Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 1.1e-311 1072.4 520 100.0
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 3.3e-268 927.9 520 85.6
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 1.7e-267 925.6 520 84.0
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.1e-266 921.0 518 84.6
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 1.0e-264 916.4 521 84.1
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 6.1e-262 907.1 518 83.8
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.8e-261 905.6 554 78.7
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 2.3e-261 905.2 520 82.7
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 6.7e-261 903.7 520 81.5
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 1.7e-259 899.0 517 83.0
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 1.7e-259 899.0 520 82.1
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 4.1e-258 894.4 520 82.1
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 1.0e-256 889.8 530 80.9
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 1.7e-256 889.0 516 82.2
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 1.1e-255 886.3 520 81.0
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 1.9e-255 885.6 520 81.5
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 4.2e-255 884.4 520 81.3
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 2.1e-254 882.1 518 80.9
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 1.0e-253 879.8 520 80.2
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 1.8e-253 879.0 520 80.4
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 2.3e-253 878.6 520 81.9
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 3.0e-253 878.2 520 80.0
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 8.8e-253 876.7 519 80.2
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 8.8e-253 876.7 519 80.2
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 8.8e-253 876.7 520 80.4
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 8.8e-253 876.7 520 79.4
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 1.5e-252 875.9 520 80.2
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 2.6e-252 875.2 515 81.0
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 5.7e-252 874.0 520 79.2
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 7.4e-252 873.6 516 79.5
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 9.7e-252 873.2 520 80.8
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 1.3e-251 872.8 518 81.3
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 1.3e-251 872.8 521 80.6
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 2.8e-251 871.7 516 80.6
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 3.7e-251 871.3 516 79.3
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 1.8e-250 869.0 516 80.4
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 5.3e-250 867.5 520 78.3
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 5.3e-250 867.5 520 80.0
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 1.6e-249 865.9 519 79.4
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 2.0e-249 865.5 516 80.2
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 2.0e-249 865.5 515 79.8
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 3.5e-249 864.8 518 80.9
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 7.7e-249 863.6 520 79.0
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 7.7e-249 863.6 520 80.8
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 1.0e-248 863.2 520 80.6
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 1.7e-248 862.4 521 81.0
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 2.2e-248 862.1 521 78.7
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 5.0e-248 860.9 517 80.5
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 6.5e-248 860.5 544 76.1
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 8.5e-248 860.1 520 80.2
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 8.5e-248 860.1 518 78.4
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 1.5e-247 859.4 521 78.3
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 1.9e-247 859.0 544 75.6
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 2.5e-247 858.6 521 79.5
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 3.2e-247 858.2 520 79.4
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 4.2e-247 857.8 520 79.4
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 3.6e-246 854.7 520 77.7
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 3.6e-246 854.7 515 78.8
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 4.7e-246 854.4 525 78.3
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 6.1e-246 854.0 521 77.2
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 6.1e-246 854.0 520 78.1
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 6.1e-246 854.0 520 78.1
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 8.0e-246 853.6 520 76.9
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 1.8e-245 852.4 520 77.9
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 4.0e-245 851.3 521 77.5
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 4.0e-245 851.3 525 77.9
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 6.8e-245 850.5 521 77.7
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 6.8e-245 850.5 525 77.9
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 8.8e-245 850.1 521 77.5
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.5e-244 849.4 525 77.9
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 2.6e-244 848.6 516 78.1
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 3.4e-244 848.2 521 78.1
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 3.4e-244 848.2 519 79.0
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 5.7e-244 847.4 466 86.3
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 9.7e-244 846.7 518 79.2
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 9.7e-244 846.7 521 77.4
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 2.8e-243 845.1 521 77.5
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 6.3e-243 844.0 521 76.4
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 8.3e-243 843.6 521 76.2
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 8.3e-243 843.6 521 76.4
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 8.3e-243 843.6 521 76.4
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 8.3e-243 843.6 513 78.4
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.1e-242 843.2 530 76.4
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 1.8e-242 842.4 521 76.4
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 1.8e-242 842.4 520 76.3
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 2.4e-242 842.0 520 76.5
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 4.1e-242 841.3 521 75.8
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 5.3e-242 840.9 521 77.0
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 7.0e-242 840.5 520 76.2
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 7.0e-242 840.5 520 76.2
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 7.0e-242 840.5 520 77.9
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 1.6e-241 839.3 526 75.7
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 2.7e-241 838.6 520 76.2
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 5.9e-241 837.4 492 80.3
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 7.7e-241 837.0 516 76.9
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 7.7e-241 837.0 516 76.9
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 3.8e-240 834.7 517 77.0
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 5.5e-239 830.9 519 75.9
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 9.4e-239 830.1 516 77.9
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 2.7e-238 828.6 464 84.7
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 2.7e-238 828.6 514 75.5
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 4.0e-237 824.7 520 76.0
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 4.4e-236 821.2 524 76.1
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 2.8e-235 818.5 519 75.0
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 1.1e-234 816.6 519 75.1
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 1.1e-234 816.6 573 70.7
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 1.4e-234 816.2 552 73.4
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 5.9e-233 810.8 518 73.9
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 2.9e-232 808.5 520 75.4
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 3.3e-231 805.1 520 74.6
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 3.3e-231 805.1 522 73.0
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 1.2e-230 803.1 520 74.8
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 2.1e-230 802.4 469 80.6
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 2.8e-230 802.0 520 75.2
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 6.1e-230 800.8 520 76.2
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 1.0e-229 800.0 516 74.0
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 1.8e-229 799.3 519 74.2
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 3.0e-229 798.5 517 75.0
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 3.0e-229 798.5 516 73.8
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 4.0e-229 798.1 521 74.9
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 1.2e-228 796.6 516 73.8
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 1.3e-227 793.1 464 81.2
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 2.4e-226 788.9 490 77.8
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 2.4e-226 788.9 553 70.7
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 2.0e-225 785.8 521 72.4
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 2.7e-225 785.4 470 78.5
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 4.5e-225 784.6 476 77.7
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 7.8e-225 783.9 475 78.3
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 4.3e-223 778.1 466 78.8
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 3.6e-222 775.0 519 71.9
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 1.3e-219 766.5 520 70.6
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 6.4e-219 764.2 520 70.4
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 1.4e-218 763.1 518 71.2
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 7.0e-218 760.8 520 70.0
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 3.5e-217 758.4 520 69.8
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 1.0e-216 756.9 561 68.6
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 5.8e-212 741.1 520 70.2
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 4.9e-211 738.0 540 67.4
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 2.5e-207 725.7 508 73.4
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 2.5e-207 725.7 519 69.9
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 1.9e-202 709.5 520 66.9
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 7.8e-193 677.6 380 85.5
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 4.0e-189 665.2 480 68.1
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 3.8e-187 658.7 480 68.5
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 3.2e-186 655.6 382 80.4
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 1.2e-180 637.1 375 79.2
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 3.0e-176 622.5 553 59.0
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 8.1e-174 614.4 486 60.7
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 6.0e-169 598.2 446 61.0
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 9.7e-159 564.3 476 56.7
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 6.3e-158 561.6 502 55.4
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 1.1e-149 534.3 352 74.1
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 4.4e-135 485.7 288 81.6
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 5.9e-132 475.3 293 77.8
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 3.2e-130 469.5 289 79.6
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 7.2e-130 468.4 291 77.0
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 9.8e-127 458.0 286 75.5
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 1.1e-125 454.5 265 78.1
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 8.6e-107 391.7 250 72.8
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 6.0e-100 369.0 244 73.4
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 6.0e-84 315.8 204 75.5
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 4.3e-58 229.9 404 34.4
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 1.4e-53 214.9 132 75.0
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 2.3e-51 207.6 469 30.7
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.2e-45 186.8 203 49.8
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 1.9e-42 177.9 100 83.0
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 1.3e-38 165.2 141 55.3
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 2.0e-26 124.8 86 72.1
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 8.5e-22 109.4 59 81.4
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.2e-21 107.5 142 48.6
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 5.2e-19 100.1 60 76.7
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 9.7e-18 95.9 148 36.5
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 6.5e-14 83.2 171 39.2
CAN.G195.50 Capsicum annuum HOM05D003954 ORTHO05D004627 9.1e-08 62.8 65 52.3


User provided reference genes

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