Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063955.1 Olea europaea HOM05D006417 ORTHO05D008113 2.1e-23 111.7 64 100.0
Cc04_g03270 Coffea canephora HOM05D006417 ORTHO05D008113 1.3e-20 102.4 63 92.1
HanXRQChr12g0376701 Helianthus annuus HOM05D006417 ORTHO05D008113 4.9e-20 100.5 64 92.2
Peaxi162Scf00034g00611 Petunia axillaris HOM05D006417 ORTHO05D008113 4.9e-20 100.5 64 87.5
CiPaw.02G150500 Carya illinoinensis HOM05D006417 ORTHO05D008113 8.3e-20 99.8 64 90.6
PGSC0003DMG400007579 Solanum tuberosum HOM05D006417 ORTHO05D008113 8.3e-20 99.8 64 87.5
HanXRQChr04g0096081 Helianthus annuus HOM05D006417 ORTHO05D008113 1.1e-19 99.4 64 90.6
Haze_16401 Corylus avellana HOM05D006417 ORTHO05D008113 1.8e-19 98.6 64 90.6
Lsat_1_v5_gn_5_130340 Lactuca sativa HOM05D006417 ORTHO05D008113 2.4e-19 98.2 64 89.1
Solyc12g043160.3 Solanum lycopersicum HOM05D006417 ORTHO05D008113 3.2e-19 97.8 64 85.9
Dinv38039 Davidia involucrata HOM05D006417 ORTHO05D008113 5.4e-19 97.1 64 87.5
Lj5A59T64 Lonicera japonica HOM05D006417 ORTHO05D008113 9.2e-19 96.3 65 89.2
CiPaw.01G238100 Carya illinoinensis HOM05D006417 ORTHO05D008113 1.2e-18 95.9 64 87.5
ATR0724G030 Amborella trichopoda HOM05D006417 ORTHO05D008113 1.6e-18 95.5 65 89.2
Zm00001eb225700 Zea mays HOM05D006417 ORTHO05D008113 1.6e-18 95.5 62 87.1
FAN14G4157 Fragaria x ananassa HOM05D006417 ORTHO05D008113 2.0e-18 95.1 65 87.7
BcaC05g25455 Brassica carinata HOM05D006417 ORTHO05D008113 5.9e-18 93.6 65 87.7
BcaC05g25459 Brassica carinata HOM05D006417 ORTHO05D008113 5.9e-18 93.6 65 87.7
Ciclev10026914m.g Citrus clementina HOM05D006417 ORTHO05D008113 5.9e-18 93.6 65 87.7
DCAR_023056 Daucus carota HOM05D006417 ORTHO05D008113 5.9e-18 93.6 62 91.9
FAN02G0035 Fragaria x ananassa HOM05D006417 ORTHO05D008113 5.9e-18 93.6 65 86.2
RcHm_v2.0_Chr2g0138111 Rosa chinensis HOM05D006417 ORTHO05D008113 5.9e-18 93.6 65 86.2
TAR626G0232 Trochodendron aralioides HOM05D006417 ORTHO05D008113 1.0e-17 92.8 65 87.7
BcaB03g13069 Brassica carinata HOM05D006417 ORTHO05D008113 1.3e-17 92.4 65 86.2
FAN05G1876 Fragaria x ananassa HOM05D006417 ORTHO05D008113 1.3e-17 92.4 65 84.6
AL1G27360 Arabidopsis lyrata HOM05D006417 ORTHO05D008113 1.7e-17 92.0 65 86.2
AT1G15270 Arabidopsis thaliana HOM05D006417 ORTHO05D008113 1.7e-17 92.0 65 86.2
Carub.0001s1503 Capsella rubella HOM05D006417 ORTHO05D008113 1.7e-17 92.0 65 86.2
unitig_27.g25076 Utricularia gibba HOM05D006417 ORTHO05D008113 1.7e-17 92.0 65 86.2
BcaC07g38776 Brassica carinata HOM05D006417 ORTHO05D008113 2.3e-17 91.7 65 84.6
BcaC07g41515 Brassica carinata HOM05D006417 ORTHO05D008113 2.3e-17 91.7 65 84.6
A08p31670 Brassica napus HOM05D006417 ORTHO05D008113 2.3e-17 91.7 65 84.6
A09p61510 Brassica napus HOM05D006417 ORTHO05D008113 2.3e-17 91.7 65 84.6
CARHR015790 Cardamine hirsuta HOM05D006417 ORTHO05D008113 2.3e-17 91.7 65 84.6
COL.COLO4_30395 Corchorus olitorius HOM05D006417 ORTHO05D008113 2.3e-17 91.7 65 84.6
Sp1g13580 Schrenkiella parvula HOM05D006417 ORTHO05D008113 2.3e-17 91.7 65 84.6
RcHm_v2.0_Chr2g0106421 Rosa chinensis HOM05D006417 ORTHO05D008113 3.0e-17 91.3 65 86.2
SalBow2G2995 Salvia bowleyana HOM05D006417 ORTHO05D008113 3.0e-17 91.3 65 86.2
HPP92_003724 Vanilla planifolia HOM05D002497 ORTHO05D002697 3.0e-17 91.3 64 84.4
Hma1.2p1_2039F.1_g312170 Hydrangea macrophylla HOM05D006417 ORTHO05D008113 3.9e-17 90.9 63 87.3
Prupe.3G069900 Prunus persica HOM05D006417 ORTHO05D008113 3.9e-17 90.9 65 84.6
Eucgr.J02983 Eucalyptus grandis HOM05D006417 ORTHO05D008113 5.0e-17 90.5 60 88.3
Gohir.A09G082600 Gossypium hirsutum HOM05D006417 ORTHO05D008113 5.0e-17 90.5 65 84.6
MD17G1194100 Malus domestica HOM05D006417 ORTHO05D008113 5.0e-17 90.5 65 84.6
Thecc.06G089800 Theobroma cacao HOM05D006417 ORTHO05D008113 5.0e-17 90.5 65 84.6
FAN09G4522 Fragaria x ananassa HOM05D006417 ORTHO05D008113 6.6e-17 90.1 65 83.1
Lj3g0004039 Lotus japonicus HOM05D006417 ORTHO05D008113 6.6e-17 90.1 65 84.6
Lalb_Chr01g0012721 Lupinus albus HOM05D006417 ORTHO05D008113 6.6e-17 90.1 65 84.6
Hund06616 Selenicereus undatus HOM05D006417 ORTHO05D008113 6.6e-17 90.1 65 84.6
Aa31LG4G200 Aethionema arabicum HOM05D006417 ORTHO05D008113 8.6e-17 89.7 65 83.1
Aqoxy7G01686 Aquilegia oxysepala HOM05D006417 ORTHO05D008113 8.6e-17 89.7 65 83.1
CANSAT56G0242 Cannabis sativa HOM05D006417 ORTHO05D008113 8.6e-17 89.7 65 84.6
Sed0004760 Sechium edule HOM05D006417 ORTHO05D008113 8.6e-17 89.7 65 84.6
Gohir.D09G082500 Gossypium hirsutum HOM05D006417 ORTHO05D008113 1.1e-16 89.4 65 83.1
MBI06_g06678_MAGBIO Magnolia biondii HOM05D006417 ORTHO05D008113 1.1e-16 89.4 65 83.1
Migut.D01026 Erythranthe guttata HOM05D006417 ORTHO05D008113 1.5e-16 89.0 65 86.2
Glyma.08G206000 Glycine max HOM05D006417 ORTHO05D008113 1.5e-16 89.0 65 83.1
Aqoxy7G03790 Aquilegia oxysepala HOM05D006417 ORTHO05D008113 1.9e-16 88.6 65 83.1
ClCG05G003220 Citrullus lanatus HOM05D006417 ORTHO05D008113 1.9e-16 88.6 65 83.1
CsaV3_3G010850 Cucumis sativus L. HOM05D006417 ORTHO05D008113 1.9e-16 88.6 65 83.1
Glyma.07G005600 Glycine max HOM05D006417 ORTHO05D008113 1.9e-16 88.6 65 83.1
C05p50430 Brassica napus HOM05D006417 ORTHO05D008113 2.5e-16 88.2 65 81.5
ClCG02G009660 Citrullus lanatus HOM05D006417 ORTHO05D008113 2.5e-16 88.2 65 83.1
CAN.G144.3 Capsicum annuum HOM05D006417 ORTHO05D008113 3.3e-16 87.8 59 84.7
Medtr4g012800 Medicago truncatula HOM05D006417 ORTHO05D008113 3.3e-16 87.8 65 81.5
Psat7g250440 Pisum sativum HOM05D006417 ORTHO05D008113 3.3e-16 87.8 65 81.5
Migut.I00879 Erythranthe guttata HOM05D006417 ORTHO05D008113 4.3e-16 87.4 61 86.9
Phvul.010G150000 Phaseolus vulgaris HOM05D006417 ORTHO05D008113 5.6e-16 87.0 65 80.0
Sed0026778 Sechium edule HOM05D006417 ORTHO05D008113 5.6e-16 87.0 65 81.5
Aa31LG8G3190 Aethionema arabicum HOM05D006417 ORTHO05D008113 7.3e-16 86.7 65 80.0
Nn2g11755 Nelumbo nucifera HOM05D006417 ORTHO05D008113 7.3e-16 86.7 66 84.8
Sc12g0009320 Simmondsia chinensis HOM05D006417 ORTHO05D008113 7.3e-16 86.7 65 83.1
BolC5t30076H Brassica oleracea HOM05D006417 ORTHO05D008113 9.5e-16 86.3 62 85.5
Thhalv10022282m.g Eutrema salsugineum HOM05D006417 ORTHO05D008113 1.2e-15 85.9 65 80.0
Glyma.20G047300 Glycine max HOM05D006417 ORTHO05D008113 1.2e-15 85.9 65 81.5
Atru.chr1.3302 Acer truncatum HOM05D006417 ORTHO05D008113 1.6e-15 85.5 65 80.0
FAN26G3442 Fragaria x ananassa HOM05D006417 ORTHO05D008113 1.6e-15 85.5 65 84.6
Manes.04G124600 Manihot esculenta HOM05D006417 ORTHO05D008113 1.6e-15 85.5 74 77.0
CARHR091200 Cardamine hirsuta HOM05D006417 ORTHO05D008113 2.1e-15 85.1 65 80.0
AT3G16040 Arabidopsis thaliana HOM05D006417 ORTHO05D008113 2.8e-15 84.7 65 78.5
EL10Ac9g22008 Beta vulgaris HOM05D006417 ORTHO05D008113 2.8e-15 84.7 65 78.5
AL3G28690 Arabidopsis lyrata HOM05D006417 ORTHO05D008113 3.6e-15 84.3 65 78.5
AL810U10020 Arabidopsis lyrata HOM05D006417 ORTHO05D008113 3.6e-15 84.3 65 78.5
A06p11260 Brassica napus HOM05D006417 ORTHO05D008113 3.6e-15 84.3 62 82.3
C08p45090 Brassica napus HOM05D006417 ORTHO05D008113 3.6e-15 84.3 62 82.3
BolC8t52055H Brassica oleracea HOM05D006417 ORTHO05D008113 3.6e-15 84.3 62 82.3
BraA06t24306Z Brassica rapa HOM05D006417 ORTHO05D008113 3.6e-15 84.3 62 82.3
BraA09t41524Z Brassica rapa HOM05D006417 ORTHO05D008113 3.6e-15 84.3 62 82.3
Gorai.006G098200 Gossypium raimondii HOM05D006417 ORTHO05D008113 4.7e-15 84.0 75 73.3
ECA247G1523 Erigeron canadensis HOM05D001142 ORTHO05D004628 6.2e-15 83.6 54 88.9
SalBow2G0478 Salvia bowleyana HOM05D008308 ORTHO05D008113 6.2e-15 83.6 58 86.2
C08p17070 Brassica napus HOM05D006417 ORTHO05D008113 8.0e-15 83.2 60 81.7
BolC8t49333H Brassica oleracea HOM05D006417 ORTHO05D008113 8.0e-15 83.2 60 81.7
Potri.001G181800 Populus trichocarpa HOM05D006417 ORTHO05D008113 8.0e-15 83.2 65 78.5
Carub.0003s1577 Capsella rubella HOM05D006417 ORTHO05D008113 1.0e-14 82.8 65 76.9
Sp3g14390 Schrenkiella parvula HOM05D006417 ORTHO05D008113 1.0e-14 82.8 65 76.9
CSS0028003 Camellia sinensis var. sinensis HOM05D006417 ORTHO05D008113 1.4e-14 82.4 59 84.7
Cpa.g.sc41.8 Carica papaya HOM05D006417 ORTHO05D008113 2.3e-14 81.6 71 74.6
GSVIVG01017091001 Vitis vinifera HOM05D006417 ORTHO05D008113 2.3e-14 81.6 65 80.0
Lj3g0012949 Lotus japonicus HOM05D006417 ORTHO05D008113 4.0e-14 80.9 66 80.3
Pp3c23_11500 Physcomitrium patens HOM05D006417 ORTHO05D008113 5.2e-14 80.5 64 78.1
AagrBONN_evm.TU.Sc2ySwM_117.2290 Anthoceros agrestis HOM05D006417 ORTHO05D008113 6.8e-14 80.1 65 76.9
A05p33430 Brassica napus HOM05D006417 ORTHO05D008113 1.2e-13 79.3 63 76.2
SGA_v2.0_scaffold37G14829 Striga asiatica HOM05D006417 ORTHO05D008113 1.5e-13 79.0 61 80.3
Thhalv10009202m.g Eutrema salsugineum HOM05D006417 ORTHO05D008113 2.0e-13 78.6 93 61.3
BcaC05g28917 Brassica carinata HOM05D006417 ORTHO05D008113 2.6e-13 78.2 74 70.3
Pp3c24_10010 Physcomitrium patens HOM05D006417 ORTHO05D008113 7.5e-13 76.6 64 75.0
FAN19G1924 Fragaria x ananassa HOM05D006417 ORTHO05D008113 1.3e-12 75.9 54 85.2
FvH4_1g16510 Fragaria vesca HOM05D006417 ORTHO05D008113 1.7e-12 75.5 54 85.2
arahy.Tifrunner.gnm1.ann1.6441EL Arachis hypogaea HOM05D006417 ORTHO05D008113 2.2e-12 75.1 90 60.0
DCAR_007563 Daucus carota HOM05D006417 ORTHO05D008113 2.2e-12 75.1 65 75.4
DCAR_026325 Daucus carota HOM05D006417 ORTHO05D008113 2.2e-12 75.1 65 75.4
Lsat_1_v5_gn_1_35180 Lactuca sativa HOM05D006417 ORTHO05D008113 2.2e-12 75.1 53 81.1
Mapoly0091s0070 Marchantia polymorpha HOM05D006417 ORTHO05D008113 4.9e-12 73.9 62 74.2
BcaNung06587 Brassica carinata HOM05D006417 ORTHO05D008113 1.1e-11 72.8 60 75.0
Nitab4.5_0004241g0020 Nicotiana tabacum HOM05D006417 ORTHO05D008113 2.4e-11 71.6 59 71.2
DCAR_002649 Daucus carota HOM05D006417 ORTHO05D008113 9.2e-11 69.7 60 75.0
Nitab4.5_0002859g0060 Nicotiana tabacum HOM05D006417 ORTHO05D008113 9.2e-11 69.7 64 65.6
Glyma.14G136351 Glycine max HOM05D006417 ORTHO05D008113 1.6e-10 68.9 60 73.3
Cre10.g438600 Chlamydomonas reinhardtii HOM05D006417 ORTHO05D008113 2.0e-10 68.6 62 64.5
ClCG11G012700 Citrullus lanatus HOM05D006417 ORTHO05D008113 7.3e-08 60.1 65 66.2
CAN.G710.59 Capsicum annuum HOM05D006417 ORTHO05D115303 3.6e-07 57.8 43 74.4


User provided reference genes

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