MELO3C004583.2 Cucumis melo HOM05D004485 ORTHO05D005485 5.4e-90 335.1 237 80.6
FAN19G2910 Fragaria x ananassa HOM05D004485 ORTHO05D005485 5.4e-90 335.1 236 80.5
Ca_25562_v3 Cicer arietinum L. HOM05D004485 ORTHO05D005485 1.6e-89 333.6 236 78.8
Eucgr.C01004 Eucalyptus grandis HOM05D004485 ORTHO05D005485 2.1e-89 333.2 236 79.7
Psat1g046640 Pisum sativum HOM05D004485 ORTHO05D005485 2.1e-89 333.2 236 78.4
PSO210G4150 Papaver somniferum HOM05D004485 ORTHO05D005485 2.7e-89 332.8 236 77.5
Gohir.A08G242800 Gossypium hirsutum HOM05D004485 ORTHO05D005485 3.5e-89 332.4 236 80.5
Lalb_Chr14g0371821 Lupinus albus HOM05D004485 ORTHO05D005485 7.8e-89 331.3 236 78.4
Potri.018G086600 Populus trichocarpa HOM05D004485 ORTHO05D005485 1.3e-88 330.5 245 78.0
PSO210G3171 Papaver somniferum HOM05D004485 ORTHO05D005485 1.7e-88 330.1 236 77.1
HanXRQChr12g0358161 Helianthus annuus HOM05D004485 ORTHO05D005485 2.3e-88 329.7 238 78.2
Lsat_1_v5_gn_8_96840 Lactuca sativa HOM05D004485 ORTHO05D005485 3.9e-88 328.9 265 73.6
FAN23G2550 Fragaria x ananassa HOM05D004485 ORTHO05D005485 5.1e-88 328.6 246 77.6
FAN28G2435 Fragaria x ananassa HOM05D004485 ORTHO05D005485 5.1e-88 328.6 246 77.6
ECA236G0540 Erigeron canadensis HOM05D004485 ORTHO05D005485 6.6e-88 328.2 236 77.1
Aqoxy7G03881 Aquilegia oxysepala HOM05D004485 ORTHO05D005485 2.5e-87 326.2 237 77.6
Aa31LG8G16840 Aethionema arabicum HOM05D004485 ORTHO05D005485 4.3e-87 325.5 236 76.7
EL10Ac8g18398 Beta vulgaris HOM05D004485 ORTHO05D005485 9.5e-87 324.3 236 77.5
Thhalv10001922m.g Eutrema salsugineum HOM05D004485 ORTHO05D005485 2.8e-86 322.8 236 76.7
Carub.0003s3420 Capsella rubella HOM05D004485 ORTHO05D005485 3.6e-86 322.4 236 76.7
HPP92_005563 Vanilla planifolia HOM05D004485 ORTHO05D005485 3.6e-86 322.4 236 75.4
BcaNung04089 Brassica carinata HOM05D004485 ORTHO05D005485 1.8e-85 320.1 236 75.8
TWI34G0799 Tripterygium wilfordii HOM05D004485 ORTHO05D005485 2.4e-85 319.7 237 78.5
CSS0009570 Camellia sinensis var. sinensis HOM05D004485 ORTHO05D005485 3.1e-85 319.3 236 78.0
BolC9t54403H Brassica oleracea HOM05D004485 ORTHO05D005485 5.2e-85 318.5 236 75.4
C09p15010 Brassica napus HOM05D004485 ORTHO05D005485 2.0e-84 316.6 236 75.0
AUR62021427 Chenopodium quinoa HOM05D004485 ORTHO05D005485 2.0e-84 316.6 236 75.0
A09p12650 Brassica napus HOM05D004485 ORTHO05D005485 3.4e-84 315.8 236 75.0
BraA09t36912Z Brassica rapa HOM05D004485 ORTHO05D005485 3.4e-84 315.8 236 75.0
Gohir.A06G066600 Gossypium hirsutum HOM05D004485 ORTHO05D005485 3.4e-84 315.8 236 76.3
Sp3g33270 Schrenkiella parvula HOM05D004485 ORTHO05D005485 3.4e-84 315.8 236 75.4
unitig_899.g15433 Utricularia gibba HOM05D004485 ORTHO05D005485 7.6e-84 314.7 236 75.4
PGR102G0995 Punica granatum HOM05D004485 ORTHO05D005485 4.9e-83 312.0 236 75.8
CARHR110390 Cardamine hirsuta HOM05D004485 ORTHO05D005485 2.4e-82 309.7 239 74.1
Os01g0744400 Oryza sativa ssp. japonica HOM05D004485 ORTHO05D005485 1.2e-81 307.4 236 72.9
Gorai.010G076200 Gossypium raimondii HOM05D004485 ORTHO05D005485 2.7e-81 306.2 265 68.7
AL3G48250 Arabidopsis lyrata HOM05D004485 ORTHO05D005485 6.0e-81 305.1 236 73.3
AT2G19950 Arabidopsis thaliana HOM05D004485 ORTHO05D005485 1.0e-80 304.3 236 72.9
Duzib187G1416 Durio zibethinus HOM05D004485 ORTHO05D005485 1.3e-80 303.9 236 75.4
Zm00001eb371090 Zea mays HOM05D004485 ORTHO05D005485 1.7e-80 303.5 236 71.6
Ah.14g083300 Amaranthus hybridus HOM05D004485 ORTHO05D005485 3.9e-80 302.4 251 69.7
CDE04G3494 Ceratophyllum demersum HOM05D004485 ORTHO05D005485 1.1e-79 300.8 236 71.2
Rhsim05G0040900 Rhododendron simsii HOM05D004485 ORTHO05D005485 1.5e-79 300.4 271 67.2
COL.COLO4_34764 Corchorus olitorius HOM05D004485 ORTHO05D005485 2.5e-79 299.7 236 74.2
Zm00001eb153530 Zea mays HOM05D004485 ORTHO05D005485 2.5e-79 299.7 236 71.2
Gohir.D06G065100 Gossypium hirsutum HOM05D004485 ORTHO05D005485 7.3e-79 298.1 236 74.6
ATR0705G155 Amborella trichopoda HOM05D004485 ORTHO05D005485 2.8e-78 296.2 237 71.7
Haze_25812 Corylus avellana HOM05D004485 ORTHO05D005485 8.1e-78 294.7 203 81.8
CAN.G1642.10 Capsicum annuum HOM05D004485 ORTHO05D005485 1.4e-77 293.9 240 72.1
arahy.Tifrunner.gnm1.ann1.8771PM Arachis hypogaea HOM05D004485 ORTHO05D005485 1.7e-75 287.0 242 68.6
MBI07_g22518_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 1.4e-74 283.9 236 69.1
ClCG11G002190 Citrullus lanatus HOM05D004485 ORTHO05D005485 2.4e-74 283.1 245 68.6
Actinidia39785 Actinidia chinensis HOM05D004485 ORTHO05D005485 1.2e-73 280.8 201 78.6
arahy.Tifrunner.gnm1.ann1.N3ID59 Arachis hypogaea HOM05D004485 ORTHO05D005485 8.7e-72 274.6 244 65.6
Nitab4.5_0000566g0170 Nicotiana tabacum HOM05D004485 ORTHO05D005485 2.0e-68 263.5 240 68.8
SEGI_40884 Sequoiadendron giganteum HOM05D004485 ORTHO05D005485 9.9e-68 261.2 237 64.6
vmacro10859 Vaccinium macrocarpon HOM05D004485 ORTHO05D005485 3.8e-67 259.2 187 80.7
Hund28808 Selenicereus undatus HOM05D004485 ORTHO05D005485 9.3e-66 254.6 185 77.3
Hund28810 Selenicereus undatus HOM05D004485 ORTHO05D005485 9.3e-66 254.6 185 77.3
AUR62010900 Chenopodium quinoa HOM05D004485 ORTHO05D005485 1.5e-63 247.3 187 75.9
Potri.006G164350 Populus trichocarpa HOM05D004485 ORTHO05D005485 1.9e-63 246.9 182 78.0
MBI07_g30871_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 5.6e-63 245.4 203 70.0
Cc06_g10340 Coffea canephora HOM05D004485 ORTHO05D005485 2.8e-62 243.0 153 84.3
MBI01_g35400_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 3.7e-62 242.7 243 61.7
arahy.Tifrunner.gnm1.ann1.96JC9B Arachis hypogaea HOM05D004485 ORTHO05D005485 3.2e-58 229.6 235 60.9
CDE02G0772 Ceratophyllum demersum HOM05D004485 ORTHO05D005485 4.6e-57 225.7 189 70.4
BcaC04g22803 Brassica carinata HOM05D004485 ORTHO05D005485 1.6e-54 217.2 161 78.9
arahy.Tifrunner.gnm1.ann1.TC5UZA Arachis hypogaea HOM05D004485 ORTHO05D005485 5.3e-53 212.2 236 56.8
AagrBONN_evm.TU.Sc2ySwM_368.430 Anthoceros agrestis HOM05D004485 ORTHO05D005485 4.6e-49 199.1 237 53.2
Cpa.g.sc40.65 Carica papaya HOM05D004485 ORTHO05D005485 3.3e-39 166.4 97 90.7
Cpa.g.sc40.64 Carica papaya HOM05D004485 ORTHO05D005485 5.0e-27 125.9 96 76.0
SMO356G0242 Selaginella moellendorffii HOM05D004485 ORTHO05D005485 2.5e-26 123.6 300 39.3
Cc06_g10330 Coffea canephora HOM05D004485 ORTHO05D005485 4.7e-25 119.4 81 82.7
SalBow3G4580 Salvia bowleyana HOM05D004485 ORTHO05D005485 4.7e-25 119.4 79 79.7
PGR102G1041 Punica granatum HOM05D004485 ORTHO05D005485 1.6e-20 104.4 97 66.0
Gohir.D04G126400 Gossypium hirsutum HOM05D004485 ORTHO05D005485 1.9e-18 97.4 80 72.5
Gohir.D05G357440 Gossypium hirsutum HOM05D004485 ORTHO05D005485 1.9e-18 97.4 80 72.5
Gohir.D05G357788 Gossypium hirsutum HOM05D004485 ORTHO05D005485 1.9e-18 97.4 80 72.5
CBR_g39203 Chara braunii HOM05D004485 ORTHO05D005485 7.2e-18 95.5 237 35.9
Sc08g0007940 Simmondsia chinensis HOM05D004485 ORTHO05D005485 9.4e-18 95.1 173 45.7
Gorai.003G091600 Gossypium raimondii HOM05D004485 ORTHO05D005485 1.2e-17 94.7 82 68.3
Gohir.D01G081701 Gossypium hirsutum HOM05D004485 ORTHO05D005485 6.8e-16 89.0 80 71.2
Hund29368 Selenicereus undatus HOM05D004485 ORTHO05D005485 7.5e-15 85.5 59 86.4
Hund29369 Selenicereus undatus HOM05D004485 ORTHO05D005485 7.5e-15 85.5 59 86.4
HPP92_005577 Vanilla planifolia HOM05D004485 ORTHO05D005485 3.5e-12 76.6 65 64.6
BcaC06g36663 Brassica carinata HOM05D004485 ORTHO05D005485 4.5e-12 76.3 90 51.1
HanXRQChr10g0316161 Helianthus annuus HOM05D004485 ORTHO05D005485 5.2e-08 62.8 50 74.0
A07p00710 Brassica napus HOM05D004485 ORTHO05D005485 2.0e-07 60.8 141 35.5
Rhsim05G0040800 Rhododendron simsii HOM05D000602 ORTHO05D001147 2.6e-07 60.5 45 66.7
HanXRQChr03g0072061 Helianthus annuus HOM05D004485 ORTHO05D005485 4.8e-06 56.2 40 67.5


User provided reference genes

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