Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 7.3e-26 119.8 60 100.0
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 3.6e-17 90.9 53 79.2
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 8.1e-17 89.7 55 72.7
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 8.1e-17 89.7 55 74.5
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 1.1e-16 89.4 55 78.2
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 1.4e-16 89.0 55 76.4
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 1.4e-16 89.0 59 67.8
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 1.4e-16 89.0 57 68.4
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 2.3e-16 88.2 56 75.0
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 4.0e-16 87.4 56 73.2
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 6.8e-16 86.7 53 77.4
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 6.8e-16 86.7 56 67.9
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 8.9e-16 86.3 56 73.2
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 8.9e-16 86.3 56 73.2
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 8.9e-16 86.3 56 71.4
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 8.9e-16 86.3 56 69.6
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 1.2e-15 85.9 53 75.5
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 1.2e-15 85.9 56 73.2
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 1.5e-15 85.5 56 73.2
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 1.5e-15 85.5 56 73.2
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 1.5e-15 85.5 56 67.9
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 1.5e-15 85.5 53 77.4
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 1.5e-15 85.5 56 73.2
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 2.0e-15 85.1 56 66.1
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 2.0e-15 85.1 55 70.9
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.6e-15 84.7 56 69.6
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 2.6e-15 84.7 56 69.6
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 2.6e-15 84.7 56 69.6
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 2.6e-15 84.7 56 73.2
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 3.4e-15 84.3 56 71.4
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 3.4e-15 84.3 56 69.6
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 3.4e-15 84.3 56 69.6
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 3.4e-15 84.3 56 67.9
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 5.8e-15 83.6 56 69.6
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 5.8e-15 83.6 56 67.9
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 7.5e-15 83.2 56 67.9
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 7.5e-15 83.2 56 71.4
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 7.5e-15 83.2 56 73.2
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 9.8e-15 82.8 56 64.3
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 9.8e-15 82.8 56 69.6
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 9.8e-15 82.8 56 69.6
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 9.8e-15 82.8 56 69.6
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 1.3e-14 82.4 53 69.8
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.3e-14 82.4 56 66.1
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 1.7e-14 82.0 53 67.9
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 1.7e-14 82.0 56 66.1
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 1.7e-14 82.0 56 69.6
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 1.7e-14 82.0 56 67.9
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 2.2e-14 81.6 53 69.8
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 2.2e-14 81.6 55 67.3
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 2.2e-14 81.6 55 67.3
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 2.2e-14 81.6 56 69.6
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 2.2e-14 81.6 53 67.9
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.2e-14 81.6 56 67.9
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 2.2e-14 81.6 56 64.3
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 2.9e-14 81.3 56 62.5
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 2.9e-14 81.3 56 67.9
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 3.7e-14 80.9 53 67.9
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 3.7e-14 80.9 53 67.9
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 3.7e-14 80.9 56 64.3
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 3.7e-14 80.9 56 67.9
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 3.7e-14 80.9 56 66.1
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 4.9e-14 80.5 53 67.9
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 4.9e-14 80.5 53 67.9
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 4.9e-14 80.5 53 67.9
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 6.4e-14 80.1 53 66.0
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 6.4e-14 80.1 53 66.0
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 6.4e-14 80.1 56 64.3
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 8.3e-14 79.7 56 67.9
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 8.3e-14 79.7 53 66.0
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 8.3e-14 79.7 53 66.0
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 1.1e-13 79.3 56 66.1
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 1.1e-13 79.3 59 62.7
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 1.1e-13 79.3 56 66.1
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 1.1e-13 79.3 56 67.9
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-13 79.3 56 67.9
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-13 79.3 56 67.9
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-13 79.3 56 67.9
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-13 79.3 56 67.9
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 1.1e-13 79.3 56 66.1
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 1.1e-13 79.3 56 66.1
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 1.1e-13 79.3 56 64.3
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 1.1e-13 79.3 56 67.9
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 1.4e-13 79.0 52 67.3
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 1.4e-13 79.0 52 67.3
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 1.4e-13 79.0 52 67.3
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 1.4e-13 79.0 52 67.3
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 1.4e-13 79.0 53 64.2
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 1.4e-13 79.0 53 64.2
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 1.9e-13 78.6 56 64.3
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 1.9e-13 78.6 57 66.7
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 1.9e-13 78.6 53 66.0
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 1.9e-13 78.6 56 64.3
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 1.9e-13 78.6 56 66.1
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.4e-13 78.2 55 67.3
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 3.2e-13 77.8 56 66.1
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 3.2e-13 77.8 56 62.5
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 3.2e-13 77.8 56 64.3
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 4.1e-13 77.4 56 62.5
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 4.1e-13 77.4 56 66.1
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 4.1e-13 77.4 56 66.1
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 7.1e-13 76.6 56 62.5
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 7.1e-13 76.6 56 62.5
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 7.1e-13 76.6 56 62.5
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 7.1e-13 76.6 56 62.5
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 7.1e-13 76.6 56 62.5
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 7.1e-13 76.6 56 64.3
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 1.2e-12 75.9 56 64.3
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.2e-12 75.9 56 62.5
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 1.2e-12 75.9 56 62.5
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 1.2e-12 75.9 56 60.7
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 1.6e-12 75.5 56 62.5
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 1.6e-12 75.5 56 62.5
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 2.1e-12 75.1 56 58.9
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 2.7e-12 74.7 56 62.5
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 2.7e-12 74.7 56 60.7
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 6.0e-12 73.6 56 60.7
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 7.8e-12 73.2 56 62.5
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 7.8e-12 73.2 56 58.9
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 7.8e-12 73.2 56 58.9
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 7.8e-12 73.2 56 58.9
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 7.8e-12 73.2 53 64.2
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.3e-11 72.4 52 65.4
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 5.1e-11 70.5 56 58.9
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 5.6e-10 67.0 56 55.4
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.6e-09 65.5 45 68.9
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 1.1e-08 62.8 55 49.1
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 2.0e-07 58.5 60 50.0
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 2.6e-07 58.2 45 60.0
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 4.4e-07 57.4 56 46.4
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 2.2e-06 55.1 53 47.2
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 2.9e-06 54.7 42 61.9
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 8.4e-06 53.1 53 45.3


User provided reference genes

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