Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu064130.1 Olea europaea HOM05D002974 ORTHO05D002992 1.0e-76 290.0 151 100.0
MSTRG.28034 Avicennia marina HOM05D002974 ORTHO05D002992 3.6e-29 132.1 152 55.3
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 7.9e-29 131.0 141 58.2
Oeu006786.1 Olea europaea HOM05D002974 ORTHO05D002992 6.9e-25 117.9 145 55.9
Oeu053079.1 Olea europaea HOM05D002974 ORTHO05D002992 9.1e-25 117.5 150 54.7
Dinv44699 Davidia involucrata HOM05D002974 ORTHO05D002992 2.2e-23 112.8 146 52.1
Migut.N01854 Erythranthe guttata HOM05D002974 ORTHO05D002992 2.2e-23 112.8 141 51.1
MSTRG.5073 Avicennia marina HOM05D002974 ORTHO05D002992 4.2e-22 108.6 164 51.2
Oeu011571.1 Olea europaea HOM05D002974 ORTHO05D002992 1.2e-21 107.1 139 54.0
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 3.9e-20 102.1 144 45.8
Solyc01g096510.2 Solanum lycopersicum HOM05D002974 ORTHO05D002992 1.5e-19 100.1 154 45.5
Sopen01g040240 Solanum pennellii HOM05D002974 ORTHO05D002992 3.3e-19 99.0 154 45.5
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 1.7e-18 96.7 137 43.8
Migut.B01240 Erythranthe guttata HOM05D002974 ORTHO05D002992 7.0e-17 91.3 151 45.0
TWI15G0153 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 7.0e-17 91.3 153 39.2
Sabra03G0145400 Salix brachista HOM05D002974 ORTHO05D002992 4.5e-16 88.6 148 44.6
CAN.G134.10 Capsicum annuum HOM05D002974 ORTHO05D002992 1.3e-15 87.0 153 41.2
Manes.11G007000 Manihot esculenta HOM05D002974 ORTHO05D002992 1.3e-15 87.0 139 40.3
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 6.5e-15 84.7 136 44.1
Rhsim07G0068200 Rhododendron simsii HOM05D002974 ORTHO05D002992 1.1e-14 84.0 144 43.8
SalBow5G5227 Salvia bowleyana HOM05D002974 ORTHO05D002992 1.1e-14 84.0 128 48.4
PGSC0003DMG400005401 Solanum tuberosum HOM05D002974 ORTHO05D002992 1.1e-14 84.0 161 42.2
Manes.04G157400 Manihot esculenta HOM05D002974 ORTHO05D002992 1.9e-14 83.2 139 38.8
SalBow6G5116 Salvia bowleyana HOM05D002974 ORTHO05D002992 1.9e-14 83.2 117 48.7
SGA_v2.0_scaffold43G16289 Striga asiatica HOM05D002974 ORTHO05D002992 2.5e-14 82.8 149 42.3
Dinv06180 Davidia involucrata HOM05D002974 ORTHO05D002992 3.2e-14 82.4 120 44.2
Nitab4.5_0003481g0110 Nicotiana tabacum HOM05D002974 ORTHO05D002992 4.2e-14 82.0 146 43.2
Duzib114G0524 Durio zibethinus HOM05D002974 ORTHO05D002992 7.2e-14 81.3 150 40.0
Thecc.10G149600 Theobroma cacao HOM05D002974 ORTHO05D002992 9.4e-14 80.9 147 39.5
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 1.6e-13 80.1 141 40.4
Nitab4.5_0005808g0010 Nicotiana tabacum HOM05D002974 ORTHO05D002992 2.7e-13 79.3 168 39.9
SGA_v2.0_scaffold232G43495 Striga asiatica HOM05D002974 ORTHO05D002992 2.7e-13 79.3 129 45.0
EL10Ac2g02772 Beta vulgaris HOM05D012416 ORTHO05D002992 4.7e-13 78.6 141 41.1
AUR62026884 Chenopodium quinoa HOM05D012416 ORTHO05D002992 4.7e-13 78.6 171 38.0
AUR62044059 Chenopodium quinoa HOM05D012416 ORTHO05D006373 4.7e-13 78.6 171 38.0
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 1.4e-12 77.0 134 40.3
CSS0001226 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 3.0e-12 75.9 132 40.2
FvH4_7g03520 Fragaria vesca HOM05D002974 ORTHO05D002992 3.0e-12 75.9 67 59.7
FAN06G3677 Fragaria x ananassa HOM05D002974 ORTHO05D002992 3.0e-12 75.9 67 59.7
CiPaw.14G008700 Carya illinoinensis HOM05D002974 ORTHO05D002992 4.0e-12 75.5 98 46.9
QL07p010402 Quercus lobata HOM05D002974 ORTHO05D002992 4.0e-12 75.5 132 38.6
Sc11g0006360 Simmondsia chinensis HOM05D002974 ORTHO05D002992 5.2e-12 75.1 113 43.4
AUR62032633 Chenopodium quinoa HOM05D012416 ORTHO05D002992 6.7e-12 74.7 154 38.3
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 8.8e-12 74.3 158 38.0
Duzib106G1811 Durio zibethinus HOM05D002974 ORTHO05D002992 8.8e-12 74.3 146 37.0
Prupe.2G041200 Prunus persica HOM05D002974 ORTHO05D002992 8.8e-12 74.3 68 60.3
COL.COLO4_20695 Corchorus olitorius HOM05D003550 ORTHO05D004336 1.2e-11 73.9 107 43.9
FAN10G2850 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.2e-11 73.9 68 60.3
VMungo1383G0235 Vigna mungo HOM05D002974 ORTHO05D002992 1.2e-11 73.9 141 39.0
CSS0032574 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 2.0e-11 73.2 130 40.0
Ciclev10002803m.g Citrus clementina HOM05D002974 ORTHO05D002992 2.0e-11 73.2 150 36.7
RcHm_v2.0_Chr1g0325821 Rosa chinensis HOM05D002974 ORTHO05D002992 2.0e-11 73.2 132 40.2
FAN03G0828 Fragaria x ananassa HOM05D002974 ORTHO05D002992 2.6e-11 72.8 68 58.8
TAR633G1036 Trochodendron aralioides HOM05D002974 ORTHO05D002992 2.6e-11 72.8 136 40.4
FAN01G3097 Fragaria x ananassa HOM05D002974 ORTHO05D002992 3.3e-11 72.4 67 58.2
Lalb_Chr24g0400351 Lupinus albus HOM05D002974 ORTHO05D002992 5.7e-11 71.6 164 34.8
Cfa010941 Carpinus fangiana HOM05D002974 ORTHO05D002992 9.7e-11 70.9 78 53.8
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 9.7e-11 70.9 152 36.2
QL04p017813 Quercus lobata HOM05D002974 ORTHO05D002992 9.7e-11 70.9 67 55.2
QL04p018674 Quercus lobata HOM05D002974 ORTHO05D002992 9.7e-11 70.9 67 55.2
CiPaw.10G040200 Carya illinoinensis HOM05D002974 ORTHO05D002992 1.3e-10 70.5 137 37.2
CiPaw.13G015100 Carya illinoinensis HOM05D002974 ORTHO05D002992 1.3e-10 70.5 76 51.3
Glyma.19G130400 Glycine max HOM05D002974 ORTHO05D002992 1.3e-10 70.5 158 35.4
Manes.09G004900 Manihot esculenta HOM05D002974 ORTHO05D002992 2.2e-10 69.7 149 34.2
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 2.8e-10 69.3 128 41.4
Oeu013084.1 Olea europaea HOM05D002974 ORTHO05D002992 2.8e-10 69.3 49 75.5
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 3.7e-10 68.9 137 38.7
Gohir.D04G016200 Gossypium hirsutum HOM05D002974 ORTHO05D002992 3.7e-10 68.9 118 38.1
Glyma.03G127800 Glycine max HOM05D002974 ORTHO05D002992 4.8e-10 68.6 157 35.7
Gorai.012G018900 Gossypium raimondii HOM05D002974 ORTHO05D002992 8.2e-10 67.8 118 38.1
ECA234G2872 Erigeron canadensis HOM05D002974 ORTHO05D002992 1.1e-09 67.4 128 40.6
Gorai.011G217100 Gossypium raimondii HOM05D002974 ORTHO05D002992 1.1e-09 67.4 147 33.3
Gohir.A05G399600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.4e-09 67.0 118 38.1
Gohir.A10G187100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.4e-09 67.0 149 32.2
Gohir.D10G194600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.8e-09 66.6 147 33.3
Sc10g0004500 Simmondsia chinensis HOM05D002974 ORTHO05D002992 1.8e-09 66.6 70 58.6
DCAR_025326 Daucus carota HOM05D002974 ORTHO05D002992 2.4e-09 66.2 61 57.4
arahy.Tifrunner.gnm1.ann1.C03B5F Arachis hypogaea HOM05D002974 ORTHO05D002992 3.1e-09 65.9 192 32.8
unitig_26.g9507 Utricularia gibba HOM05D002974 ORTHO05D002992 3.1e-09 65.9 146 34.2
Phvul.001G123400 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 4.1e-09 65.5 138 34.8
PGR031G0048 Punica granatum HOM05D002974 ORTHO05D002992 4.1e-09 65.5 63 57.1
QL04p017793 Quercus lobata HOM05D002974 ORTHO05D002992 4.1e-09 65.5 57 57.9
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 7.0e-09 64.7 144 34.7
CANSAT56G2792 Cannabis sativa HOM05D002974 ORTHO05D002992 9.1e-09 64.3 148 35.1
MD14G1088500 Malus domestica HOM05D002974 ORTHO05D002992 9.1e-09 64.3 163 34.4
MELO3C012484.2 Cucumis melo HOM05D002974 ORTHO05D002992 1.2e-08 63.9 59 59.3
Eucgr.A02242 Eucalyptus grandis HOM05D002974 ORTHO05D002992 1.2e-08 63.9 148 35.8
Atru.chr12.1277 Acer truncatum HOM05D002974 ORTHO05D002992 1.6e-08 63.5 128 43.0
Peaxi162Scf00082g00006 Petunia axillaris HOM05D002974 ORTHO05D002992 1.6e-08 63.5 58 60.3
Sed0000723 Sechium edule HOM05D002974 ORTHO05D002992 2.0e-08 63.2 58 62.1
CsaV3_5G036860 Cucumis sativus L. HOM05D002974 ORTHO05D002992 2.7e-08 62.8 80 52.5
AUR62031748 Chenopodium quinoa HOM05D012416 ORTHO05D006373 4.5e-08 62.0 111 39.6
Potri.006G038900 Populus trichocarpa HOM05D002974 ORTHO05D002992 5.9e-08 61.6 142 36.6
Thecc.05G134100 Theobroma cacao HOM05D002974 ORTHO05D002992 7.7e-08 61.2 142 35.2
TWI53G1119 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 7.7e-08 61.2 134 35.8
Prupe.7G038200 Prunus persica HOM05D002974 ORTHO05D002992 1.0e-07 60.8 134 35.8
Medtr7g089860 Medicago truncatula HOM05D002974 ORTHO05D002992 1.3e-07 60.5 123 35.0
Potri.016G036600 Populus trichocarpa HOM05D002974 ORTHO05D002992 1.3e-07 60.5 143 34.3
TPR.G8953 Trifolium pratense HOM05D002974 ORTHO05D002992 1.7e-07 60.1 147 35.4
Lj3g0008937 Lotus japonicus HOM05D002974 ORTHO05D002992 2.2e-07 59.7 58 56.9
PSO384G2085 Papaver somniferum HOM05D002974 ORTHO05D002992 2.2e-07 59.7 163 35.0
Sed0006618 Sechium edule HOM05D002974 ORTHO05D002992 2.2e-07 59.7 141 34.0
ClCG05G026910 Citrullus lanatus HOM05D002974 ORTHO05D002992 2.9e-07 59.3 121 40.5
Lalb_Chr22g0357431 Lupinus albus HOM05D002974 ORTHO05D002992 2.9e-07 59.3 163 35.6
Cpa.g.sc5.168 Carica papaya HOM05D002974 ORTHO05D002992 3.8e-07 58.9 163 31.3
MSTRG.26159 Avicennia marina HOM05D002974 ORTHO05D002992 5.0e-07 58.5 135 34.1
Eucgr.G03218 Eucalyptus grandis HOM05D002974 ORTHO05D002992 5.0e-07 58.5 144 36.8
PSO339G5722 Papaver somniferum HOM05D002974 ORTHO05D002992 5.0e-07 58.5 159 31.4
Sabra16G0038800 Salix brachista HOM05D002974 ORTHO05D002992 5.0e-07 58.5 145 34.5
Ah.10g030130 Amaranthus hybridus HOM05D002974 ORTHO05D002992 6.5e-07 58.2 56 53.6
Haze_20227 Corylus avellana HOM05D002974 ORTHO05D002992 8.5e-07 57.8 137 35.0
Glyma.04G134200 Glycine max HOM05D002974 ORTHO05D002992 8.5e-07 57.8 71 50.7
Duzib128G1163 Durio zibethinus HOM05D002974 ORTHO05D002992 1.1e-06 57.4 121 36.4
Medtr3g013980 Medicago truncatula HOM05D002974 ORTHO05D002992 1.1e-06 57.4 56 57.1
Atru.chr1.1439 Acer truncatum HOM05D002974 ORTHO05D002992 1.5e-06 57.0 151 35.1
CANSAT64G2862 Cannabis sativa HOM05D002974 ORTHO05D002992 1.5e-06 57.0 160 31.9
Psat3g078800 Pisum sativum HOM05D002974 ORTHO05D002992 1.5e-06 57.0 152 34.2
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 1.5e-06 57.0 51 56.9
THA.LOC109116532 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 1.5e-06 57.0 122 39.3
HPP92_028460 Vanilla planifolia HOM05D002974 ORTHO05D002992 1.5e-06 57.0 57 52.6
Lalb_Chr19g0133001 Lupinus albus HOM05D002974 ORTHO05D002992 1.9e-06 56.6 49 61.2
Sed0012008 Sechium edule HOM05D002974 ORTHO05D002992 1.9e-06 56.6 45 57.8
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 2.5e-06 56.2 148 34.5
Migut.B00886 Erythranthe guttata HOM05D002974 ORTHO05D002992 2.5e-06 56.2 111 38.7
Os01g0808900 Oryza sativa ssp. japonica HOM05D002974 ORTHO05D002992 2.5e-06 56.2 43 62.8
AUR62018028 Chenopodium quinoa HOM05D052726 ORTHO05D002992 3.2e-06 55.8 55 47.3
AUR62043733 Chenopodium quinoa HOM05D052726 ORTHO05D002992 3.2e-06 55.8 55 47.3
Psat5g220360 Pisum sativum HOM05D002974 ORTHO05D002992 3.2e-06 55.8 130 36.9
CDE08G1203 Ceratophyllum demersum HOM05D002974 ORTHO05D002992 4.2e-06 55.5 65 50.8
Phvul.011G203450 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 4.2e-06 55.5 49 59.2
TPR.G22516 Trifolium pratense HOM05D002974 ORTHO05D002992 4.2e-06 55.5 112 37.5
VMungo1080G0254 Vigna mungo HOM05D002974 ORTHO05D002992 4.2e-06 55.5 108 41.7
Phvul.005G024800 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 5.5e-06 55.1 62 53.2
ClCG04G004500 Citrullus lanatus HOM05D002974 ORTHO05D002992 7.2e-06 54.7 43 62.8
Lalb_Chr21g0315251 Lupinus albus HOM05D002974 ORTHO05D002992 7.2e-06 54.7 54 57.4
PGR031G3974 Punica granatum HOM05D002974 ORTHO05D002992 9.4e-06 54.3 148 35.1


User provided reference genes

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