Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063995.1 Olea europaea HOM05D005754 ORTHO05D006843 5.3e-157 557.8 304 100.0
SalBow5G0150 Salvia bowleyana HOM05D005754 ORTHO05D006843 2.2e-131 472.6 304 81.9
vmacro03555 Vaccinium macrocarpon HOM05D005754 ORTHO05D006843 1.1e-130 470.3 304 81.2
Nitab4.5_0006933g0010 Nicotiana tabacum HOM05D005754 ORTHO05D006843 3.2e-130 468.8 304 80.6
MSTRG.26599 Avicennia marina HOM05D005754 ORTHO05D006843 1.6e-129 466.5 304 81.2
Nitab4.5_0006976g0040 Nicotiana tabacum HOM05D005754 ORTHO05D006843 3.6e-129 465.3 304 80.3
Rhsim08G0028000 Rhododendron simsii HOM05D005754 ORTHO05D006843 6.7e-128 461.1 304 80.3
Cc09_g05360 Coffea canephora HOM05D005754 ORTHO05D006843 1.1e-127 460.3 296 81.8
Sopen02g026230 Solanum pennellii HOM05D005754 ORTHO05D006843 2.6e-127 459.1 304 79.3
PGSC0003DMG400017743 Solanum tuberosum HOM05D005754 ORTHO05D006843 2.6e-127 459.1 304 79.3
CAN.G809.72 Capsicum annuum HOM05D005754 ORTHO05D006843 1.3e-126 456.8 304 78.9
Solyc02g081610.3 Solanum lycopersicum HOM05D005754 ORTHO05D006843 2.8e-126 455.7 304 78.6
Rhsim02G0117500 Rhododendron simsii HOM05D005754 ORTHO05D006843 3.7e-126 455.3 304 79.3
PGSC0003DMG400024410 Solanum tuberosum HOM05D005754 ORTHO05D006843 3.7e-126 455.3 304 78.6
Duzib151G1210 Durio zibethinus HOM05D005754 ORTHO05D006843 6.3e-126 454.5 304 78.3
COL.COLO4_15977 Corchorus olitorius HOM05D005754 ORTHO05D006843 1.6e-124 449.9 304 78.3
CSS0030019 Camellia sinensis var. sinensis HOM05D005754 ORTHO05D006843 2.2e-123 446.0 304 78.3
Thecc.04G266000 Theobroma cacao HOM05D005754 ORTHO05D006843 3.8e-123 445.3 304 77.0
CiPaw.09G178700 Carya illinoinensis HOM05D005754 ORTHO05D006843 1.2e-121 440.3 304 75.3
CiPaw.09G178800 Carya illinoinensis HOM05D005754 ORTHO05D006843 1.6e-121 439.9 304 75.7
DCAR_002228 Daucus carota HOM05D005754 ORTHO05D006843 6.1e-121 438.0 301 79.1
QL03p068630 Quercus lobata HOM05D005754 ORTHO05D006843 1.4e-120 436.8 303 74.9
QL05p030092 Quercus lobata HOM05D005754 ORTHO05D006843 1.4e-120 436.8 303 74.9
Lj2P343T23 Lonicera japonica HOM05D005754 ORTHO05D006843 1.2e-119 433.7 281 81.9
Cfa001129 Carpinus fangiana HOM05D005754 ORTHO05D006843 2.6e-119 432.6 304 76.3
Ciclev10016094m.g Citrus clementina HOM05D005754 ORTHO05D006843 3.4e-119 432.2 296 77.0
Haze_05263 Corylus avellana HOM05D005754 ORTHO05D006843 7.5e-119 431.0 303 75.9
Dinv31187 Davidia involucrata HOM05D005754 ORTHO05D006843 2.2e-118 429.5 304 77.3
Glyma.12G019600 Glycine max HOM05D005754 ORTHO05D006843 2.2e-118 429.5 304 75.7
Ca_04011_v3 Cicer arietinum L. HOM05D005754 ORTHO05D006843 2.8e-118 429.1 300 75.3
Lalb_Chr17g0344101 Lupinus albus HOM05D005754 ORTHO05D006843 3.7e-118 428.7 301 75.1
Cpa.g.sc17.6 Carica papaya HOM05D005754 ORTHO05D006843 4.8e-118 428.3 304 74.7
TPR.G24478 Trifolium pratense HOM05D005754 ORTHO05D006843 6.3e-118 427.9 299 76.3
Migut.H00867 Erythranthe guttata HOM05D005754 ORTHO05D006843 8.3e-118 427.6 290 79.3
VMungo1127G0046 Vigna mungo HOM05D005754 ORTHO05D006843 1.4e-117 426.8 304 74.3
MD05G1011700 Malus domestica HOM05D005754 ORTHO05D006843 4.1e-117 425.2 304 75.0
HanXRQChr04g0115041 Helianthus annuus HOM05D005754 ORTHO05D006843 5.3e-117 424.9 281 79.4
PSO801G0209 Papaver somniferum HOM05D005754 ORTHO05D006843 5.3e-117 424.9 295 75.6
Nn2g13637 Nelumbo nucifera HOM05D005754 ORTHO05D006843 1.6e-116 423.3 304 73.7
Nn2g13638 Nelumbo nucifera HOM05D005754 ORTHO05D006843 1.6e-116 423.3 304 73.7
Prupe.8G016600 Prunus persica HOM05D005754 ORTHO05D006843 2.0e-116 422.9 295 78.3
Gohir.D09G228000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 3.5e-116 422.2 304 73.7
Gorai.006G250700 Gossypium raimondii HOM05D005754 ORTHO05D006843 4.5e-116 421.8 304 73.4
Medtr3g077990 Medicago truncatula HOM05D005754 ORTHO05D006843 4.5e-116 421.8 296 75.0
TAR636G0743 Trochodendron aralioides HOM05D005754 ORTHO05D006843 7.7e-116 421.0 304 73.7
TAR636G1551 Trochodendron aralioides HOM05D005754 ORTHO05D006843 7.7e-116 421.0 304 73.7
TPR.G21775 Trifolium pratense HOM05D005754 ORTHO05D006843 1.0e-115 420.6 299 74.6
Potri.001G160600 Populus trichocarpa HOM05D005754 ORTHO05D006843 1.3e-115 420.2 295 73.9
Sabra03G0045000 Salix brachista HOM05D005754 ORTHO05D006843 1.3e-115 420.2 292 75.3
Manes.16G050000 Manihot esculenta HOM05D005754 ORTHO05D006843 1.7e-115 419.9 296 74.3
RcHm_v2.0_Chr6g0277521 Rosa chinensis HOM05D005754 ORTHO05D006843 1.7e-115 419.9 296 77.4
Gohir.A09G227000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 2.9e-115 419.1 304 73.4
Potri.003G074300 Populus trichocarpa HOM05D005754 ORTHO05D006843 2.9e-115 419.1 292 74.7
Atru.chr10.361 Acer truncatum HOM05D005754 ORTHO05D006843 1.5e-114 416.8 290 75.2
PSO339G5576 Papaver somniferum HOM05D005754 ORTHO05D006843 3.2e-114 415.6 294 74.5
unitig_747.g21312 Utricularia gibba HOM05D005754 ORTHO05D006843 4.2e-114 415.2 304 71.4
FvH4_2g14913 Fragaria vesca HOM05D005754 ORTHO05D006843 5.5e-114 414.8 296 75.3
FvH4_1g22930 Fragaria vesca HOM05D005754 ORTHO05D006843 7.2e-114 414.5 293 77.1
SGA_v2.0_scaffold184G40027 Striga asiatica HOM05D005754 ORTHO05D006843 1.2e-113 413.7 305 74.4
THA.LOC104798565 Tarenaya hassleriana HOM05D005754 ORTHO05D006843 2.1e-113 412.9 305 72.1
TWI74G1242 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 2.1e-113 412.9 304 72.7
FAN24G3472 Fragaria x ananassa HOM05D005754 ORTHO05D006843 3.6e-113 412.1 296 76.7
Aqoxy2G00957 Aquilegia oxysepala HOM05D005754 ORTHO05D006843 3.0e-112 409.1 295 73.9
arahy.Tifrunner.gnm1.ann1.RJAX1V Arachis hypogaea HOM05D005754 ORTHO05D006843 4.0e-112 408.7 305 71.5
TWI53G2110 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 6.8e-112 407.9 296 74.0
TAR633G0926 Trochodendron aralioides HOM05D005754 ORTHO05D006843 6.8e-112 407.9 304 72.4
Lsat_1_v5_gn_5_184141 Lactuca sativa HOM05D005754 ORTHO05D006843 8.8e-112 407.5 298 73.8
ClCG01G009960 Citrullus lanatus HOM05D005754 ORTHO05D006843 2.0e-111 406.4 304 71.4
MELO3C021702.2 Cucumis melo HOM05D005754 ORTHO05D006843 9.8e-111 404.1 304 70.7
Thhalv10016993m.g Eutrema salsugineum HOM05D005754 ORTHO05D006843 9.8e-111 404.1 305 72.8
Lj3g0027197 Lotus japonicus HOM05D005754 ORTHO05D006843 1.3e-110 403.7 299 73.9
arahy.Tifrunner.gnm1.ann1.9I9HCV Arachis hypogaea HOM05D005754 ORTHO05D006843 1.7e-110 403.3 305 70.8
CARHR129140 Cardamine hirsuta HOM05D005754 ORTHO05D006843 1.7e-110 403.3 305 70.8
Prupe.7G012900 Prunus persica HOM05D005754 ORTHO05D006843 6.3e-110 401.4 304 69.7
Sed0006244 Sechium edule HOM05D005754 ORTHO05D006843 1.4e-109 400.2 304 71.1
AT2G34980 Arabidopsis thaliana HOM05D005754 ORTHO05D006843 1.6e-108 396.7 305 69.2
MD12G1011000 Malus domestica HOM05D005754 ORTHO05D006843 1.6e-108 396.7 304 69.1
Aa31LG9G16220 Aethionema arabicum HOM05D005754 ORTHO05D006843 2.7e-108 396.0 305 70.2
Sc15g0000060 Simmondsia chinensis HOM05D005754 ORTHO05D006843 2.7e-108 396.0 304 68.4
Os02g0622200 Oryza sativa ssp. japonica HOM05D005754 ORTHO05D006843 5.9e-108 394.8 296 70.9
RcHm_v2.0_Chr3g0496061 Rosa chinensis HOM05D005754 ORTHO05D006843 7.7e-108 394.4 304 69.4
C04p13810 Brassica napus HOM05D005754 ORTHO05D006843 1.0e-107 394.0 293 73.0
BolC4t22971H Brassica oleracea HOM05D005754 ORTHO05D006843 1.0e-107 394.0 293 73.0
BcaB02g09492 Brassica carinata HOM05D005754 ORTHO05D006843 1.3e-107 393.7 292 72.9
BraA05t20016Z Brassica rapa HOM05D005754 ORTHO05D006843 1.3e-107 393.7 293 71.0
FAN28G1898 Fragaria x ananassa HOM05D005754 ORTHO05D006843 2.9e-107 392.5 304 69.1
FAN19G0110 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.5e-106 390.2 281 76.5
PGR142G3917 Punica granatum HOM05D005754 ORTHO05D006843 4.2e-106 388.7 296 69.6
Zm00001eb185080 Zea mays HOM05D005754 ORTHO05D006843 5.5e-106 388.3 289 70.9
A05p10720 Brassica napus HOM05D005754 ORTHO05D006843 7.2e-106 387.9 293 71.7
Ah.01g016960 Amaranthus hybridus HOM05D005754 ORTHO05D006843 2.8e-105 386.0 296 69.3
AL4G30990 Arabidopsis lyrata HOM05D005754 ORTHO05D006843 2.8e-105 386.0 305 70.8
Carub.0004s1667 Capsella rubella HOM05D005754 ORTHO05D006843 8.0e-105 384.4 305 70.2
ATR0618G331 Amborella trichopoda HOM05D005754 ORTHO05D006843 1.4e-104 383.6 295 68.5
BcaB02g09491 Brassica carinata HOM05D005754 ORTHO05D006843 3.0e-104 382.5 306 67.6
EL10Ac9g21106 Beta vulgaris HOM05D005754 ORTHO05D006843 9.8e-103 377.5 296 67.6
BcaC02g07743 Brassica carinata HOM05D004145 ORTHO05D006843 1.3e-102 377.1 304 67.4
AUR62038334 Chenopodium quinoa HOM05D005754 ORTHO05D006843 8.3e-102 374.4 295 67.1
FAN26G0490 Fragaria x ananassa HOM05D005754 ORTHO05D006843 4.1e-101 372.1 281 74.0
Lsat_1_v5_gn_2_60361 Lactuca sativa HOM05D005754 ORTHO05D006843 6.6e-99 364.8 273 72.9
HPP92_025694 Vanilla planifolia HOM05D005754 ORTHO05D006843 1.5e-95 353.6 290 63.4
SEGI_24883 Sequoiadendron giganteum HOM05D005754 ORTHO05D006843 3.4e-95 352.4 302 60.3
AUR62023912 Chenopodium quinoa HOM05D005754 ORTHO05D006843 9.8e-95 350.9 281 66.5
Eucgr.G02638 Eucalyptus grandis HOM05D005754 ORTHO05D006843 1.1e-93 347.4 296 64.2
SHI51133 Sapria himalayana HOM05D005754 ORTHO05D006843 1.6e-92 343.6 305 60.3
Psat4g130160 Pisum sativum HOM05D005754 ORTHO05D006843 4.7e-81 305.4 231 71.9
SHI47983 Sapria himalayana HOM05D005754 ORTHO05D006843 1.2e-79 300.8 285 59.6
QL06p000087 Quercus lobata HOM05D005754 ORTHO05D006843 3.6e-73 279.3 295 54.6
Phvul.011G021750 Phaseolus vulgaris HOM05D005754 ORTHO05D006843 4.7e-73 278.9 195 76.4
Pp3c1_31960 Physcomitrium patens HOM05D005754 ORTHO05D006843 8.1e-73 278.1 309 50.8
FAN27G3249 Fragaria x ananassa HOM05D005754 ORTHO05D006843 6.8e-72 275.0 198 75.8
AUR62040653 Chenopodium quinoa HOM05D002008 ORTHO05D006843 2.0e-63 246.9 195 68.7
SMO174G0201 Selaginella moellendorffii HOM05D005754 ORTHO05D006843 2.6e-63 246.5 292 51.7
Atru.chr10.357 Acer truncatum HOM05D005754 ORTHO05D006843 7.6e-63 245.0 163 76.1
AagrBONN_evm.TU.Sc2ySwM_368.2727 Anthoceros agrestis HOM05D005754 ORTHO05D006843 1.9e-61 240.4 295 48.8
GSVIVG01012143001 Vitis vinifera HOM05D005754 ORTHO05D006843 8.1e-57 224.9 159 76.1
SEGI_06024 Sequoiadendron giganteum HOM05D005754 ORTHO05D006843 1.1e-56 224.6 194 58.8
Mapoly0096s0067 Marchantia polymorpha HOM05D005754 ORTHO05D006843 1.3e-54 217.6 354 41.8
ECA238G2846 Erigeron canadensis HOM05D005754 ORTHO05D006843 5.4e-53 212.2 142 76.1
Phvul.011G022000 Phaseolus vulgaris HOM05D005754 ORTHO05D006843 3.3e-50 203.0 139 75.5
Psat4g130000 Pisum sativum HOM05D005754 ORTHO05D006843 2.8e-49 199.9 239 53.6
ClCG01G008540 Citrullus lanatus HOM05D005754 ORTHO05D006843 8.1e-49 198.4 292 45.9
Peaxi162Scf00048g00146 Petunia axillaris HOM05D005754 ORTHO05D006843 3.8e-46 189.5 211 55.0
Psat7g123440 Pisum sativum HOM05D005754 ORTHO05D006843 1.6e-36 157.5 186 52.2
TPR.G29739 Trifolium pratense HOM05D005754 ORTHO05D006843 3.5e-36 156.4 115 74.8
Nitab4.5_0011913g0010 Nicotiana tabacum HOM05D005754 ORTHO05D006843 1.8e-35 154.1 99 79.8
CSS0033773 Camellia sinensis var. sinensis HOM05D005754 ORTHO05D006843 4.8e-33 146.0 169 52.7
CBR_g21245 Chara braunii HOM05D005754 ORTHO05D006843 3.1e-32 143.3 182 45.1
Sp2g07050 Schrenkiella parvula HOM05D005754 ORTHO05D006843 6.9e-32 142.1 111 67.6
FAN15G0194 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.4e-27 127.9 97 73.2
Cre02.g109850 Chlamydomonas reinhardtii HOM05D005754 ORTHO05D006843 2.0e-18 97.4 284 30.3
CARHR278340 Cardamine hirsuta HOM05D005754 ORTHO05D006843 2.6e-18 97.1 86 59.3
CsaV3_1G018460 Cucumis sativus L. HOM05D001859 ORTHO05D001836 4.5e-15 86.3 54 72.2
Medtr3g464840 Medicago truncatula HOM05D000092 ORTHO05D005910 7.7e-15 85.5 74 68.9
Cfa024382 Carpinus fangiana HOM05D005754 ORTHO05D006843 1.7e-14 84.3 172 34.9
Hund00745 Selenicereus undatus HOM05D005754 ORTHO05D006843 1.7e-14 84.3 46 82.6
BcaC02g11579 Brassica carinata HOM05D005754 ORTHO05D006843 2.9e-14 83.6 60 66.7
MCO15G034 Micromonas commoda HOM05D005754 ORTHO05D006843 7.2e-13 79.0 303 27.4
Psat4g159400 Pisum sativum HOM05D003463 ORTHO05D004846 2.3e-11 73.9 150 36.0
BcaB06g28814 Brassica carinata HOM05D005754 ORTHO05D006843 1.3e-06 58.2 57 56.1


User provided reference genes

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